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Cow genome map

           
Conread name:
           
Pig2-127N17
        

               
Conread position:
               
85-381
               

               
Cow position:
               
chr11:50472635-50472340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr11:25791423-25791669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
138-403
               

               
Cow position:
               
chr11:6233611-6233879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr11:44223135-44222909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
187, 37
               

               
Conread position:
               
171-381
               

               
Cow position:
               
chr11:46314245-46314034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
172-403
               

               
Cow position:
               
chr11:46922656-46922885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
173-351
               

               
Cow position:
               
chr11:21637370-21637549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
175-381
               

               
Cow position:
               
chr11:38223562-38223764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
175-381
               

               
Cow position:
               
chr11:70600601-70600805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
179-379
               

               
Cow position:
               
chr11:40459330-40459133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
180-401
               

               
Cow position:
               
chr11:35724190-35723971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
183-377
               

               
Cow position:
               
chr11:21886049-21885861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
184-372
               

               
Cow position:
               
chr11:25721787-25721964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
185-363
               

               
Cow position:
               
chr11:36521098-36520921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
185-371
               

               
Cow position:
               
chr11:21508231-21508038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
185-373
               

               
Cow position:
               
chr11:44859064-44859255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
185-387
               

               
Cow position:
               
chr11:5218941-5219144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
186-373
               

               
Cow position:
               
chr11:62606638-62606448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr11:1932190-1931980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
187-408
               

               
Cow position:
               
chr11:42884563-42884790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
189-407
               

               
Cow position:
               
chr11:25783927-25783709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
191-373
               

               
Cow position:
               
chr11:42835740-42835919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr11:6429542-6429738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr11:40395644-40395458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
195-373
               

               
Cow position:
               
chr11:23278751-23278933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
196-354
               

               
Cow position:
               
chr11:22102550-22102704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
196-385
               

               
Cow position:
               
chr11:42064016-42064206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
196-386
               

               
Cow position:
               
chr11:80370323-80370132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
197-371
               

               
Cow position:
               
chr11:27248694-27248524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
197-385
               

               
Cow position:
               
chr11:5328994-5328804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
197-403
               

               
Cow position:
               
chr11:63498923-63499126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
199-372
               

               
Cow position:
               
chr11:37042176-37042004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
200-324
               

               
Cow position:
               
chr11:55830019-55830147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
200-370
               

               
Cow position:
               
chr11:8828210-8828040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
200-371
               

               
Cow position:
               
chr11:53651844-53651674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr11:63381993-63382167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr11:68570178-68570357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
200-388
               

               
Cow position:
               
chr11:62964701-62964509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 161
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr11:63977257-63977101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 6
               

               
Conread position:
               
201-370
               

               
Cow position:
               
chr11:81340339-81340506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
201-373
               

               
Cow position:
               
chr11:37099964-37100141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
201-403
               

               
Cow position:
               
chr11:38334723-38334524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
202-371
               

               
Cow position:
               
chr11:12742293-12742457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr11:48296229-48296062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
202-381
               

               
Cow position:
               
chr11:47837520-47837343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr11:897866-897674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
203-367
               

               
Cow position:
               
chr11:41133878-41134042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
203-373
               

               
Cow position:
               
chr11:6353009-6352840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
203-378
               

               
Cow position:
               
chr11:14470562-14470392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
203-379
               

               
Cow position:
               
chr11:66939390-66939567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
203-381
               

               
Cow position:
               
chr11:1980064-1980244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
203-387
               

               
Cow position:
               
chr11:36847371-36847184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
204-342
               

               
Cow position:
               
chr11:81043332-81043472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr11:65436417-65436257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
204-369
               

               
Cow position:
               
chr11:28078689-28078529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
204-370
               

               
Cow position:
               
chr11:32817613-32817782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr11:18119705-18119537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr11:70821247-70821078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:5264296-5264128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:18574654-18574824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:21590588-21590417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:30894801-30894972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:31228153-31227994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:35212971-35213136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:36092718-36092884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:36361441-36361611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:37435791-37435956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:42016435-42016608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:46329698-46329531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:63201460-63201285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:65431721-65431550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:73940360-73940532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:78380869-78381033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr11:78820350-78820182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr11:4411672-4411845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr11:6094201-6094379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr11:52690325-52690497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
204-385
               

               
Cow position:
               
chr11:53773883-53773700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr11:43914494-43914292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr11:47110455-47110272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr11:47784980-47784798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
205-403
               

               
Cow position:
               
chr11:52297022-52297220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
206-359
               

               
Cow position:
               
chr11:58021910-58022070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr11:4363718-4363882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr11:47638828-47638995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr11:49057581-49057423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr11:63695641-63695814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr11:46884572-46884374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr11:4443813-4443980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr11:40538745-40538584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
207-374
               

               
Cow position:
               
chr11:38879480-38879305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr11:76248243-76248073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
207-403
               

               
Cow position:
               
chr11:83043171-83043362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
207-406
               

               
Cow position:
               
chr11:47725086-47724896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
208-344
               

               
Cow position:
               
chr11:28850445-28850309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
208-352
               

               
Cow position:
               
chr11:70273657-70273511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 43
               

               
Conread position:
               
208-360
               

               
Cow position:
               
chr11:32586932-32587079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
208-365
               

               
Cow position:
               
chr11:75479827-75479984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chr11:1625025-1625185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:25614607-25614782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:27747114-27746955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:36182887-36182726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:46747663-46747829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:51683413-51683247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:62004274-62004439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:73977095-73977269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr11:74839799-74839638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr11:35544282-35544110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr11:66188125-66188292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:7651867-7652043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:26143903-26144072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:30370301-30370128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:33369348-33369174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:38236441-38236275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:69168784-69168610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:83028188-83028017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr11:87171880-87172053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr11:32054989-32055164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
170, 99
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr11:46245663-46245846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr11:81065855-81066031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr11:5961503-5961319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
208-402
               

               
Cow position:
               
chr11:29960489-29960300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr11:8437492-8437693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr11:15772518-15772711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr11:32254020-32254216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr11:63998891-63999091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr11:76890237-76890046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
208-417
               

               
Cow position:
               
chr11:52380678-52380887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
209-314
               

               
Cow position:
               
chr11:63926703-63926599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
209-333
               

               
Cow position:
               
chr11:22720191-22720061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr11:31525461-31525585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
209-346
               

               
Cow position:
               
chr11:43736909-43737049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
209-349
               

               
Cow position:
               
chr11:33729509-33729646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
209-350
               

               
Cow position:
               
chr11:81167836-81167978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
209-360
               

               
Cow position:
               
chr11:6258890-6259042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr11:39060407-39060566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr11:48086116-48085956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
209-370
               

               
Cow position:
               
chr11:42837211-42837050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 107
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr11:17369720-17369564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr11:30165706-30165543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr11:71303774-71303612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 101
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:4621240-4621399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:7500944-7500780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:15591285-15591443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:24438024-24438187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
111, 123
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:30172494-30172336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:32260727-32260565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:35140114-35139940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:35347556-35347721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:45742563-45742405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:49210621-49210790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:69978161-69978002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr11:80007864-80008036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr11:5559478-5559309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr11:6581029-6580860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr11:37565065-37564901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr11:42236084-42236254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr11:62102250-62102423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr11:19591801-19591971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr11:44176786-44176619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr11:46010064-46010230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr11:55334117-55333933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr11:79666067-79666238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr11:30638757-30638927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr11:10876474-10876297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr11:10956679-10956854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr11:72871092-72870923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
209-387
               

               
Cow position:
               
chr11:19147947-19148120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
209-387
               

               
Cow position:
               
chr11:20234881-20234701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-387
               

               
Cow position:
               
chr11:56311405-56311579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 120
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr11:67537921-67538110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr11:2084341-2084145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr11:40608398-40608592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:27913481-27913285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:42084478-42084675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:55053058-55052872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:62239936-62239745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:70483656-70483851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 99
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr11:77758563-77758760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr11:75285561-75285766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
210-296
               

               
Cow position:
               
chr11:50197317-50197404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
210-340
               

               
Cow position:
               
chr11:80824097-80823974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr11:68592213-68592072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr11:33271623-33271465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 104
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr11:14492373-14492537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:5231453-5231614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:7874335-7874170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:15017252-15017088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:15369583-15369419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 112
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:17552885-17553049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:48383724-48383552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:48660124-48659966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr11:53510301-53510471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr11:41141079-41140914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr11:41213246-41213076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
210-378
               

               
Cow position:
               
chr11:30494182-30494021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
210-379
               

               
Cow position:
               
chr11:82725373-82725199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr11:13863906-13864081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr11:13940381-13940209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
210-385
               

               
Cow position:
               
chr11:3715433-3715258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
210-400
               

               
Cow position:
               
chr11:34778247-34778440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr11:41278381-41278187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr11:36917571-36917776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr11:27404877-27405078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 145
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr11:32126810-32126605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
211-314
               

               
Cow position:
               
chr11:59744189-59744086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-355
               

               
Cow position:
               
chr11:4436527-4436384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
211-355
               

               
Cow position:
               
chr11:38643737-38643591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
211-365
               

               
Cow position:
               
chr11:4390096-4389941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
211-366
               

               
Cow position:
               
chr11:38656989-38657145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
211-368
               

               
Cow position:
               
chr11:7928870-7928710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
211-370
               

               
Cow position:
               
chr11:24551584-24551425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 147
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr11:20762045-20761876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 144
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr11:36104512-36104346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr11:64126406-64126244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
211-372
               

               
Cow position:
               
chr11:30857228-30857070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr11:1485667-1485829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr11:25604147-25603979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr11:62620569-62620408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
211-374
               

               
Cow position:
               
chr11:4653068-4653224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr11:23407654-23407492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
211-379
               

               
Cow position:
               
chr11:36194487-36194322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr11:19578829-19578991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr11:49207901-49207734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:1067246-1067416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:5176187-5176353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:59471297-59471125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:62230381-62230204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:62742454-62742622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:77241895-77241728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr11:83398101-83397929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr11:10563198-10563027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
211-401
               

               
Cow position:
               
chr11:2874595-2874400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
211-401
               

               
Cow position:
               
chr11:26066996-26067181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
167, 45
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr11:67614732-67614921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr11:81614330-81614513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
212-316
               

               
Cow position:
               
chr11:46784655-46784551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-329
               

               
Cow position:
               
chr11:41306213-41306331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
212-366
               

               
Cow position:
               
chr11:26823304-26823148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr11:18852090-18851940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr11:22884597-22884444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr11:40818441-40818603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr11:47412035-47411864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr11:63435714-63435544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
212-382
               

               
Cow position:
               
chr11:81041769-81041947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
212-385
               

               
Cow position:
               
chr11:72443306-72443131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr11:6399872-6400056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 140
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr11:10066541-10066351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr11:10095535-10095339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 96
               

               
Conread position:
               
213-355
               

               
Cow position:
               
chr11:65939671-65939813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
213-370
               

               
Cow position:
               
chr11:66099666-66099828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr11:17889536-17889695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr11:35924253-35924094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr11:41123406-41123565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-372
               

               
Cow position:
               
chr11:62789321-62789163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:4225281-4225122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:6245512-6245346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:17676184-17676341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:32800818-32800657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:54428811-54428650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:59024162-59024328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:63975325-63975161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:67931300-67931461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr11:86664590-86664750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 139
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr11:23220551-23220390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr11:49396334-49396501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr11:74152557-74152730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:6319938-6320109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:8670208-8670035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:13500201-13500039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:25968662-25968830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 156
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:33414431-33414260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:49486980-49486802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:55636033-55636202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:62204845-62204677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:64781279-64781110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:73983799-73983980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:76896182-76896351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr11:80893973-80893804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
213-382
               

               
Cow position:
               
chr11:36058989-36058819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-385
               

               
Cow position:
               
chr11:70422404-70422575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
213-386
               

               
Cow position:
               
chr11:49153131-49152967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 84
               

               
Conread position:
               
213-386
               

               
Cow position:
               
chr11:60296929-60296748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
213-387
               

               
Cow position:
               
chr11:45619541-45619369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
213-402
               

               
Cow position:
               
chr11:2484605-2484793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:3715013-3714821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:8259268-8259076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:16315065-16314873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:34968422-34968613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 149
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:37804361-37804553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr11:55744660-55744468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
213-406
               

               
Cow position:
               
chr11:8496224-8496030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 128
               

               
Conread position:
               
213-406
               

               
Cow position:
               
chr11:48672905-48672710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-408
               

               
Cow position:
               
chr11:45553663-45553461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-417
               

               
Cow position:
               
chr11:30964537-30964330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
214-368
               

               
Cow position:
               
chr11:39462809-39462660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
214-369
               

               
Cow position:
               
chr11:1265353-1265508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
214-373
               

               
Cow position:
               
chr11:36940404-36940564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
214-374
               

               
Cow position:
               
chr11:74427869-74427708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr11:6643005-6642840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr11:15382306-15382475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:1380868-1380699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:12555115-12555282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:26057457-26057627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:30708694-30708530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:40792504-40792681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:44620143-44619978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:45350320-45350488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:58594196-58594364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:63849760-63849928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:66041462-66041302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:75749656-75749503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr11:85571616-85571782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr11:32710705-32710537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr11:62811486-62811309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr11:57767380-57767191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr11:81138403-81138212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
215-338
               

               
Cow position:
               
chr11:83042051-83042176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-363
               

               
Cow position:
               
chr11:23278965-23279116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
215-370
               

               
Cow position:
               
chr11:63491208-63491052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
215-372
               

               
Cow position:
               
chr11:68909665-68909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
215-372
               

               
Cow position:
               
chr11:80923136-80923291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr11:69417592-69417433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr11:69421516-69421681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
215-377
               

               
Cow position:
               
chr11:258983-259144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
215-377
               

               
Cow position:
               
chr11:15366787-15366945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr11:34644847-34644678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr11:35732894-35733060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr11:65495155-65495316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 77
               

               
Conread position:
               
215-385
               

               
Cow position:
               
chr11:19657026-19657195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr11:77745058-77745235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr11:7427745-7427938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 181
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr11:49872698-49872884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
216-372
               

               
Cow position:
               
chr11:49192267-49192425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:20117265-20117106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:31866767-31866613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:44016433-44016275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:47310796-47310954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:68883908-68883750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr11:73638044-73637886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
216-379
               

               
Cow position:
               
chr11:19487291-19487455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr11:9237660-9237828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr11:42498032-42497863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr11:26442315-26442498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr11:5433454-5433273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 82
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr11:2788583-2788394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr11:5417074-5416885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr11:29308770-29308581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
217-373
               

               
Cow position:
               
chr11:56115124-56114972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr11:73573834-73573661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr11:84385453-84385638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
218-350
               

               
Cow position:
               
chr11:36136294-36136159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
218-367
               

               
Cow position:
               
chr11:2830842-2830694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
218-367
               

               
Cow position:
               
chr11:9087931-9088079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr11:56288731-56288578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
218-372
               

               
Cow position:
               
chr11:71192159-71192003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr11:15881234-15881389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr11:67615066-67615215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
218-374
               

               
Cow position:
               
chr11:39002-38843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr11:1932302-1932464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
218-380
               

               
Cow position:
               
chr11:21830025-21830185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr11:3740150-3739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr11:19247019-19247176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr11:53817041-53816876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr11:68913329-68913164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chr11:6594043-6594221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chr11:13592925-13592754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr11:26535970-26535788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr11:30322308-30322492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr11:41980018-41980206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr11:86895558-86895377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 81
               

               
Conread position:
               
218-410
               

               
Cow position:
               
chr11:5486202-5486007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr11:84228537-84228729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 78
               

               
Conread position:
               
219-351
               

               
Cow position:
               
chr11:60488467-60488332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
219-355
               

               
Cow position:
               
chr11:64029082-64029217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
219-381
               

               
Cow position:
               
chr11:67208434-67208276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
219-385
               

               
Cow position:
               
chr11:7560186-7560018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
219-387
               

               
Cow position:
               
chr11:41985863-41986029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 85
               

               
Conread position:
               
219-401
               

               
Cow position:
               
chr11:72292746-72292555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
219-403
               

               
Cow position:
               
chr11:53778805-53778617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
220-355
               

               
Cow position:
               
chr11:53460882-53460746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 96
               

               
Conread position:
               
220-372
               

               
Cow position:
               
chr11:53888465-53888617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 145
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr11:11483505-11483343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr11:20238860-20238708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr11:36300400-36300550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr11:43641572-43641418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr11:65157221-65157376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
220-377
               

               
Cow position:
               
chr11:74316890-74316737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:27907954-27907800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:29659743-29659583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:34279920-34279766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:46427223-46427384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:63165467-63165623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:81175782-81175620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 90
               

               
Conread position:
               
220-385
               

               
Cow position:
               
chr11:6006493-6006331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
220-388
               

               
Cow position:
               
chr11:32108504-32108673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr11:80296675-80296850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr11:17721617-17721801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 85
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr11:18924931-18924746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr11:65762401-65762590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
220-405
               

               
Cow position:
               
chr11:50152629-50152817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 96
               

               
Conread position:
               
221-365
               

               
Cow position:
               
chr11:80695058-80695203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr11:12768579-12768432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr11:42183222-42183065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr11:62812769-62812916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:30986819-30986670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
106, 76
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:41215916-41215764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
106, 45
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:42067047-42066896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:42291657-42291807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:63484123-63483974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr11:71814885-71814738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr11:35351850-35352010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
221-381
               

               
Cow position:
               
chr11:18508845-18509007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
221-381
               

               
Cow position:
               
chr11:48315216-48315373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
221-381
               

               
Cow position:
               
chr11:77208270-77208098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
221-422
               

               
Cow position:
               
chr11:42206599-42206402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr11:25119754-25119898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr11:63407876-63407727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr11:63475489-63475649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
222-403
               

               
Cow position:
               
chr11:65826572-65826750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
223-349
               

               
Cow position:
               
chr11:43594247-43594373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
223-370
               

               
Cow position:
               
chr11:53486979-53487119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
223-371
               

               
Cow position:
               
chr11:9691190-9691038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
223-403
               

               
Cow position:
               
chr11:29786312-29786498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr11:62889712-62889870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr11:9836275-9836456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr11:21843960-21844105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 80
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr11:30209644-30209799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr11:30485836-30485675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr11:32782695-32782860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr11:46999165-46999002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr11:63485111-63484961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
225-403
               

               
Cow position:
               
chr11:67312964-67312781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
226-373
               

               
Cow position:
               
chr11:64096489-64096634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
226-395
               

               
Cow position:
               
chr11:80564475-80564302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
226-401
               

               
Cow position:
               
chr11:5935939-5936113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
227-361
               

               
Cow position:
               
chr11:899613-899477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
227-373
               

               
Cow position:
               
chr11:85985872-85986018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 78
               

               
Conread position:
               
227-376
               

               
Cow position:
               
chr11:18910706-18910854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
229-380
               

               
Cow position:
               
chr11:13042973-13043121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr11:36920404-36920553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
230-403
               

               
Cow position:
               
chr11:60720280-60720455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
230-410
               

               
Cow position:
               
chr11:5454520-5454702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
231-380
               

               
Cow position:
               
chr11:21173264-21173413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
231-380
               

               
Cow position:
               
chr11:26343275-26343126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
232-377
               

               
Cow position:
               
chr11:8544845-8544990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
233-347
               

               
Cow position:
               
chr11:67417980-67417866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
233-368
               

               
Cow position:
               
chr11:35109369-35109501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
233-371
               

               
Cow position:
               
chr11:2836031-2835892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
233-377
               

               
Cow position:
               
chr11:27760689-27760545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
233-385
               

               
Cow position:
               
chr11:30600019-30600173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
235-371
               

               
Cow position:
               
chr11:34144750-34144891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
235-381
               

               
Cow position:
               
chr11:39854853-39854994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
237-370
               

               
Cow position:
               
chr11:2281156-2281290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
237-381
               

               
Cow position:
               
chr11:78672838-78672694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
238-371
               

               
Cow position:
               
chr11:81406001-81406133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
238-403
               

               
Cow position:
               
chr11:8683912-8684079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
240-373
               

               
Cow position:
               
chr11:31875258-31875124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
242-374
               

               
Cow position:
               
chr11:63202085-63202218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
242-381
               

               
Cow position:
               
chr11:71868442-71868579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
243-373
               

               
Cow position:
               
chr11:38670851-38670713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
250-407
               

               
Cow position:
               
chr11:34136395-34136237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
251-377
               

               
Cow position:
               
chr11:87155674-87155547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
252-381
               

               
Cow position:
               
chr11:17807809-17807939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr11:76835496-76835628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.