Cow genome map
| Conread name: | Pig2-130F05 |
| Conread position: | 2-370 |
| Cow position: | chr25:18490307-18489914 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 6-386 |
| Cow position: | chr25:26353551-26353951 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 13-303 |
| Cow position: | chr25:17554029-17554334 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 23, 169 |
| Conread position: | 13-307 |
| Cow position: | chr25:11124999-11124686 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr25:7223199-7223580 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr25:17904873-17904491 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 18-303 |
| Cow position: | chr25:4372471-4372766 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 25-272 |
| Cow position: | chr25:29357794-29358057 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-316 |
| Cow position: | chr25:19923739-19923438 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-355 |
| Cow position: | chr25:35589295-35588942 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr25:19139354-19139721 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr25:26705664-26706031 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 25-368 |
| Cow position: | chr25:29525649-29526010 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr25:31073378-31073745 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 25-369 |
| Cow position: | chr25:35553886-35553520 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 25-374 |
| Cow position: | chr25:32610202-32610564 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-385 |
| Cow position: | chr25:17585804-17586186 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-386 |
| Cow position: | chr25:18190160-18190539 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-386 |
| Cow position: | chr25:26780868-26781249 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-386 |
| Cow position: | chr25:27019020-27019404 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr25:32577444-32577829 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 25-386 |
| Cow position: | chr25:34508964-34509346 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr25:36350956-36350573 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 28-358 |
| Cow position: | chr25:6955283-6954929 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 28-386 |
| Cow position: | chr25:29802530-29802912 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 35-316 |
| Cow position: | chr25:37593610-37593313 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 48-386 |
| Cow position: | chr25:21903634-21903283 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 49-175 |
| Cow position: | chr25:20613730-20613599 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 49-247 |
| Cow position: | chr25:4522616-4522826 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 49-283 |
| Cow position: | chr25:34343713-34343962 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 49-290 |
| Cow position: | chr25:28275473-28275729 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-302 |
| Cow position: | chr25:23361680-23361415 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 49-303 |
| Cow position: | chr25:18486654-18486390 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 102 |
| Conread position: | 49-309 |
| Cow position: | chr25:40322095-40322370 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-316 |
| Cow position: | chr25:12756225-12756513 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 49-316 |
| Cow position: | chr25:33262824-33262536 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 49-316 |
| Cow position: | chr25:35372418-35372702 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-319 |
| Cow position: | chr25:23913863-23913580 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 49-366 |
| Cow position: | chr25:37648612-37648285 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 49-368 |
| Cow position: | chr25:10633814-10634155 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 49-368 |
| Cow position: | chr25:13960257-13959922 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 147 |
| Conread position: | 49-368 |
| Cow position: | chr25:18072420-18072087 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 49-368 |
| Cow position: | chr25:35755049-35755392 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 49-369 |
| Cow position: | chr25:393456-393120 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 49-369 |
| Cow position: | chr25:26931291-26930946 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 49-372 |
| Cow position: | chr25:11665858-11665523 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 137 |
| Conread position: | 49-385 |
| Cow position: | chr25:11043814-11043455 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-386 |
| Cow position: | chr25:9395604-9395248 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 49-386 |
| Cow position: | chr25:10137008-10136656 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 49-386 |
| Cow position: | chr25:11956026-11955664 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-386 |
| Cow position: | chr25:13429917-13430274 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 49-386 |
| Cow position: | chr25:18474393-18474039 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 30, 166 |
| Conread position: | 49-386 |
| Cow position: | chr25:20772139-20772493 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-386 |
| Cow position: | chr25:23998994-23999344 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 49-386 |
| Cow position: | chr25:24204939-24205278 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 49-386 |
| Cow position: | chr25:41135553-41135910 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 30, 119 |
| Conread position: | 49-389 |
| Cow position: | chr25:14756216-14756579 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 50-268 |
| Cow position: | chr25:28264541-28264314 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 217 |
| Conread position: | 50-294 |
| Cow position: | chr25:18330581-18330843 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 50-298 |
| Cow position: | chr25:16922597-16922860 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 50-316 |
| Cow position: | chr25:25480412-25480687 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 50-359 |
| Cow position: | chr25:12082157-12082485 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 50-386 |
| Cow position: | chr25:19337133-19337488 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 50-386 |
| Cow position: | chr25:24303073-24303432 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 52-283 |
| Cow position: | chr25:8655483-8655234 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 55-366 |
| Cow position: | chr25:2594951-2594625 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 68-385 |
| Cow position: | chr25:28420527-28420866 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 118-353 |
| Cow position: | chr25:39513140-39512885 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 118-376 |
| Cow position: | chr25:21949912-21949644 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 120, 228 |
Show alignments to all cow chromosomes.