Cow genome map
| Conread name: | Pig2-130F05 |
| Conread position: | 6-369 |
| Cow position: | chr27:19932135-19932505 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 13-289 |
| Cow position: | chr27:9970615-9970320 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-386 |
| Cow position: | chr27:10579387-10578991 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 14-368 |
| Cow position: | chr27:14380742-14380383 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 14-386 |
| Cow position: | chr27:1521115-1520724 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 16-376 |
| Cow position: | chr27:8291278-8290896 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 25-301 |
| Cow position: | chr27:10383860-10383585 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 25-302 |
| Cow position: | chr27:22647203-22647496 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr27:11481360-11480993 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 25-368 |
| Cow position: | chr27:12006577-12006210 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr27:29035953-29036307 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr27:2001274-2000907 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr27:2557564-2557930 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 25-369 |
| Cow position: | chr27:27045603-27045244 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 25-386 |
| Cow position: | chr27:5983601-5983986 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr27:14297636-14297251 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 30-368 |
| Cow position: | chr27:13309068-13308706 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 32-386 |
| Cow position: | chr27:165496-165875 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 41-386 |
| Cow position: | chr27:25971186-25971557 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 46-371 |
| Cow position: | chr27:6523871-6524218 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 48-298 |
| Cow position: | chr27:2681927-2681661 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 152 |
| Conread position: | 49-216 |
| Cow position: | chr27:9090045-9089872 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 49-250 |
| Cow position: | chr27:15866897-15867102 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 49-254 |
| Cow position: | chr27:21350253-21350037 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 49-289 |
| Cow position: | chr27:30036277-30036024 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 49-311 |
| Cow position: | chr27:21392416-21392139 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 49-367 |
| Cow position: | chr27:30783309-30782968 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-368 |
| Cow position: | chr27:3990394-3990738 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-368 |
| Cow position: | chr27:15272670-15273006 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 49-368 |
| Cow position: | chr27:22797253-22797595 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-369 |
| Cow position: | chr27:8972850-8972505 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 49-369 |
| Cow position: | chr27:26785223-26784883 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 49-370 |
| Cow position: | chr27:15375209-15374879 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 49-371 |
| Cow position: | chr27:1536575-1536238 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 49-378 |
| Cow position: | chr27:15871922-15872267 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 49-386 |
| Cow position: | chr27:1189068-1188710 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 146 |
| Conread position: | 49-386 |
| Cow position: | chr27:12277511-12277155 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 49-386 |
| Cow position: | chr27:16030991-16031353 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 49-386 |
| Cow position: | chr27:25800805-25801161 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 141 |
| Conread position: | 49-386 |
| Cow position: | chr27:27279120-27278768 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 50-246 |
| Cow position: | chr27:25112566-25112359 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 155 |
| Conread position: | 50-316 |
| Cow position: | chr27:13316964-13316685 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 50-316 |
| Cow position: | chr27:15697748-15697472 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 50-359 |
| Cow position: | chr27:14669595-14669268 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 184 |
| Conread position: | 50-362 |
| Cow position: | chr27:15406027-15405708 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 256 |
| Conread position: | 50-368 |
| Cow position: | chr27:5925667-5925335 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 50-384 |
| Cow position: | chr27:4805195-4804834 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 50-386 |
| Cow position: | chr27:3653295-3653656 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 50-386 |
| Cow position: | chr27:13353711-13353350 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 51-386 |
| Cow position: | chr27:8592790-8592443 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 103 |
| Conread position: | 54-386 |
| Cow position: | chr27:13182884-13183219 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 58-368 |
| Cow position: | chr27:5914328-5913996 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 59-368 |
| Cow position: | chr27:31249631-31249304 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 109-368 |
| Cow position: | chr27:15544349-15544077 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 109-369 |
| Cow position: | chr27:8427192-8426918 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 70 |
| Conread position: | 109-369 |
| Cow position: | chr27:28051451-28051722 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 119 |
| Conread position: | 109-453 |
| Cow position: | chr27:20001739-20001392 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 134, 74 |
| Conread position: | 111-386 |
| Cow position: | chr27:5990714-5991000 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 65 |
Show alignments to all cow chromosomes.