Cow genome map

Conread name: Pig2-130F05

Conread position: 2-369
Cow position: chr29:16035943-16036339 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 13-302
Cow position: chr29:11119251-11119559 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 173

Conread position: 13-368
Cow position: chr29:3330053-3329671 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 173

Conread position: 13-368
Cow position: chr29:18011036-18010654 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 173

Conread position: 13-369
Cow position: chr29:32556283-32556666 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 193

Conread position: 14-385
Cow position: chr29:32800731-32800338 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 116

Conread position: 14-386
Cow position: chr29:27702537-27702138 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 189

Conread position: 16-386
Cow position: chr29:17408583-17408193 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 135

Conread position: 19-312
Cow position: chr29:5977857-5978175 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 227

Conread position: 25-250
Cow position: chr29:5785940-5785704 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 25

Conread position: 25-288
Cow position: chr29:32316515-32316237 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 15

Conread position: 25-301
Cow position: chr29:34851200-34850911 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 15

Conread position: 25-316
Cow position: chr29:1688188-1687887 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 52, 15

Conread position: 25-316
Cow position: chr29:24983125-24983428 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:10452370-10452736 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 15

Conread position: 25-368
Cow position: chr29:15072035-15072402 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:21474595-21474228 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 25-368
Cow position: chr29:22746346-22745979 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:32515774-32515407 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:40157190-40156823 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:40294753-40294386 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-368
Cow position: chr29:42255532-42255899 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 16

Conread position: 25-369
Cow position: chr29:38409643-38409271 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 52, 14

Conread position: 25-371
Cow position: chr29:16065156-16064787 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 15

Conread position: 25-384
Cow position: chr29:7847838-7847450 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr29:13623928-13624313 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr29:21227421-21227037 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 15

Conread position: 25-386
Cow position: chr29:24806901-24806516 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 28-386
Cow position: chr29:31184819-31184437 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 12

Conread position: 28-386
Cow position: chr29:31765483-31765101 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 30-386
Cow position: chr29:15966113-15966493 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 10

Conread position: 40-374
Cow position: chr29:35739269-35739617 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 140

Conread position: 48-370
Cow position: chr29:7748289-7748618 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 17

Conread position: 49-176
Cow position: chr29:18365200-18365339 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 49-236
Cow position: chr29:4875716-4875907 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 64, 25

Conread position: 49-249
Cow position: chr29:960624-960412 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 152

Conread position: 49-249
Cow position: chr29:7289967-7289760 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 49-267
Cow position: chr29:24951892-24951658 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 26, 45

Conread position: 49-287
Cow position: chr29:32643978-32643735 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 108

Conread position: 49-300
Cow position: chr29:9939371-9939646 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 49-309
Cow position: chr29:26263046-26262768 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 160

Conread position: 49-316
Cow position: chr29:14313727-14314010 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 135

Conread position: 49-316
Cow position: chr29:16185356-16185640 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 135

Conread position: 49-350
Cow position: chr29:9639106-9639433 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 140

Conread position: 49-353
Cow position: chr29:20999634-20999331 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 169

Conread position: 49-368
Cow position: chr29:5240818-5240473 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 64, 151

Conread position: 49-368
Cow position: chr29:10643992-10644332 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 134

Conread position: 49-368
Cow position: chr29:13099595-13099249 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 154

Conread position: 49-368
Cow position: chr29:15943771-15943432 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 136

Conread position: 49-368
Cow position: chr29:32543560-32543217 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 25

Conread position: 49-368
Cow position: chr29:35002251-35002578 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 32, 135

Conread position: 49-368
Cow position: chr29:35273616-35273960 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 30, 135

Conread position: 49-369
Cow position: chr29:1478874-1478530 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 135

Conread position: 49-369
Cow position: chr29:4864743-4864404 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 153

Conread position: 49-369
Cow position: chr29:11786425-11786081 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 145

Conread position: 49-369
Cow position: chr29:21255374-21255040 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 152

Conread position: 49-369
Cow position: chr29:32732521-32732178 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 133

Conread position: 49-372
Cow position: chr29:32962728-32962389 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 49-383
Cow position: chr29:2307424-2307066 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 154

Conread position: 49-386
Cow position: chr29:607225-607576 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr29:727152-726790 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr29:13585632-13585277 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 129

Conread position: 49-386
Cow position: chr29:17153659-17153306 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 151

Conread position: 49-386
Cow position: chr29:21429437-21429799 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 28, 135

Conread position: 49-386
Cow position: chr29:24578075-24577713 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 151

Conread position: 49-386
Cow position: chr29:28656945-28657307 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 49-386
Cow position: chr29:32289807-32289452 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 111

Conread position: 49-386
Cow position: chr29:32292017-32291654 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 142

Conread position: 49-417
Cow position: chr29:27976582-27976974 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 135

Conread position: 50-211
Cow position: chr29:19761480-19761309 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 128

Conread position: 50-316
Cow position: chr29:14037436-14037708 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 101

Conread position: 50-362
Cow position: chr29:3584796-3585127 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 29, 127

Conread position: 50-366
Cow position: chr29:27857979-27857653 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 91

Conread position: 50-369
Cow position: chr29:6871862-6872196 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 104

Conread position: 50-379
Cow position: chr29:7700970-7701317 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 50-386
Cow position: chr29:4164110-4163749 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 134

Conread position: 50-386
Cow position: chr29:32353017-32352679 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 158

Conread position: 50-388
Cow position: chr29:12798005-12797643 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 145

Conread position: 51-317
Cow position: chr29:4366580-4366304 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 143

Conread position: 59-386
Cow position: chr29:45651130-45651489 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 140

Conread position: 77-338
Cow position: chr29:27823513-27823239 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 226

Conread position: 78-368
Cow position: chr29:4200759-4200457 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 11

Conread position: 84-302
Cow position: chr29:40116682-40116457 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 109-368
Cow position: chr29:38746399-38746127 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 92, 63

Conread position: 109-386
Cow position: chr29:43964209-43964495 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 76

Conread position: 110-383
Cow position: chr29:29589645-29589927 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 80

Show alignments to all cow chromosomes.