Cow genome map
| Conread name: | Pig2-130F05 |
| Conread position: | 2-386 |
| Cow position: | chr23:2369266-2368867 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 7-252 |
| Cow position: | chr23:3167502-3167232 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 7-368 |
| Cow position: | chr23:6441592-6441959 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 12-386 |
| Cow position: | chr23:2320506-2320900 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 13-367 |
| Cow position: | chr23:41015372-41014991 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr23:10679390-10679772 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-369 |
| Cow position: | chr23:11079828-11079444 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 23, 198 |
| Conread position: | 13-384 |
| Cow position: | chr23:11070523-11070121 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 176 |
| Conread position: | 13-386 |
| Cow position: | chr23:771048-771448 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 190 |
| Conread position: | 13-386 |
| Cow position: | chr23:31704338-31703938 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 24-386 |
| Cow position: | chr23:21277213-21277591 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 25-284 |
| Cow position: | chr23:40773756-40773483 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-296 |
| Cow position: | chr23:8707819-8707532 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-316 |
| Cow position: | chr23:28987770-28987464 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-318 |
| Cow position: | chr23:27313273-27312964 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-367 |
| Cow position: | chr23:30623073-30623435 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 25-368 |
| Cow position: | chr23:1325887-1326253 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 25-368 |
| Cow position: | chr23:17846419-17846059 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 25-368 |
| Cow position: | chr23:25351788-25351421 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr23:5441345-5440978 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-369 |
| Cow position: | chr23:32007965-32008316 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-386 |
| Cow position: | chr23:5396151-5396537 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 25-386 |
| Cow position: | chr23:14215806-14216180 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr23:31605856-31605471 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 34-311 |
| Cow position: | chr23:31833584-31833872 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 48-316 |
| Cow position: | chr23:24487293-24487573 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 48-350 |
| Cow position: | chr23:34469003-34469320 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 49-250 |
| Cow position: | chr23:24098533-24098320 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-254 |
| Cow position: | chr23:1535528-1535314 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-275 |
| Cow position: | chr23:20025339-20025096 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 49-289 |
| Cow position: | chr23:40890176-40889925 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 49-297 |
| Cow position: | chr23:30243893-30243642 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 49-302 |
| Cow position: | chr23:671577-671307 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-312 |
| Cow position: | chr23:25670379-25670645 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 49-316 |
| Cow position: | chr23:5871000-5871275 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 49-316 |
| Cow position: | chr23:15180363-15180080 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 49-319 |
| Cow position: | chr23:17404019-17403731 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 49-362 |
| Cow position: | chr23:33817855-33817514 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 189 |
| Conread position: | 49-366 |
| Cow position: | chr23:1311165-1311507 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 232 |
| Conread position: | 49-366 |
| Cow position: | chr23:2791368-2791702 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 49-367 |
| Cow position: | chr23:2180443-2180784 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 49-368 |
| Cow position: | chr23:3877738-3878081 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 31, 135 |
| Conread position: | 49-368 |
| Cow position: | chr23:15528992-15528648 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-368 |
| Cow position: | chr23:26828654-26828314 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 49-369 |
| Cow position: | chr23:2408807-2409152 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 49-369 |
| Cow position: | chr23:7359861-7359521 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 172 |
| Conread position: | 49-369 |
| Cow position: | chr23:20152815-20153161 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 49-369 |
| Cow position: | chr23:21772504-21772850 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-369 |
| Cow position: | chr23:29459848-29460191 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 49-386 |
| Cow position: | chr23:954395-954753 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 49-386 |
| Cow position: | chr23:4437023-4436675 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 49-386 |
| Cow position: | chr23:14970549-14970908 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 49-386 |
| Cow position: | chr23:16495871-16496219 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 49-386 |
| Cow position: | chr23:25357751-25357389 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 22, 145 |
| Conread position: | 50-239 |
| Cow position: | chr23:1321992-1322191 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 50-307 |
| Cow position: | chr23:9193499-9193764 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 50-312 |
| Cow position: | chr23:416331-416053 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 50-316 |
| Cow position: | chr23:11128422-11128140 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 50-316 |
| Cow position: | chr23:14839784-14840048 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 50-367 |
| Cow position: | chr23:29625383-29625036 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 50-376 |
| Cow position: | chr23:6173616-6173959 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 50-386 |
| Cow position: | chr23:4532293-4532654 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 51-249 |
| Cow position: | chr23:23193029-23193234 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 51-368 |
| Cow position: | chr23:1010152-1010483 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 51-368 |
| Cow position: | chr23:5624176-5624511 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 51-388 |
| Cow position: | chr23:22143907-22144267 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 57-316 |
| Cow position: | chr23:21351554-21351827 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 58-298 |
| Cow position: | chr23:3730189-3730446 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 58-353 |
| Cow position: | chr23:29447854-29448172 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 74-367 |
| Cow position: | chr23:26318656-26318346 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 141 |
| Conread position: | 109-312 |
| Cow position: | chr23:29935608-29935399 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 109-368 |
| Cow position: | chr23:21008271-21008543 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 111-316 |
| Cow position: | chr23:15567675-15567885 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 111-387 |
| Cow position: | chr23:13536754-13536475 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 118-372 |
| Cow position: | chr23:2737545-2737279 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 123-368 |
| Cow position: | chr23:3417009-3417267 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 78, 49 |
Show alignments to all cow chromosomes.