Cow genome map

Conread name: Pig2-130F05

Conread position: 6-311
Cow position: chr18:12241389-12241077 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 281

Conread position: 13-290
Cow position: chr18:31139293-31139000 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 27

Conread position: 13-368
Cow position: chr18:13270454-13270072 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 173

Conread position: 13-386
Cow position: chr18:29071961-29071566 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 64, 17

Conread position: 14-384
Cow position: chr18:35293654-35293265 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 11

Conread position: 25-184
Cow position: chr18:35013121-35013290 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 21

Conread position: 25-274
Cow position: chr18:30844377-30844635 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 24

Conread position: 25-307
Cow position: chr18:51690326-51690028 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 52, 15

Conread position: 25-314
Cow position: chr18:29079266-29078961 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 24

Conread position: 25-316
Cow position: chr18:3190273-3189986 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 25

Conread position: 25-321
Cow position: chr18:16857314-16857006 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 15

Conread position: 25-367
Cow position: chr18:40484528-40484164 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 24

Conread position: 25-368
Cow position: chr18:26242930-26243296 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr18:30607225-30606858 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr18:51602136-51602503 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr18:10292260-10291892 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr18:24037317-24037685 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 25-369
Cow position: chr18:32164402-32164770 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr18:35443848-35444207 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr18:11870016-11869631 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr18:24619952-24619573 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr18:28928077-28928445 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 23

Conread position: 25-386
Cow position: chr18:37733218-37732834 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 50, 15

Conread position: 25-386
Cow position: chr18:40195641-40195257 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 24

Conread position: 25-386
Cow position: chr18:47745282-47744897 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr18:50092915-50093300 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 25-386
Cow position: chr18:51459316-51459697 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr18:51663703-51663320 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr18:51698169-51697790 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr18:54047408-54047015 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 15

Conread position: 25-389
Cow position: chr18:602935-603323 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 28-366
Cow position: chr18:43430529-43430171 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 21

Conread position: 48-317
Cow position: chr18:43060095-43060362 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 110

Conread position: 48-372
Cow position: chr18:15688509-15688191 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 77

Conread position: 49-187
Cow position: chr18:29059315-29059464 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 126

Conread position: 49-208
Cow position: chr18:20151113-20150942 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 152

Conread position: 49-287
Cow position: chr18:33851035-33850781 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 111

Conread position: 49-289
Cow position: chr18:29946956-29946706 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 76

Conread position: 49-312
Cow position: chr18:12269659-12269381 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 49-316
Cow position: chr18:10221178-10221462 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 142

Conread position: 49-316
Cow position: chr18:43464266-43464551 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 148

Conread position: 49-366
Cow position: chr18:15172353-15172020 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 143

Conread position: 49-368
Cow position: chr18:25923876-25923548 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 17

Conread position: 49-369
Cow position: chr18:6103898-6104242 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 49-369
Cow position: chr18:17323881-17323548 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 147

Conread position: 49-369
Cow position: chr18:17944019-17943696 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 143

Conread position: 49-369
Cow position: chr18:36648900-36648564 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 33

Conread position: 49-369
Cow position: chr18:36776782-36776437 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 135

Conread position: 49-370
Cow position: chr18:28929932-28930253 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 105

Conread position: 49-386
Cow position: chr18:2853282-2853646 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 49-386
Cow position: chr18:17335235-17335591 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 153

Conread position: 49-386
Cow position: chr18:18215507-18215872 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr18:19356019-19355659 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr18:29797579-29797942 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 152

Conread position: 49-386
Cow position: chr18:52629752-52630113 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 158

Conread position: 50-298
Cow position: chr18:21797598-21797332 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 169

Conread position: 50-309
Cow position: chr18:56483161-56483435 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 131

Conread position: 50-314
Cow position: chr18:43473102-43472822 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 62

Conread position: 50-316
Cow position: chr18:53872397-53872115 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 180

Conread position: 50-362
Cow position: chr18:41238036-41237707 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 167

Conread position: 50-386
Cow position: chr18:23659390-23659751 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 104

Conread position: 50-386
Cow position: chr18:23688677-23688316 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 27, 134

Conread position: 50-386
Cow position: chr18:35057530-35057168 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 146

Conread position: 51-300
Cow position: chr18:42080520-42080778 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 24, 140

Conread position: 51-368
Cow position: chr18:17670467-17670796 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 141

Conread position: 52-369
Cow position: chr18:33272137-33271799 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 146

Conread position: 55-376
Cow position: chr18:5570023-5569698 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 20

Conread position: 55-386
Cow position: chr18:16390722-16391067 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 19

Conread position: 58-369
Cow position: chr18:15485705-15486020 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 128

Conread position: 61-368
Cow position: chr18:37582964-37583295 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 90

Conread position: 84-369
Cow position: chr18:32859564-32859861 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 99

Conread position: 109-301
Cow position: chr18:14965719-14965522 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 0

Conread position: 109-382
Cow position: chr18:13508635-13508908 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 33

Conread position: 109-385
Cow position: chr18:27539866-27539577 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 70

Conread position: 109-386
Cow position: chr18:22790986-22791268 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 173

Conread position: 109-386
Cow position: chr18:29767865-29767579 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 250

Conread position: 109-386
Cow position: chr18:32436667-32436957 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 127

Conread position: 110-368
Cow position: chr18:50834952-50835225 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 62

Conread position: 124-387
Cow position: chr18:6881830-6882112 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.