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Cow genome map

           
Conread name:
           
Pig2-127N17
        

               
Conread position:
               
154-372
               

               
Cow position:
               
chr17:12306093-12306306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
163-380
               

               
Cow position:
               
chr17:20913406-20913193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 144
               

               
Conread position:
               
167-403
               

               
Cow position:
               
chr17:24974234-24974000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 6
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr17:12201079-12200875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
173-407
               

               
Cow position:
               
chr17:11920872-11921110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr17:14668791-14668592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
175-358
               

               
Cow position:
               
chr17:12248947-12249131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
182-374
               

               
Cow position:
               
chr17:10630700-10630894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
185-371
               

               
Cow position:
               
chr17:21972853-21973038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
187-371
               

               
Cow position:
               
chr17:34371813-34371998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
187-397
               

               
Cow position:
               
chr17:3389112-3388891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
191-403
               

               
Cow position:
               
chr17:26225301-26225086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr17:17035214-17035008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
195-373
               

               
Cow position:
               
chr17:17822356-17822180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
196-333
               

               
Cow position:
               
chr17:44797944-44797806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
196-403
               

               
Cow position:
               
chr17:5012801-5013017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr17:31480767-31480963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr17:24559557-24559345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
198-373
               

               
Cow position:
               
chr17:36573856-36574033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr17:30713607-30713404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
198-417
               

               
Cow position:
               
chr17:4105729-4105951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
198-417
               

               
Cow position:
               
chr17:4121464-4121687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
199-344
               

               
Cow position:
               
chr17:8931509-8931654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
199-403
               

               
Cow position:
               
chr17:20929505-20929300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
199-406
               

               
Cow position:
               
chr17:41617001-41616790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
200-365
               

               
Cow position:
               
chr17:22772862-22773029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
200-373
               

               
Cow position:
               
chr17:21806185-21806362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
200-373
               

               
Cow position:
               
chr17:29995174-29995346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 107
               

               
Conread position:
               
201-344
               

               
Cow position:
               
chr17:39253383-39253528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
201-381
               

               
Cow position:
               
chr17:30359714-30359540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
202-364
               

               
Cow position:
               
chr17:32968712-32968876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
202-402
               

               
Cow position:
               
chr17:6761594-6761788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr17:21718735-21718938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
203-403
               

               
Cow position:
               
chr17:9824925-9824728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
204-338
               

               
Cow position:
               
chr17:25815853-25815717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr17:19899158-19898984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr17:21738607-21738782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr17:28468384-28468212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr17:31985681-31985851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr17:35149270-35149444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr17:3387976-3387799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr17:4817787-4817609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr17:7959437-7959263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr17:26880285-26880453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr17:27795912-27795736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr17:12959355-12959165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr17:14652526-14652721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
205-359
               

               
Cow position:
               
chr17:4679953-4680107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr17:24029983-24030142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr17:25342481-25342651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr17:35051875-35051704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
205-379
               

               
Cow position:
               
chr17:21677905-21678074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr17:29026334-29026154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr17:30665529-30665354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr17:34078855-34079029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
206-402
               

               
Cow position:
               
chr17:31037125-31037317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
207-371
               

               
Cow position:
               
chr17:9854237-9854068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
207-371
               

               
Cow position:
               
chr17:42150643-42150483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr17:15883929-15883753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
207-402
               

               
Cow position:
               
chr17:12325518-12325705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
208-368
               

               
Cow position:
               
chr17:5761894-5762059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
208-370
               

               
Cow position:
               
chr17:17418730-17418567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
208-372
               

               
Cow position:
               
chr17:34860626-34860469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr17:25612339-25612180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr17:10508181-10508351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr17:21744188-21744014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr17:23280604-23280772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr17:30108683-30108521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr17:41009525-41009354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr17:4264481-4264300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr17:12109061-12108881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr17:14024375-14024554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
208-387
               

               
Cow position:
               
chr17:18146444-18146260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
209-302
               

               
Cow position:
               
chr17:35127228-35127133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
209-345
               

               
Cow position:
               
chr17:41144134-41144265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
209-363
               

               
Cow position:
               
chr17:20887277-20887121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr17:3468003-3467847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr17:9900155-9899997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr17:12946108-12946257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr17:6318615-6318773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
209-370
               

               
Cow position:
               
chr17:3883490-3883652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr17:9965769-9965935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr17:20801066-20800905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr17:42419957-42419801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr17:28982430-28982270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:9260359-9260522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:17782304-17782145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:24877358-24877194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:27606768-27606607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:27886595-27886756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:34790813-34790974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:36467936-36468101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:36791375-36791216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:42780067-42780234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:43315038-43315198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr17:45135662-45135818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr17:17044079-17044246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr17:18818814-18818653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr17:40276987-40276826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
209-378
               

               
Cow position:
               
chr17:21466006-21466178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr17:6787191-6787019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:7571359-7571185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:12289159-12289327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:15355186-15355013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:24898457-24898282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:25467244-25467064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:30977269-30977102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:34768201-34768375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr17:21599428-21599606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr17:26631555-26631734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr17:44798689-44798862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
169, 120
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr17:5048182-5048006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr17:11994768-11994951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr17:36943615-36943443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr17:21039811-21039617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr17:15102637-15102835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr17:17222595-17222399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr17:21325596-21325391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr17:25126596-25126409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr17:39964130-39963936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 120
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr17:43323290-43323490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
209-411
               

               
Cow position:
               
chr17:5179515-5179312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
210-366
               

               
Cow position:
               
chr17:24116865-24116706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr17:20157859-20157699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr17:10037661-10037498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr17:15020403-15020560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr17:9770756-9770593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr17:19543981-19544142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr17:25118138-25117974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr17:1463077-1463249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr17:5898270-5898445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr17:16371514-16371338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr17:20359364-20359194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
210-382
               

               
Cow position:
               
chr17:5038804-5038970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
210-385
               

               
Cow position:
               
chr17:7732866-7733041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr17:27646874-27647066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr17:32993375-32993565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr17:35193566-35193761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr17:25709966-25709764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
211-360
               

               
Cow position:
               
chr17:25608267-25608417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
211-365
               

               
Cow position:
               
chr17:20782947-20783096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
211-368
               

               
Cow position:
               
chr17:32962413-32962571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
211-369
               

               
Cow position:
               
chr17:18673787-18673946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
211-370
               

               
Cow position:
               
chr17:1025585-1025732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr17:1634245-1634402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr17:8815440-8815282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr17:25800634-25800791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
211-374
               

               
Cow position:
               
chr17:30493907-30494071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
211-379
               

               
Cow position:
               
chr17:7865075-7864908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr17:7802922-7803093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr17:11269524-11269693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 130
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr17:18708367-18708529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr17:20848778-20848604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr17:36814615-36814443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr17:7037369-7037547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr17:21015237-21015063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr17:12556799-12556609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
211-396
               

               
Cow position:
               
chr17:33154908-33155088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
211-397
               

               
Cow position:
               
chr17:40673623-40673435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr17:12215003-12215197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 187
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr17:19471522-19471712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr17:32143339-32143145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr17:32989724-32989535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
212-370
               

               
Cow position:
               
chr17:33321718-33321877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
102, 87
               

               
Conread position:
               
212-371
               

               
Cow position:
               
chr17:11664326-11664491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
212-372
               

               
Cow position:
               
chr17:17265882-17266042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr17:20881566-20881719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr17:21003582-21003739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 90
               

               
Conread position:
               
212-377
               

               
Cow position:
               
chr17:15103493-15103654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr17:25121999-25122162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
212-387
               

               
Cow position:
               
chr17:27292205-27292382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr17:9077963-9078162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
212-404
               

               
Cow position:
               
chr17:25474883-25474690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
213-346
               

               
Cow position:
               
chr17:4271111-4271246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
213-348
               

               
Cow position:
               
chr17:22223962-22223830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
213-364
               

               
Cow position:
               
chr17:952401-952250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr17:10825724-10825572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr17:11618836-11618676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr17:21181702-21181543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr17:31736254-31736414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr17:9509744-9509910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr17:10221959-10222127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr17:11932582-11932414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:1035346-1035515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:17180293-17180125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:20884773-20884605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:25875643-25875477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:26000367-26000199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr17:27258675-27258504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
213-382
               

               
Cow position:
               
chr17:20092881-20093045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
213-396
               

               
Cow position:
               
chr17:21236773-21236588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:11839971-11839781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:13414117-13414309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:21076021-21075832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
161, 108
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:21863907-21863715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:26072510-26072702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:27730794-27730602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr17:36454530-36454721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-404
               

               
Cow position:
               
chr17:36178802-36178984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
213-407
               

               
Cow position:
               
chr17:25584492-25584297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr17:35935408-35935259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
214-366
               

               
Cow position:
               
chr17:24612891-24612747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
214-373
               

               
Cow position:
               
chr17:18720206-18720357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
214-373
               

               
Cow position:
               
chr17:33164573-33164729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr17:4699464-4699632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr17:14049963-14050125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr17:26231212-26231036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr17:26836518-26836685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
214-387
               

               
Cow position:
               
chr17:6767011-6767186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
214-387
               

               
Cow position:
               
chr17:23063969-23063795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
214-391
               

               
Cow position:
               
chr17:13297632-13297451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 119
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr17:25473035-25473221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr17:26233580-26233771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
215-364
               

               
Cow position:
               
chr17:7659351-7659505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
215-369
               

               
Cow position:
               
chr17:25128108-25128259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
215-371
               

               
Cow position:
               
chr17:17410546-17410385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr17:3364835-3364680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr17:27565809-27565649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr17:32349309-32349157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
215-377
               

               
Cow position:
               
chr17:1081454-1081290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-377
               

               
Cow position:
               
chr17:40639193-40639033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
215-377
               

               
Cow position:
               
chr17:44234491-44234336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 71
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr17:5288410-5288248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr17:11215647-11215810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr17:25189533-25189367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr17:32027200-32027370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr17:31563438-31563623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr17:908985-908799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr17:24824492-24824301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr17:24928724-24928534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr17:40355507-40355317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
216-379
               

               
Cow position:
               
chr17:13940073-13940238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
216-380
               

               
Cow position:
               
chr17:21363629-21363464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr17:10478050-10477879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr17:20032663-20032835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr17:31231712-31231884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr17:14004069-14003901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
216-387
               

               
Cow position:
               
chr17:22128167-22127997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr17:11055922-11056101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 96
               

               
Conread position:
               
217-355
               

               
Cow position:
               
chr17:4786237-4786381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr17:15303729-15303894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr17:5012085-5011919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr17:34188123-34187957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
217-401
               

               
Cow position:
               
chr17:24613469-24613277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
218-359
               

               
Cow position:
               
chr17:33067325-33067466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
218-364
               

               
Cow position:
               
chr17:30156177-30156322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr17:32220639-32220794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr17:11397910-11397756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr17:12963371-12963517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr17:37973815-37973981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr17:32978694-32978851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chr17:15154641-15154813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr17:22081280-22081457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
219-371
               

               
Cow position:
               
chr17:24587865-24587716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
219-385
               

               
Cow position:
               
chr17:18202003-18201834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
219-396
               

               
Cow position:
               
chr17:22189673-22189501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
219-402
               

               
Cow position:
               
chr17:21677133-21676950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
219-403
               

               
Cow position:
               
chr17:20071861-20072040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
220-354
               

               
Cow position:
               
chr17:37340790-37340922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
220-368
               

               
Cow position:
               
chr17:3153327-3153479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 140
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr17:24987443-24987296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
109, 80
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr17:31559812-31559661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr17:35457577-35457723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr17:1562550-1562697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr17:5280409-5280565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr17:24751153-24751004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr17:25702845-25702691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr17:26849527-26849680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
220-377
               

               
Cow position:
               
chr17:946597-946443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 82
               

               
Conread position:
               
220-380
               

               
Cow position:
               
chr17:14025665-14025827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr17:26183588-26183426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:7810505-7810696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:9932070-9932241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 85
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:20022273-20022455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:25511484-25511304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:26757203-26757389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr17:33933507-33933686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
220-408
               

               
Cow position:
               
chr17:28795739-28795929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
221-336
               

               
Cow position:
               
chr17:20930543-20930431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
221-341
               

               
Cow position:
               
chr17:3517476-3517596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
221-370
               

               
Cow position:
               
chr17:24947575-24947426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr17:25513878-25514031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr17:8663747-8663594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr17:22241248-22241094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr17:30728747-30728594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
221-377
               

               
Cow position:
               
chr17:20836330-20836176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
221-377
               

               
Cow position:
               
chr17:32418877-32419030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:10016517-10016338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 84
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:24895317-24895132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:30513771-30513946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:32332852-32333032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:35043695-35043865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
221-417
               

               
Cow position:
               
chr17:32471550-32471738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
222-373
               

               
Cow position:
               
chr17:32278665-32278816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
222-373
               

               
Cow position:
               
chr17:32280907-32280756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
222-378
               

               
Cow position:
               
chr17:3541947-3541794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
223-348
               

               
Cow position:
               
chr17:2729679-2729803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
223-373
               

               
Cow position:
               
chr17:20199115-20199260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr17:30737688-30737525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr17:43957899-43957742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
224-371
               

               
Cow position:
               
chr17:1466179-1466325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr17:21114718-21114895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr17:31754534-31754716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
225-344
               

               
Cow position:
               
chr17:24826847-24826967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr17:11912269-11912413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 80
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr17:24111367-24111512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
225-380
               

               
Cow position:
               
chr17:5344855-5344700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
225-380
               

               
Cow position:
               
chr17:40741890-40741735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr17:20992802-20992960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
225-402
               

               
Cow position:
               
chr17:7711672-7711497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
225-402
               

               
Cow position:
               
chr17:25901444-25901260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
225-402
               

               
Cow position:
               
chr17:26448779-26448602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
226-372
               

               
Cow position:
               
chr17:9801713-9801566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
227-369
               

               
Cow position:
               
chr17:17772184-17772331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
227-370
               

               
Cow position:
               
chr17:30750283-30750137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
227-373
               

               
Cow position:
               
chr17:24862689-24862548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
227-381
               

               
Cow position:
               
chr17:11362410-11362256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
228-380
               

               
Cow position:
               
chr17:25095719-25095564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
229-373
               

               
Cow position:
               
chr17:32138184-32138334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
230-377
               

               
Cow position:
               
chr17:5349892-5350038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
230-403
               

               
Cow position:
               
chr17:26789646-26789478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
231-417
               

               
Cow position:
               
chr17:28529085-28528901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
232-386
               

               
Cow position:
               
chr17:38483565-38483721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
232-403
               

               
Cow position:
               
chr17:5027235-5027401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
233-373
               

               
Cow position:
               
chr17:21777956-21777816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
233-373
               

               
Cow position:
               
chr17:24773904-24773769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
233-377
               

               
Cow position:
               
chr17:21910303-21910446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
233-379
               

               
Cow position:
               
chr17:13290945-13291092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
235-381
               

               
Cow position:
               
chr17:6329338-6329197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
236-377
               

               
Cow position:
               
chr17:34806438-34806581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
241-381
               

               
Cow position:
               
chr17:2810855-2810714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
258-381
               

               
Cow position:
               
chr17:8660400-8660277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-411
               

               
Cow position:
               
chr17:1492951-1493101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               
Show alignments to all cow chromosomes.