Cow genome map

Conread name: Pig2-130F05

Conread position: 13-368
Cow position: chr17:15708672-15709054 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 173

Conread position: 13-369
Cow position: chr17:14212699-14213078 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 171

Conread position: 13-385
Cow position: chr17:27791471-27791852 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 17

Conread position: 14-386
Cow position: chr17:18591734-18591344 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 173

Conread position: 24-302
Cow position: chr17:32407377-32407669 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 15

Conread position: 24-369
Cow position: chr17:23321113-23321478 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 25-286
Cow position: chr17:8994034-8994307 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 15

Conread position: 25-360
Cow position: chr17:20225908-20225549 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 15

Conread position: 25-368
Cow position: chr17:6612328-6611961 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr17:20391080-20390713 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr17:15809293-15808925 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 25

Conread position: 25-369
Cow position: chr17:17957903-17957542 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr17:18777526-18777892 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 22

Conread position: 25-385
Cow position: chr17:26829438-26829822 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:1970457-1970072 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:4063644-4063261 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr17:4480576-4480961 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 12

Conread position: 25-386
Cow position: chr17:5638582-5638968 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:5672210-5672596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:6123089-6122704 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:15118123-15117738 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr17:15439097-15438714 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 14

Conread position: 25-386
Cow position: chr17:21770986-21770601 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:24785496-24785111 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr17:29824654-29825040 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr17:37528666-37529051 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 269
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 52, 15

Conread position: 25-387
Cow position: chr17:148212-147842 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 24

Conread position: 26-381
Cow position: chr17:15307112-15307464 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 14

Conread position: 28-275
Cow position: chr17:38992055-38991793 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 12

Conread position: 49-189
Cow position: chr17:40802031-40801883 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 49-242
Cow position: chr17:2201580-2201374 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 152

Conread position: 49-246
Cow position: chr17:41893108-41893315 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 162

Conread position: 49-252
Cow position: chr17:11913466-11913681 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 49-271
Cow position: chr17:3780933-3780699 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 49-271
Cow position: chr17:8449994-8449758 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 111

Conread position: 49-289
Cow position: chr17:14871966-14871709 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 135

Conread position: 49-293
Cow position: chr17:29897922-29897665 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 151

Conread position: 49-316
Cow position: chr17:18242263-18241997 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 39

Conread position: 49-317
Cow position: chr17:6081772-6081501 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 100

Conread position: 49-358
Cow position: chr17:16903862-16903534 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 135

Conread position: 49-362
Cow position: chr17:2177262-2176925 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 64, 134

Conread position: 49-362
Cow position: chr17:20091340-20091660 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 25

Conread position: 49-362
Cow position: chr17:20093877-20094213 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 53

Conread position: 49-362
Cow position: chr17:37415609-37415943 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 24

Conread position: 49-368
Cow position: chr17:5806206-5806550 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 135

Conread position: 49-368
Cow position: chr17:13910334-13910672 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 113

Conread position: 49-368
Cow position: chr17:14029063-14029406 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 145

Conread position: 49-368
Cow position: chr17:15854018-15853673 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 152

Conread position: 49-368
Cow position: chr17:20084528-20084872 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 214

Conread position: 49-368
Cow position: chr17:30182298-30182641 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 49-369
Cow position: chr17:144924-145255 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 20

Conread position: 49-369
Cow position: chr17:731215-731552 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 119

Conread position: 49-369
Cow position: chr17:3237694-3237366 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 220

Conread position: 49-369
Cow position: chr17:4085350-4085006 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 26, 152

Conread position: 49-369
Cow position: chr17:29156656-29156319 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 49-370
Cow position: chr17:44482130-44481793 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 49-371
Cow position: chr17:1568937-1569278 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 134

Conread position: 49-371
Cow position: chr17:31232953-31232615 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 129

Conread position: 49-384
Cow position: chr17:15351321-15350970 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 21

Conread position: 49-385
Cow position: chr17:184430-184069 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr17:1311480-1311841 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 99

Conread position: 49-386
Cow position: chr17:1654480-1654842 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 26, 146

Conread position: 49-386
Cow position: chr17:2244789-2245137 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 129

Conread position: 49-386
Cow position: chr17:2265471-2265116 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 151

Conread position: 49-386
Cow position: chr17:10270076-10270428 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 146

Conread position: 49-386
Cow position: chr17:15140056-15140417 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr17:18099791-18100153 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 136

Conread position: 49-386
Cow position: chr17:21767177-21766818 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 125

Conread position: 49-386
Cow position: chr17:22248969-22249330 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 158

Conread position: 49-387
Cow position: chr17:27978386-27978031 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 41

Conread position: 49-392
Cow position: chr17:17128287-17127922 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 134

Conread position: 50-240
Cow position: chr17:29083450-29083256 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 50-249
Cow position: chr17:29041621-29041828 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 37

Conread position: 50-252
Cow position: chr17:18324132-18324333 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 51

Conread position: 50-316
Cow position: chr17:1672580-1672299 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 150

Conread position: 50-319
Cow position: chr17:6955921-6955644 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 27, 161

Conread position: 50-362
Cow position: chr17:33792353-33792040 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 38

Conread position: 50-369
Cow position: chr17:16118183-16118515 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 25, 148

Conread position: 50-369
Cow position: chr17:18201003-18200676 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 89

Conread position: 50-369
Cow position: chr17:34235969-34236313 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 134

Conread position: 50-371
Cow position: chr17:23337770-23338113 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 50-373
Cow position: chr17:21304571-21304226 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 150

Conread position: 50-386
Cow position: chr17:4211211-4210850 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 144

Conread position: 51-226
Cow position: chr17:15335157-15335345 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 150

Conread position: 55-316
Cow position: chr17:11337892-11338150 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 149

Conread position: 58-369
Cow position: chr17:36790340-36790009 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 138

Conread position: 58-386
Cow position: chr17:2839296-2838954 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 136

Conread position: 59-350
Cow position: chr17:14232431-14232747 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 125

Conread position: 61-376
Cow position: chr17:29212903-29212565 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 76-315
Cow position: chr17:29471692-29471439 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 124

Conread position: 109-386
Cow position: chr17:453057-452773 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 63

Conread position: 109-386
Cow position: chr17:14932656-14932946 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 63

Conread position: 109-387
Cow position: chr17:3305787-3305495 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 111-367
Cow position: chr17:14865175-14865444 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 61

Conread position: 122-460
Cow position: chr17:5546086-5546428 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 50

Show alignments to all cow chromosomes.