Cow genome map
| Conread name: | Pig2-130F05 |
| Conread position: | 5-369 |
| Cow position: | chr19:17883518-17883133 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 89 |
| Conread position: | 6-386 |
| Cow position: | chr19:37844233-37844629 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 13-259 |
| Cow position: | chr19:9543135-9543370 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 13-368 |
| Cow position: | chr19:19389384-19389002 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr19:28596922-28596544 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 13-368 |
| Cow position: | chr19:30037357-30037739 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr19:33528397-33528015 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 190 |
| Conread position: | 13-386 |
| Cow position: | chr19:29393892-29393492 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 24-318 |
| Cow position: | chr19:35843389-35843082 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 25-287 |
| Cow position: | chr19:29367063-29366785 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-287 |
| Cow position: | chr19:29624571-29624293 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-298 |
| Cow position: | chr19:3086327-3086039 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 25-311 |
| Cow position: | chr19:10195948-10195646 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-316 |
| Cow position: | chr19:12652410-12652098 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 25-363 |
| Cow position: | chr19:930354-929994 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-368 |
| Cow position: | chr19:9118345-9117978 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr19:30515507-30515859 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr19:33119189-33119556 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr19:41204692-41205059 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr19:48626594-48626227 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr19:27081880-27082241 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr19:43149116-43148748 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 25-384 |
| Cow position: | chr19:405683-405299 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-385 |
| Cow position: | chr19:41868-41485 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr19:5902562-5902177 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr19:16316684-16317058 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr19:22512779-22512395 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-386 |
| Cow position: | chr19:55164122-55164507 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 34-386 |
| Cow position: | chr19:20403809-20403433 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 5 |
| Conread position: | 37-328 |
| Cow position: | chr19:7065203-7064900 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 42-243 |
| Cow position: | chr19:3221631-3221418 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 152 |
| Conread position: | 42-386 |
| Cow position: | chr19:7472566-7472212 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 48-362 |
| Cow position: | chr19:37653675-37653349 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 48-368 |
| Cow position: | chr19:40248290-40247945 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 48-386 |
| Cow position: | chr19:32140510-32140150 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 48-386 |
| Cow position: | chr19:35982282-35981921 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 49-309 |
| Cow position: | chr19:23488271-23487996 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-312 |
| Cow position: | chr19:44839675-44839938 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 49-316 |
| Cow position: | chr19:12209418-12209706 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 128 |
| Conread position: | 49-316 |
| Cow position: | chr19:50561575-50561294 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 64, 151 |
| Conread position: | 49-317 |
| Cow position: | chr19:30937708-30938003 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 49-351 |
| Cow position: | chr19:444426-444748 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 49-365 |
| Cow position: | chr19:55421552-55421218 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 49-369 |
| Cow position: | chr19:19173171-19172828 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 49-369 |
| Cow position: | chr19:30473633-30473980 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 49-369 |
| Cow position: | chr19:42580813-42581142 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 49-370 |
| Cow position: | chr19:25085704-25085382 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 49-385 |
| Cow position: | chr19:14156595-14156951 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 156 |
| Conread position: | 49-385 |
| Cow position: | chr19:34985599-34985253 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 49-385 |
| Cow position: | chr19:35381567-35381920 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 49-386 |
| Cow position: | chr19:777024-776664 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 49-386 |
| Cow position: | chr19:1293862-1293501 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 49-386 |
| Cow position: | chr19:9704680-9705043 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 49-386 |
| Cow position: | chr19:20611846-20611484 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-388 |
| Cow position: | chr19:20672083-20672435 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 219 |
| Conread position: | 50-303 |
| Cow position: | chr19:1581398-1581668 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 50-319 |
| Cow position: | chr19:39943395-39943672 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 50-337 |
| Cow position: | chr19:46821362-46821055 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 50-369 |
| Cow position: | chr19:4447726-4447381 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 50-369 |
| Cow position: | chr19:4599521-4599184 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 245 |
| Conread position: | 50-369 |
| Cow position: | chr19:31782081-31781738 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 50-386 |
| Cow position: | chr19:8206504-8206847 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 50-386 |
| Cow position: | chr19:10613739-10613378 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 50-386 |
| Cow position: | chr19:36189209-36188867 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 50-388 |
| Cow position: | chr19:39339559-39339918 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 51-368 |
| Cow position: | chr19:55378403-55378063 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 133 |
| Conread position: | 51-369 |
| Cow position: | chr19:2260937-2261270 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 179 |
| Conread position: | 52-288 |
| Cow position: | chr19:46873516-46873769 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 52-308 |
| Cow position: | chr19:1663576-1663307 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 53-311 |
| Cow position: | chr19:33648816-33649083 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 210 |
| Conread position: | 55-369 |
| Cow position: | chr19:42866971-42866641 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 214 |
| Conread position: | 58-316 |
| Cow position: | chr19:22391720-22391445 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 61-354 |
| Cow position: | chr19:5026692-5027010 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 65-301 |
| Cow position: | chr19:267600-267349 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 76-296 |
| Cow position: | chr19:6581-6355 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 109-252 |
| Cow position: | chr19:27613063-27613206 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-368 |
| Cow position: | chr19:344818-344554 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 109-368 |
| Cow position: | chr19:33573280-33573549 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 111-362 |
| Cow position: | chr19:29364800-29364560 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 123-368 |
| Cow position: | chr19:1564370-1564628 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 123-384 |
| Cow position: | chr19:730568-730839 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 126-386 |
| Cow position: | chr19:16478444-16478716 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 163 |
| Conread position: | 128-388 |
| Cow position: | chr19:35621949-35621676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 61 |
Show alignments to all cow chromosomes.