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Cow genome map

           
Conread name:
           
Pig2-127N17
        

               
Conread position:
               
135-375
               

               
Cow position:
               
chr28:24767695-24767456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr28:8304490-8304301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
179-373
               

               
Cow position:
               
chr28:24646830-24646645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
180-385
               

               
Cow position:
               
chr28:3475434-3475230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
182-374
               

               
Cow position:
               
chr28:13356120-13356318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
184-366
               

               
Cow position:
               
chr28:133836-134025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
188-373
               

               
Cow position:
               
chr28:16918938-16919115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
189-403
               

               
Cow position:
               
chr28:12598575-12598362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
190-373
               

               
Cow position:
               
chr28:11059729-11059554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr28:4834611-4834788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr28:17943956-17943784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
193-373
               

               
Cow position:
               
chr28:4307660-4307843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr28:3445247-3445456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
195-371
               

               
Cow position:
               
chr28:4884022-4884197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
196-381
               

               
Cow position:
               
chr28:13370911-13371101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
199-372
               

               
Cow position:
               
chr28:5255099-5254929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr28:25973767-25973580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
200-314
               

               
Cow position:
               
chr28:14934225-14934112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
200-372
               

               
Cow position:
               
chr28:3406185-3406360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
200-373
               

               
Cow position:
               
chr28:18770313-18770134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr28:4282264-4282445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 116
               

               
Conread position:
               
200-385
               

               
Cow position:
               
chr28:12628965-12628777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
201-373
               

               
Cow position:
               
chr28:19994720-19994896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
201-403
               

               
Cow position:
               
chr28:4007004-4006807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
202-334
               

               
Cow position:
               
chr28:27941559-27941690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
202-359
               

               
Cow position:
               
chr28:5428536-5428686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr28:25057181-25057020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
202-377
               

               
Cow position:
               
chr28:10252690-10252867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
202-386
               

               
Cow position:
               
chr28:19564012-19564188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
203-378
               

               
Cow position:
               
chr28:22346244-22346070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
203-398
               

               
Cow position:
               
chr28:21845173-21844986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
203-406
               

               
Cow position:
               
chr28:26826450-26826239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
204-348
               

               
Cow position:
               
chr28:19127950-19128096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
204-360
               

               
Cow position:
               
chr28:15411903-15411747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
204-370
               

               
Cow position:
               
chr28:5262742-5262572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr28:4163359-4163527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:3449531-3449357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:6301305-6301135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:11866447-11866611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 83
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:19015922-19015760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:29500631-29500454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr28:11305411-11305583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr28:19395085-19394921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr28:21103599-21103778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
204-379
               

               
Cow position:
               
chr28:21766176-21766003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr28:19038794-19038972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr28:21744935-21744762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr28:4022892-4022719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr28:7697758-7697936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr28:7964459-7964632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr28:20281968-20281804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
204-382
               

               
Cow position:
               
chr28:5818060-5817887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
204-384
               

               
Cow position:
               
chr28:21118902-21118720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr28:5630321-5630121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
205-370
               

               
Cow position:
               
chr28:11411316-11411477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
205-404
               

               
Cow position:
               
chr28:26867934-26868128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr28:4089840-4089997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr28:23728089-23728246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr28:7557509-7557711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr28:5577748-5577583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr28:4643553-4643724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
207-400
               

               
Cow position:
               
chr28:28601347-28601155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
171, 157
               

               
Conread position:
               
207-403
               

               
Cow position:
               
chr28:11814861-11815055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr28:23296536-23296378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 91
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr28:26820059-26820223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 153
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr28:3759214-3759044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr28:751444-751275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr28:26304284-26304111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr28:5674089-5673921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr28:34430206-34430382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 108
               

               
Conread position:
               
208-402
               

               
Cow position:
               
chr28:11079515-11079326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr28:10845320-10845131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr28:15362795-15362602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 91
               

               
Conread position:
               
209-327
               

               
Cow position:
               
chr28:19345696-19345579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
209-347
               

               
Cow position:
               
chr28:18761792-18761930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr28:2821477-2821314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr28:14657932-14657769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:777893-777729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:3484803-3484634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:4077121-4077292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:10606423-10606580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:21008456-21008612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr28:34830370-34830208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
209-374
               

               
Cow position:
               
chr28:20124997-20124838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
209-376
               

               
Cow position:
               
chr28:14947932-14947767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr28:1654875-1655048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr28:7644963-7644786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr28:8347950-8347777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr28:8359117-8358943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr28:16200523-16200697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr28:13048062-13048239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr28:5200043-5199865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr28:12400458-12400265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr28:3678575-3678385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr28:4071174-4070992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr28:9636241-9636434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr28:10615734-10615923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr28:6283274-6283468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
120, 46
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr28:5144297-5144502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
209-412
               

               
Cow position:
               
chr28:11828744-11828947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
209-421
               

               
Cow position:
               
chr28:9677878-9677678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr28:8164998-8165139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr28:20759478-20759647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr28:5273212-5273380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr28:11798561-11798729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr28:659072-659249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr28:4881034-4881194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr28:5232156-5231984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr28:19024665-19024479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
210-382
               

               
Cow position:
               
chr28:11239097-11239275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr28:10959014-10958825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
210-417
               

               
Cow position:
               
chr28:17740039-17739832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
211-361
               

               
Cow position:
               
chr28:5294788-5294936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr28:3311006-3311168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr28:4876652-4876496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr28:5436872-5437031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 141
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr28:26960699-26960855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr28:27445361-27445526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr28:3200676-3200505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr28:28903345-28903514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr28:11197458-11197634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
211-386
               

               
Cow position:
               
chr28:18791248-18791079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr28:5552490-5552692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
212-370
               

               
Cow position:
               
chr28:22278412-22278575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
212-371
               

               
Cow position:
               
chr28:6358197-6358358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr28:9109425-9109270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr28:11307305-11307464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr28:27787777-27787620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
212-376
               

               
Cow position:
               
chr28:10480588-10480756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr28:117545-117717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr28:5103375-5103565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
212-404
               

               
Cow position:
               
chr28:13245777-13245583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
212-491
               

               
Cow position:
               
chr28:118827-118544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
213-368
               

               
Cow position:
               
chr28:23676528-23676372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-369
               

               
Cow position:
               
chr28:10978051-10977900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
213-369
               

               
Cow position:
               
chr28:13133847-13133690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr28:10495088-10495245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:8787751-8787594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:8827376-8827214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:16159658-16159817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 97
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:20174049-20173893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:22133120-22132964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr28:32014997-32014838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
114, 84
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr28:12662178-12662344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr28:26943940-26944105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr28:17737938-17738106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr28:11398582-11398751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr28:11827900-11827731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr28:25805936-25806105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-396
               

               
Cow position:
               
chr28:2077713-2077530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 84
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr28:2892468-2892275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr28:5805874-5805694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr28:25827516-25827708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr28:27218537-27218346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 156
               

               
Conread position:
               
214-336
               

               
Cow position:
               
chr28:6124049-6124171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 70
               

               
Conread position:
               
214-336
               

               
Cow position:
               
chr28:18188044-18187924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
214-370
               

               
Cow position:
               
chr28:6563683-6563840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
214-379
               

               
Cow position:
               
chr28:9426140-9426302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr28:5609707-5609871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr28:10053122-10053279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr28:11562032-11562200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr28:28765693-28765857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr28:3725996-3726164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr28:17620147-17620337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr28:12974095-12973900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
215-371
               

               
Cow position:
               
chr28:9705866-9705706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr28:2777741-2777584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr28:3494571-3494409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr28:8936358-8936204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr28:4013293-4013107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr28:4937030-4937186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr28:3011058-3011217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr28:5204393-5204249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr28:13195541-13195697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr28:7350858-7350677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr28:10196661-10196842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr28:23616614-23616426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr28:2825630-2825430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
217-360
               

               
Cow position:
               
chr28:23460352-23460209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
217-375
               

               
Cow position:
               
chr28:3257200-3257040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
218-347
               

               
Cow position:
               
chr28:16964756-16964887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr28:9285170-9285321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr28:7413870-7413713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr28:16419732-16419579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
218-376
               

               
Cow position:
               
chr28:32284033-32284189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr28:31223349-31223511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr28:7504088-7503926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 91
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr28:8655956-8656120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr28:19262377-19262541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr28:30902328-30902172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr28:5236388-5236581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
218-407
               

               
Cow position:
               
chr28:34230438-34230247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
218-408
               

               
Cow position:
               
chr28:22085338-22085524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 85
               

               
Conread position:
               
218-417
               

               
Cow position:
               
chr28:3023709-3023906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
219-373
               

               
Cow position:
               
chr28:21263360-21263211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
219-403
               

               
Cow position:
               
chr28:32358310-32358130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
220-338
               

               
Cow position:
               
chr28:5074316-5074436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
220-370
               

               
Cow position:
               
chr28:18847766-18847614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr28:13174349-13174500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:3423982-3423831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:4588519-4588372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:5441692-5441844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:7008776-7008924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:8259837-8259682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:11422614-11422762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr28:14710544-14710392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr28:11346284-11346441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
103, 83
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr28:17680830-17680668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
220-382
               

               
Cow position:
               
chr28:24064687-24064853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
220-385
               

               
Cow position:
               
chr28:11006931-11006767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr28:5236079-5235904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr28:29416520-29416693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr28:7131887-7132032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr28:3492583-3492730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr28:4159168-4159009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr28:21868661-21868511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr28:24238280-24238423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr28:30921853-30922006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr28:10763092-10762947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
221-377
               

               
Cow position:
               
chr28:29988904-29989060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
221-381
               

               
Cow position:
               
chr28:2819969-2819821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
221-385
               

               
Cow position:
               
chr28:32593430-32593596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
221-401
               

               
Cow position:
               
chr28:2151236-2151415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr28:33884607-33884425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
221-417
               

               
Cow position:
               
chr28:4016727-4016538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
222-377
               

               
Cow position:
               
chr28:4074180-4074019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
222-379
               

               
Cow position:
               
chr28:16856903-16857059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr28:30385358-30385198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
222-403
               

               
Cow position:
               
chr28:3746400-3746225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
222-403
               

               
Cow position:
               
chr28:4186106-4185929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
223-371
               

               
Cow position:
               
chr28:7523213-7523360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
223-373
               

               
Cow position:
               
chr28:4866376-4866519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr28:8716178-8716342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
223-402
               

               
Cow position:
               
chr28:12430808-12430630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
224-371
               

               
Cow position:
               
chr28:12951617-12951473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr28:6975435-6975264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr28:4227676-4227528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr28:7014654-7014507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr28:13474499-13474354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
225-403
               

               
Cow position:
               
chr28:20968376-20968557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
225-403
               

               
Cow position:
               
chr28:24082470-24082293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
226-369
               

               
Cow position:
               
chr28:22182934-22183083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
227-371
               

               
Cow position:
               
chr28:23579100-23578955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
227-401
               

               
Cow position:
               
chr28:27721894-27721723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
230-414
               

               
Cow position:
               
chr28:19118167-19117982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 85
               

               
Conread position:
               
232-373
               

               
Cow position:
               
chr28:12933543-12933676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
232-377
               

               
Cow position:
               
chr28:4046037-4045894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
233-359
               

               
Cow position:
               
chr28:8141850-8141722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
233-377
               

               
Cow position:
               
chr28:16879760-16879623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
233-381
               

               
Cow position:
               
chr28:21363932-21363786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
233-381
               

               
Cow position:
               
chr28:26269591-26269432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
233-385
               

               
Cow position:
               
chr28:13160351-13160505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
233-396
               

               
Cow position:
               
chr28:18608173-18608338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
233-403
               

               
Cow position:
               
chr28:17071532-17071360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-380
               

               
Cow position:
               
chr28:26743822-26743673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
235-381
               

               
Cow position:
               
chr28:20397176-20397324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
236-373
               

               
Cow position:
               
chr28:18369824-18369962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
246-373
               

               
Cow position:
               
chr28:4138488-4138617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
251-381
               

               
Cow position:
               
chr28:2899172-2899035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.