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Cow genome map

           
Conread name:
           
Pig2-127N17
        

               
Conread position:
               
137-351
               

               
Cow position:
               
chr4:12604921-12604711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
145-381
               

               
Cow position:
               
chr4:61451485-61451247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr4:48227449-48227677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr4:21112334-21112545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
173-385
               

               
Cow position:
               
chr4:54390778-54390989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
173-401
               

               
Cow position:
               
chr4:5629298-5629526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr4:44927307-44927497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
177-373
               

               
Cow position:
               
chr4:31178056-31177866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
181-404
               

               
Cow position:
               
chr4:62794130-62794354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
183-359
               

               
Cow position:
               
chr4:52576587-52576413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
184-373
               

               
Cow position:
               
chr4:68777166-68776977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
187-381
               

               
Cow position:
               
chr4:30691229-30691037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
188-373
               

               
Cow position:
               
chr4:23943417-23943603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
188-381
               

               
Cow position:
               
chr4:1645856-1646058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
189-403
               

               
Cow position:
               
chr4:29317845-29318065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
190-371
               

               
Cow position:
               
chr4:47731086-47730902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
190-381
               

               
Cow position:
               
chr4:58248632-58248435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr4:15871520-15871722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr4:20147403-20147194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
194-371
               

               
Cow position:
               
chr4:47748636-47748455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
196-370
               

               
Cow position:
               
chr4:63198147-63198327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
196-381
               

               
Cow position:
               
chr4:32562050-32561863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
196-403
               

               
Cow position:
               
chr4:50494995-50494782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
198-373
               

               
Cow position:
               
chr4:45837414-45837586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
198-373
               

               
Cow position:
               
chr4:54315007-54315184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
199-412
               

               
Cow position:
               
chr4:36709240-36709022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
200-342
               

               
Cow position:
               
chr4:48042266-48042404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
201-371
               

               
Cow position:
               
chr4:22215302-22215467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
202-371
               

               
Cow position:
               
chr4:37732270-37732439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr4:3341163-3340994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr4:19496714-19496536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr4:49808729-49808559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
202-377
               

               
Cow position:
               
chr4:46566259-46566432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr4:13919190-13919012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr4:45874252-45874455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
203-300
               

               
Cow position:
               
chr4:5637594-5637497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-381
               

               
Cow position:
               
chr4:66547554-66547734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
203-403
               

               
Cow position:
               
chr4:19238427-19238230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
204-321
               

               
Cow position:
               
chr4:47451686-47451569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-329
               

               
Cow position:
               
chr4:21174093-21173971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
204-340
               

               
Cow position:
               
chr4:22701604-22701735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
204-345
               

               
Cow position:
               
chr4:43709948-43710088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
204-350
               

               
Cow position:
               
chr4:19328793-19328649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
204-356
               

               
Cow position:
               
chr4:61214649-61214792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
204-360
               

               
Cow position:
               
chr4:20471088-20470932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
204-366
               

               
Cow position:
               
chr4:68456708-68456872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr4:15439794-15439614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr4:28660336-28660513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
204-378
               

               
Cow position:
               
chr4:59557647-59557477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
204-379
               

               
Cow position:
               
chr4:47125630-47125806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr4:32693996-32693822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr4:66256887-66256720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
204-385
               

               
Cow position:
               
chr4:1015278-1015099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr4:19431482-19431685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr4:61887849-61887647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr4:7043610-7043778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 111
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr4:17851053-17851211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr4:19745076-19744917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
205-384
               

               
Cow position:
               
chr4:6072842-6073024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
205-384
               

               
Cow position:
               
chr4:26183343-26183160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
205-386
               

               
Cow position:
               
chr4:48486204-48486022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
205-387
               

               
Cow position:
               
chr4:28836739-28836563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr4:56756064-56755888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr4:23326937-23327140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
207-338
               

               
Cow position:
               
chr4:8359308-8359434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
207-350
               

               
Cow position:
               
chr4:42672424-42672571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr4:11897095-11897259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr4:65463307-65463467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
207-374
               

               
Cow position:
               
chr4:21161313-21161146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr4:38358623-38358791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr4:46656337-46656163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
208-355
               

               
Cow position:
               
chr4:69286580-69286729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
208-369
               

               
Cow position:
               
chr4:7816505-7816338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr4:22164280-22164120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr4:34641519-34641682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr4:42608943-42608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr4:53941588-53941753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr4:13668414-13668580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr4:14153319-14153149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr4:38209771-38209933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr4:59785522-59785364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr4:57566490-57566651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr4:2713653-2713824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr4:16118524-16118694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr4:4320790-4320956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr4:10999504-10999680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr4:56236350-56236518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr4:16238965-16239140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr4:8182431-8182620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
208-402
               

               
Cow position:
               
chr4:35291227-35291032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr4:16513324-16513513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr4:22546637-22546830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr4:23799548-23799755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
208-417
               

               
Cow position:
               
chr4:65919822-65919606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
209-314
               

               
Cow position:
               
chr4:64336074-64336180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
209-333
               

               
Cow position:
               
chr4:45660806-45660931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
209-341
               

               
Cow position:
               
chr4:45387023-45386895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr4:85896-85740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr4:30172024-30172184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr4:31505815-31505980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr4:52823200-52823358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr4:60821907-60821742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:7964444-7964606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:10558739-10558578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:18952185-18952015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:21088665-21088825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 138
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:35982204-35982041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:45484006-45483840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:46669187-46669018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:62820850-62821014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr4:65291660-65291814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
209-376
               

               
Cow position:
               
chr4:9444479-9444648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr4:3519621-3519459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr4:3879321-3879152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr4:56410548-56410383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
209-379
               

               
Cow position:
               
chr4:50194897-50194726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr4:27657175-27657010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:2681532-2681363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:4084905-4085077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:5790849-5790676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:8352357-8352531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:16636873-16637041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:19539028-19539203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:38822115-38822283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr4:43909968-43909795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr4:30944160-30943987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr4:53050198-53050021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 143
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr4:348229-348412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr4:19119225-19119029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr4:22138013-22138211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr4:44772834-44773032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr4:47038972-47038778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr4:62472279-62472087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
209-405
               

               
Cow position:
               
chr4:45706250-45706050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr4:47230793-47230991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr4:47283808-47284006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
210-336
               

               
Cow position:
               
chr4:69360812-69360684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
210-349
               

               
Cow position:
               
chr4:45741883-45742023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
210-357
               

               
Cow position:
               
chr4:46286751-46286896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
210-363
               

               
Cow position:
               
chr4:12474053-12473898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
210-363
               

               
Cow position:
               
chr4:13284586-13284431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr4:14131626-14131471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr4:26335165-26335319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr4:58018544-58018389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
210-371
               

               
Cow position:
               
chr4:63293660-63293503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr4:10915628-10915793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr4:386192-386353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr4:2770274-2770115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr4:37991794-37991631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr4:60527383-60527222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
210-374
               

               
Cow position:
               
chr4:20282441-20282283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
210-380
               

               
Cow position:
               
chr4:23808162-23807984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr4:19200308-19200146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr4:19573491-19573318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr4:19584917-19584737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr4:22101058-22101231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr4:38946421-38946249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
210-383
               

               
Cow position:
               
chr4:45723450-45723277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr4:11187657-11187462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr4:16091115-16091305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
165, 119
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr4:23846852-23847040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
168, 76
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr4:39007699-39007518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr4:42347689-42347495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr4:18098859-18099066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 97
               

               
Conread position:
               
211-343
               

               
Cow position:
               
chr4:6202202-6202332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
211-350
               

               
Cow position:
               
chr4:3688131-3687993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
211-350
               

               
Cow position:
               
chr4:49338240-49338106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr4:10958457-10958617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr4:38156891-38157044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr4:63078428-63078266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:537568-537724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:6093862-6094024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:10785939-10786098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
119, 94
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:36876655-36876816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:41900167-41900011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:42373954-42374114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 96
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:42423607-42423763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:48104364-48104527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr4:56308003-56307844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
211-376
               

               
Cow position:
               
chr4:14994375-14994206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr4:41099135-41098973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:13326751-13326921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:17790095-17790258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:23271484-23271316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:37691108-37691278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:50687664-50687827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr4:61524631-61524466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr4:65548831-65549006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
211-387
               

               
Cow position:
               
chr4:4647602-4647426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr4:5250392-5250198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr4:31594558-31594752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 151
               

               
Conread position:
               
212-347
               

               
Cow position:
               
chr4:43436467-43436330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
212-365
               

               
Cow position:
               
chr4:43894610-43894768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
212-371
               

               
Cow position:
               
chr4:3299596-3299747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:561834-561673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:19496778-19496944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:19700307-19700137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:20153354-20153507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:22073117-22073282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:45726704-45726866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr4:68590969-68590813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
212-380
               

               
Cow position:
               
chr4:59105485-59105648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr4:1985851-1985681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr4:25802894-25802701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr4:28841619-28841427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr4:51851413-51851217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr4:56239664-56239849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr4:16221671-16221882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
213-347
               

               
Cow position:
               
chr4:45629845-45629979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
213-362
               

               
Cow position:
               
chr4:34722570-34722420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
213-363
               

               
Cow position:
               
chr4:29116572-29116727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
213-369
               

               
Cow position:
               
chr4:42080504-42080656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr4:53347782-53347931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr4:45212987-45213145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr4:46136948-46136792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr4:51728272-51728121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr4:12908568-12908411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
213-379
               

               
Cow position:
               
chr4:19199084-19199251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr4:59015780-59015623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr4:7698464-7698300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 93
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr4:27521759-27521586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr4:60131428-60131259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr4:61608769-61608931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
213-385
               

               
Cow position:
               
chr4:12245412-12245241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
213-393
               

               
Cow position:
               
chr4:45773665-45773484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
213-396
               

               
Cow position:
               
chr4:23190470-23190655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
213-396
               

               
Cow position:
               
chr4:32458657-32458842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr4:2680488-2680297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr4:29107110-29106918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr4:47305280-47305088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
214-361
               

               
Cow position:
               
chr4:60761839-60761691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
214-373
               

               
Cow position:
               
chr4:19333580-19333428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr4:45801717-45801548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
214-386
               

               
Cow position:
               
chr4:27632639-27632471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr4:26671644-26671822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr4:46435532-46435336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
215-370
               

               
Cow position:
               
chr4:24371657-24371815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr4:19504119-19503970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr4:31136952-31136797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr4:40995931-40995772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr4:56395713-56395554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr4:58045435-58045594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-374
               

               
Cow position:
               
chr4:30769229-30769076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
215-380
               

               
Cow position:
               
chr4:47262734-47262569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 96
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr4:45685650-45685491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr4:67393292-67393125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
215-405
               

               
Cow position:
               
chr4:13693476-13693665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
216-306
               

               
Cow position:
               
chr4:31761695-31761605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-360
               

               
Cow position:
               
chr4:22137924-22138066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
216-369
               

               
Cow position:
               
chr4:48322233-48322082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr4:8675563-8675412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 81
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr4:68076343-68076495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr4:39569395-39569245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr4:46176099-46176257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr4:47048310-47048159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr4:63261669-63261512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr4:65108727-65108573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chr4:35974563-35974391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr4:17076081-17076250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr4:34383140-34383330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr4:38944062-38944248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 77
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr4:35578737-35578933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr4:48031529-48031724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 142
               

               
Conread position:
               
217-371
               

               
Cow position:
               
chr4:15905301-15905146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
217-373
               

               
Cow position:
               
chr4:23600364-23600209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
217-373
               

               
Cow position:
               
chr4:33389057-33388898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
217-373
               

               
Cow position:
               
chr4:63951969-63952126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr4:12004411-12004248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr4:46883472-46883637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
217-385
               

               
Cow position:
               
chr4:59074543-59074713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
217-387
               

               
Cow position:
               
chr4:56591237-56591065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
217-402
               

               
Cow position:
               
chr4:22071477-22071660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr4:20026910-20027092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
217-403
               

               
Cow position:
               
chr4:49158597-49158783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
218-362
               

               
Cow position:
               
chr4:13372195-13372051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr4:19578577-19578431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
113, 33
               

               
Conread position:
               
218-371
               

               
Cow position:
               
chr4:66168144-66168288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
218-372
               

               
Cow position:
               
chr4:30935165-30935321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr4:25197297-25197453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr4:45964085-45963925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:22713303-22713458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:26959772-26959935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:29247005-29247167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:34310271-34310424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:46234968-46235126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr4:50837898-50837735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
218-401
               

               
Cow position:
               
chr4:61388874-61389055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr4:12127445-12127628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 82
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr4:45250167-45249981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr4:45800074-45799883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr4:51083146-51083327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr4:617183-617373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
219-368
               

               
Cow position:
               
chr4:68569451-68569601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
219-371
               

               
Cow position:
               
chr4:20124775-20124922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
219-381
               

               
Cow position:
               
chr4:19420562-19420723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
219-403
               

               
Cow position:
               
chr4:3853672-3853486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
219-410
               

               
Cow position:
               
chr4:12031042-12030850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
220-354
               

               
Cow position:
               
chr4:9571298-9571165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
220-360
               

               
Cow position:
               
chr4:34919082-34919219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
220-368
               

               
Cow position:
               
chr4:51026543-51026397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
220-370
               

               
Cow position:
               
chr4:2774915-2774764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr4:65173294-65173146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:19543135-19542978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:21874370-21874217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:23450898-23451052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:28854084-28854233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:48152179-48152333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
220-373
               

               
Cow position:
               
chr4:51617804-51617957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr4:48239156-48239318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr4:54937286-54937115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
220-385
               

               
Cow position:
               
chr4:45076887-45077048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
220-385
               

               
Cow position:
               
chr4:45588239-45588402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
220-397
               

               
Cow position:
               
chr4:26659492-26659316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr4:39010245-39010062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr4:13131673-13131485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr4:27699232-27699042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr4:46061140-46060949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
221-349
               

               
Cow position:
               
chr4:21232491-21232626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr4:19463739-19463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr4:17051093-17051244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr4:59001947-59002098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 84
               

               
Conread position:
               
221-382
               

               
Cow position:
               
chr4:501479-501650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr4:23059661-23059844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr4:33181735-33181555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr4:69290550-69290732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr4:53830671-53830483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
222-329
               

               
Cow position:
               
chr4:33273155-33273263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
222-369
               

               
Cow position:
               
chr4:51986384-51986533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr4:2099822-2099674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
222-371
               

               
Cow position:
               
chr4:33838613-33838759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
222-373
               

               
Cow position:
               
chr4:62317637-62317487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr4:61286727-61286578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
222-417
               

               
Cow position:
               
chr4:44854097-44854296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
223-372
               

               
Cow position:
               
chr4:23984929-23985082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
223-373
               

               
Cow position:
               
chr4:37915149-37915294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr4:19709132-19708973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr4:23444849-23445012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
223-402
               

               
Cow position:
               
chr4:17186159-17186338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
223-403
               

               
Cow position:
               
chr4:25354717-25354536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
223-417
               

               
Cow position:
               
chr4:41907393-41907587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
225-365
               

               
Cow position:
               
chr4:46527191-46527052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
225-372
               

               
Cow position:
               
chr4:50131709-50131559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr4:22331307-22331166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr4:46494488-46494345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
225-376
               

               
Cow position:
               
chr4:62370496-62370355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
225-377
               

               
Cow position:
               
chr4:38940755-38940905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr4:13221993-13222153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr4:19102689-19102848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr4:27276358-27276510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
225-382
               

               
Cow position:
               
chr4:14020686-14020529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 98
               

               
Conread position:
               
225-385
               

               
Cow position:
               
chr4:54871836-54871998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
225-403
               

               
Cow position:
               
chr4:3421811-3421633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
225-409
               

               
Cow position:
               
chr4:34722697-34722882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
226-380
               

               
Cow position:
               
chr4:27691484-27691638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
101, 126
               

               
Conread position:
               
226-403
               

               
Cow position:
               
chr4:40414441-40414617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
227-385
               

               
Cow position:
               
chr4:54789828-54789668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
227-387
               

               
Cow position:
               
chr4:48138130-48137971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
227-408
               

               
Cow position:
               
chr4:48381575-48381383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
229-381
               

               
Cow position:
               
chr4:36070885-36070736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
229-403
               

               
Cow position:
               
chr4:43740714-43740545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
232-402
               

               
Cow position:
               
chr4:34653695-34653857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 72
               

               
Conread position:
               
233-373
               

               
Cow position:
               
chr4:54478735-54478880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
233-380
               

               
Cow position:
               
chr4:45775151-45775303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
233-381
               

               
Cow position:
               
chr4:30845564-30845405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
233-386
               

               
Cow position:
               
chr4:21531461-21531615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
233-403
               

               
Cow position:
               
chr4:27511727-27511555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
234-373
               

               
Cow position:
               
chr4:60506454-60506314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
234-393
               

               
Cow position:
               
chr4:65885680-65885524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
238-381
               

               
Cow position:
               
chr4:68807931-68808075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
246-373
               

               
Cow position:
               
chr4:53380857-53380729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
259-371
               

               
Cow position:
               
chr4:22050959-22051072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               
Show alignments to all cow chromosomes.