Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 1-452 |
| Cow position: | chr8:47670434-47670896 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 1-523 |
| Cow position: | chr8:19050464-19050981 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 2-234 |
| Cow position: | chr8:12664038-12663806 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 71 |
| Conread position: | 2-234 |
| Cow position: | chr8:45795766-45795531 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 227 |
| Conread position: | 2-490 |
| Cow position: | chr8:24876725-24876248 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 2-522 |
| Cow position: | chr8:46633415-46632892 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 38 |
| Conread position: | 3-234 |
| Cow position: | chr8:46945145-46944917 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 101 |
| Conread position: | 3-523 |
| Cow position: | chr8:3784689-3785215 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 454 |
| Conread position: | 4-168 |
| Cow position: | chr8:39160301-39160465 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 4-180 |
| Cow position: | chr8:26006787-26006607 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-194 |
| Cow position: | chr8:60060184-60060377 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-230 |
| Cow position: | chr8:29440847-29440617 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 4-233 |
| Cow position: | chr8:8904534-8904312 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 4-274 |
| Cow position: | chr8:44077037-44076768 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 4-290 |
| Cow position: | chr8:9264298-9264021 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 148 |
| Conread position: | 4-387 |
| Cow position: | chr8:8402219-8401829 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 4-423 |
| Cow position: | chr8:13735633-13736052 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 65 |
| Conread position: | 4-424 |
| Cow position: | chr8:53427308-53427729 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 212 |
| Conread position: | 4-427 |
| Cow position: | chr8:12716338-12716748 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 79 |
| Conread position: | 4-452 |
| Cow position: | chr8:25407428-25407881 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-458 |
| Cow position: | chr8:9540510-9540054 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 4-459 |
| Cow position: | chr8:27983818-27983352 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 294 |
| Conread position: | 4-461 |
| Cow position: | chr8:36637677-36637213 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-478 |
| Cow position: | chr8:11801215-11801695 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 311 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 213 |
| Conread position: | 4-493 |
| Cow position: | chr8:8910207-8910697 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 4-494 |
| Cow position: | chr8:47885006-47885506 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 211 |
| Conread position: | 4-501 |
| Cow position: | chr8:3857034-3856532 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-501 |
| Cow position: | chr8:25522378-25522885 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 4-501 |
| Cow position: | chr8:38390347-38390852 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-503 |
| Cow position: | chr8:39196236-39195731 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-508 |
| Cow position: | chr8:2171399-2170888 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 250 |
| Conread position: | 4-508 |
| Cow position: | chr8:8229804-8229290 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 456 |
| Conread position: | 4-508 |
| Cow position: | chr8:23770619-23771126 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 4-508 |
| Cow position: | chr8:24916357-24915846 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-508 |
| Cow position: | chr8:59262914-59262402 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 4-521 |
| Cow position: | chr8:10748360-10748880 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-523 |
| Cow position: | chr8:5016162-5016686 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr8:36636562-36636039 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-523 |
| Cow position: | chr8:45448432-45448964 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 4-523 |
| Cow position: | chr8:49214409-49214932 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-525 |
| Cow position: | chr8:4686375-4686900 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 4-529 |
| Cow position: | chr8:1319029-1319558 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 80 |
| Conread position: | 4-529 |
| Cow position: | chr8:45189073-45189596 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 215 |
| Conread position: | 4-531 |
| Cow position: | chr8:17310998-17311531 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-532 |
| Cow position: | chr8:42483907-42484425 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 352 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 4-532 |
| Cow position: | chr8:61035385-61034850 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 191 |
| Conread position: | 4-538 |
| Cow position: | chr8:1154328-1153785 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 460 |
| Conread position: | 4-538 |
| Cow position: | chr8:8518600-8518061 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 4-538 |
| Cow position: | chr8:8557156-8556626 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 4-538 |
| Cow position: | chr8:8656236-8655696 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 237 |
| Conread position: | 4-538 |
| Cow position: | chr8:9275002-9275533 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-538 |
| Cow position: | chr8:9735228-9735769 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr8:22572315-22571773 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr8:27578387-27578924 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-538 |
| Cow position: | chr8:32632043-32631505 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr8:47069827-47069283 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 5-503 |
| Cow position: | chr8:33588359-33588860 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-503 |
| Cow position: | chr8:50289170-50288665 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-508 |
| Cow position: | chr8:50993769-50994279 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 5-521 |
| Cow position: | chr8:45317142-45316620 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 84 |
| Conread position: | 5-523 |
| Cow position: | chr8:44244594-44244068 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 454 |
| Conread position: | 5-525 |
| Cow position: | chr8:23766406-23765899 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 175 |
| Conread position: | 6-542 |
| Cow position: | chr8:15688169-15687634 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 7-272 |
| Cow position: | chr8:44713325-44713049 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 9-523 |
| Cow position: | chr8:10743641-10743125 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 13-230 |
| Cow position: | chr8:36292159-36292377 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 14-521 |
| Cow position: | chr8:32930500-32931015 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 14-525 |
| Cow position: | chr8:11055865-11056374 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 94 |
| Conread position: | 15-532 |
| Cow position: | chr8:47074260-47074784 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 349 |
| Conread position: | 19-197 |
| Cow position: | chr8:38579297-38579116 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 171 |
| Conread position: | 40-544 |
| Cow position: | chr8:9135874-9135379 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 50-522 |
| Cow position: | chr8:13808628-13809101 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 50-523 |
| Cow position: | chr8:25776636-25776168 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 56-376 |
| Cow position: | chr8:8321560-8321235 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 230 |
| Conread position: | 77-248 |
| Cow position: | chr8:48371066-48371235 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 83-521 |
| Cow position: | chr8:42161659-42161231 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 111-508 |
| Cow position: | chr8:27925417-27925806 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 49 |
| Conread position: | 145-525 |
| Cow position: | chr8:47491697-47491325 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 54 |
| Conread position: | 152-530 |
| Cow position: | chr8:6065637-6065254 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 161-522 |
| Cow position: | chr8:21158677-21158313 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 180-523 |
| Cow position: | chr8:51327730-51328081 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 184-452 |
| Cow position: | chr8:60060545-60060818 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 218-477 |
| Cow position: | chr8:38578733-38578475 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 331-544 |
| Cow position: | chr8:19188147-19188365 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.