Cow genome map

Conread name: Pig2-130F05

Conread position: 2-312
Cow position: chr28:1837272-1836965 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 102, 47

Conread position: 3-386
Cow position: chr28:21379990-21379596 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 9

Conread position: 6-369
Cow position: chr28:958349-957981 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 5

Conread position: 8-359
Cow position: chr28:8971565-8971194 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 5

Conread position: 13-302
Cow position: chr28:32589189-32588881 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 173

Conread position: 13-354
Cow position: chr28:15054646-15054278 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 173

Conread position: 13-360
Cow position: chr28:24992977-24992603 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 173

Conread position: 13-368
Cow position: chr28:7059720-7059338 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 173

Conread position: 13-368
Cow position: chr28:25850051-25849669 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 173

Conread position: 13-386
Cow position: chr28:3627503-3627103 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 196

Conread position: 13-386
Cow position: chr28:9287903-9288303 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 13-386
Cow position: chr28:28471509-28471115 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 15

Conread position: 13-387
Cow position: chr28:1956853-1956458 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 30

Conread position: 25-295
Cow position: chr28:29222810-29223096 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 15

Conread position: 25-316
Cow position: chr28:1943821-1944127 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 15

Conread position: 25-316
Cow position: chr28:28723698-28723396 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 14

Conread position: 25-368
Cow position: chr28:5312449-5312082 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr28:6471965-6472329 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 15

Conread position: 25-368
Cow position: chr28:13323608-13323241 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr28:16597622-16597257 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 15

Conread position: 25-369
Cow position: chr28:23309861-23310229 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 25-378
Cow position: chr28:25828870-25828500 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr28:5637525-5637141 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:6478693-6478309 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 15

Conread position: 25-386
Cow position: chr28:6535323-6535708 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr28:6776528-6776913 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr28:7336458-7336073 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr28:7907071-7907455 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 25-386
Cow position: chr28:9182344-9181959 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:10194130-10194515 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:10303312-10302928 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr28:15917052-15917435 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 24

Conread position: 25-386
Cow position: chr28:16181843-16181458 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:20967194-20967579 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:21896757-21896372 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr28:24886335-24885950 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 25-386
Cow position: chr28:28357309-28357694 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr28:28934488-28934873 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 15

Conread position: 25-387
Cow position: chr28:4214365-4213983 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 24

Conread position: 28-368
Cow position: chr28:13463435-13463071 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 21

Conread position: 40-320
Cow position: chr28:2222903-2223202 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 42-169
Cow position: chr28:15498022-15498153 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 48-369
Cow position: chr28:22201404-22201067 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 169

Conread position: 48-386
Cow position: chr28:4817220-4816868 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 17

Conread position: 49-244
Cow position: chr28:16211883-16212083 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 195

Conread position: 49-248
Cow position: chr28:15715423-15715213 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 117

Conread position: 49-316
Cow position: chr28:13725385-13725103 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 49-316
Cow position: chr28:24487935-24488217 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 105

Conread position: 49-316
Cow position: chr28:29806989-29807271 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 135

Conread position: 49-329
Cow position: chr28:13373095-13373384 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 131

Conread position: 49-351
Cow position: chr28:8786768-8786437 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 49-352
Cow position: chr28:3001407-3001732 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 140

Conread position: 49-360
Cow position: chr28:15265930-15266273 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 188

Conread position: 49-362
Cow position: chr28:13606882-13606546 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 136

Conread position: 49-367
Cow position: chr28:7784771-7785113 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 270

Conread position: 49-368
Cow position: chr28:12650670-12650338 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 151

Conread position: 49-368
Cow position: chr28:14150440-14150102 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 142

Conread position: 49-368
Cow position: chr28:25070299-25069949 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 150

Conread position: 49-369
Cow position: chr28:3745408-3745079 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 250

Conread position: 49-369
Cow position: chr28:5804718-5804377 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 156

Conread position: 49-369
Cow position: chr28:10479445-10479781 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 184

Conread position: 49-369
Cow position: chr28:16041228-16041547 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 62

Conread position: 49-369
Cow position: chr28:21569348-21569010 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 145

Conread position: 49-369
Cow position: chr28:29435355-29435687 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 145

Conread position: 49-369
Cow position: chr28:32301135-32301480 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 20

Conread position: 49-372
Cow position: chr28:10295251-10294914 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 101

Conread position: 49-376
Cow position: chr28:18140262-18140597 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 173

Conread position: 49-386
Cow position: chr28:444860-444498 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 142

Conread position: 49-386
Cow position: chr28:2645165-2644805 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 109

Conread position: 49-386
Cow position: chr28:6473804-6474162 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 145

Conread position: 49-386
Cow position: chr28:11501770-11502126 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 152

Conread position: 49-389
Cow position: chr28:4958054-4958417 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 122

Conread position: 50-245
Cow position: chr28:20310386-20310180 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 125

Conread position: 50-302
Cow position: chr28:17762090-17761821 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 183

Conread position: 50-309
Cow position: chr28:12429656-12429383 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 129

Conread position: 50-312
Cow position: chr28:34677756-34678024 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 50-338
Cow position: chr28:17602590-17602901 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 152

Conread position: 50-368
Cow position: chr28:3004067-3004413 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 139

Conread position: 50-369
Cow position: chr28:14511883-14511549 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 128

Conread position: 50-369
Cow position: chr28:17030647-17030985 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 50-384
Cow position: chr28:10280291-10279944 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 179

Conread position: 51-300
Cow position: chr28:14234197-14233949 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 205

Conread position: 51-363
Cow position: chr28:10643093-10643410 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 63

Conread position: 51-371
Cow position: chr28:26923179-26923525 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 143

Conread position: 51-373
Cow position: chr28:1384003-1384352 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 143

Conread position: 51-386
Cow position: chr28:482259-482618 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 149

Conread position: 58-319
Cow position: chr28:25847444-25847176 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 86

Conread position: 65-372
Cow position: chr28:23025808-23025478 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 134

Conread position: 109-314
Cow position: chr28:12170016-12169813 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 33

Conread position: 109-368
Cow position: chr28:4929070-4929342 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 63

Conread position: 109-368
Cow position: chr28:7443089-7443361 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 92, 63

Conread position: 109-369
Cow position: chr28:331520-331793 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 39

Conread position: 109-373
Cow position: chr28:15589454-15589174 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 58

Conread position: 109-386
Cow position: chr28:15604997-15604701 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 63

Conread position: 110-386
Cow position: chr28:28929211-28928926 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 52

Show alignments to all cow chromosomes.