Cow genome map

Conread name: Pig2-130F05

Conread position: 2-386
Cow position: chr20:34231346-34231743 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 34, 184

Conread position: 6-350
Cow position: chr20:9589292-9588925 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 69, 6

Conread position: 7-386
Cow position: chr20:26052836-26053240 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 13-368
Cow position: chr20:22048879-22048497 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 173

Conread position: 14-388
Cow position: chr20:10405202-10404808 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 11

Conread position: 16-368
Cow position: chr20:13955129-13954761 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 8

Conread position: 24-386
Cow position: chr20:30777205-30776828 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 15

Conread position: 25-250
Cow position: chr20:14327118-14327352 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 24

Conread position: 25-316
Cow position: chr20:11331176-11331483 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr20:5503249-5503616 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr20:9223350-9222983 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr20:13303800-13304167 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr20:16559034-16559401 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr20:30479607-30479240 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 15

Conread position: 25-368
Cow position: chr20:38000976-38000621 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 15

Conread position: 25-369
Cow position: chr20:753939-753570 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr20:22060679-22061047 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-383
Cow position: chr20:8445910-8445529 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr20:826278-825893 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr20:6135493-6135877 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr20:12176992-12177377 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr20:20439471-20439857 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr20:31504831-31504443 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 25-387
Cow position: chr20:16515821-16515449 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 24

Conread position: 42-295
Cow position: chr20:20935655-20935918 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 108

Conread position: 42-386
Cow position: chr20:19364405-19364767 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 48-228
Cow position: chr20:5575747-5575572 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 102

Conread position: 48-369
Cow position: chr20:20364269-20364612 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 13

Conread position: 48-370
Cow position: chr20:25330690-25331023 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 87

Conread position: 49-246
Cow position: chr20:18322089-18322291 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 145

Conread position: 49-249
Cow position: chr20:26076031-26075820 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 39

Conread position: 49-289
Cow position: chr20:13050083-13050337 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 38

Conread position: 49-289
Cow position: chr20:26999970-26999714 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 147

Conread position: 49-301
Cow position: chr20:7995068-7995337 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 145

Conread position: 49-312
Cow position: chr20:19352601-19352875 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 138

Conread position: 49-368
Cow position: chr20:5085862-5086206 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 135

Conread position: 49-368
Cow position: chr20:15295492-15295151 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 15

Conread position: 49-368
Cow position: chr20:24399390-24399734 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 152

Conread position: 49-368
Cow position: chr20:26738252-26737908 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 135

Conread position: 49-368
Cow position: chr20:28560419-28560753 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 151

Conread position: 49-368
Cow position: chr20:28725233-28724888 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 64, 16

Conread position: 49-369
Cow position: chr20:19845250-19844907 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 136

Conread position: 49-371
Cow position: chr20:31846353-31846704 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 136

Conread position: 49-375
Cow position: chr20:22222129-22222480 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 320

Conread position: 49-383
Cow position: chr20:4205124-4204770 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 145

Conread position: 49-383
Cow position: chr20:25658548-25658907 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 49-383
Cow position: chr20:28956476-28956835 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 155

Conread position: 49-384
Cow position: chr20:29370946-29371306 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 51

Conread position: 49-386
Cow position: chr20:3808298-3808660 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr20:7568498-7568852 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 41

Conread position: 49-386
Cow position: chr20:7592984-7593339 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 155

Conread position: 49-386
Cow position: chr20:9339488-9339137 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 178

Conread position: 49-386
Cow position: chr20:9997011-9996647 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 49-386
Cow position: chr20:14925167-14925529 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 49-386
Cow position: chr20:18092427-18092788 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 15

Conread position: 49-386
Cow position: chr20:20731733-20731372 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 120

Conread position: 49-386
Cow position: chr20:21398292-21397932 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 153

Conread position: 49-386
Cow position: chr20:24904069-24904431 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 49-386
Cow position: chr20:28443874-28444235 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr20:30146906-30146548 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 99

Conread position: 49-386
Cow position: chr20:37154491-37154854 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 28, 135

Conread position: 49-388
Cow position: chr20:19155688-19156046 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 140

Conread position: 50-249
Cow position: chr20:25856642-25856438 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 50-272
Cow position: chr20:14877532-14877295 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 25, 149

Conread position: 50-298
Cow position: chr20:35112503-35112240 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 50

Conread position: 50-302
Cow position: chr20:37271744-37271476 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 153

Conread position: 50-306
Cow position: chr20:12155898-12156156 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 25, 160

Conread position: 50-311
Cow position: chr20:28113456-28113186 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 190

Conread position: 50-319
Cow position: chr20:6097196-6097476 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 137

Conread position: 50-362
Cow position: chr20:5269560-5269895 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 117

Conread position: 50-368
Cow position: chr20:7597384-7597726 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 29, 15

Conread position: 50-373
Cow position: chr20:25988223-25987881 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 25, 14

Conread position: 50-384
Cow position: chr20:13653866-13654215 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 145

Conread position: 50-386
Cow position: chr20:6239667-6240021 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 116

Conread position: 50-386
Cow position: chr20:9410838-9410477 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 50-386
Cow position: chr20:13506088-13506445 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 27, 159

Conread position: 52-384
Cow position: chr20:35094009-35093653 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 149

Conread position: 52-386
Cow position: chr20:15527217-15526858 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 132

Conread position: 63-386
Cow position: chr20:6476960-6476632 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 120

Conread position: 68-383
Cow position: chr20:14756819-14757154 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 23, 107

Conread position: 106-316
Cow position: chr20:28282473-28282260 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 61

Conread position: 109-244
Cow position: chr20:13501069-13500930 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 30

Conread position: 109-312
Cow position: chr20:32085049-32085259 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 109-368
Cow position: chr20:10790857-10790587 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 33

Conread position: 109-386
Cow position: chr20:20092703-20092412 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 64

Conread position: 109-386
Cow position: chr20:39234634-39234344 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 79

Conread position: 110-369
Cow position: chr20:6053963-6054225 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 141, 26

Conread position: 111-386
Cow position: chr20:30431672-30431385 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 84

Conread position: 112-249
Cow position: chr20:22064678-22064815 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 112-386
Cow position: chr20:30737674-30737387 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 60

Conread position: 118-318
Cow position: chr20:31078682-31078885 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 49

Conread position: 118-387
Cow position: chr20:32639405-32639122 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 61

Show alignments to all cow chromosomes.