Cow genome map
| Conread name: | Pig2-130F05 |
| Conread position: | 2-386 |
| Cow position: | chr5:46685333-46685734 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 12-311 |
| Cow position: | chr5:38738296-38737992 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 13-302 |
| Cow position: | chr5:26053011-26052703 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-315 |
| Cow position: | chr5:64061607-64061287 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 13-368 |
| Cow position: | chr5:1059287-1059669 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 190 |
| Conread position: | 13-368 |
| Cow position: | chr5:29634709-29634327 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr5:36906782-36907164 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-368 |
| Cow position: | chr5:42283443-42283068 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 13-368 |
| Cow position: | chr5:54136358-54136740 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 173 |
| Conread position: | 13-369 |
| Cow position: | chr5:10772550-10772928 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 13-386 |
| Cow position: | chr5:54927642-54928039 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 13-386 |
| Cow position: | chr5:54929970-54930367 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 13-386 |
| Cow position: | chr5:58192195-58191797 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 21-369 |
| Cow position: | chr5:41488939-41488567 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 25-250 |
| Cow position: | chr5:39363137-39362901 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-278 |
| Cow position: | chr5:1395197-1395462 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-295 |
| Cow position: | chr5:12337539-12337253 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-296 |
| Cow position: | chr5:445744-445457 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-298 |
| Cow position: | chr5:57336099-57336388 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-310 |
| Cow position: | chr5:12212798-12212497 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-311 |
| Cow position: | chr5:4753868-4754170 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-316 |
| Cow position: | chr5:21188199-21187892 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-316 |
| Cow position: | chr5:45179582-45179888 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-316 |
| Cow position: | chr5:47471661-47471351 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 25-349 |
| Cow position: | chr5:26073523-26073860 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-367 |
| Cow position: | chr5:24632774-24633140 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-368 |
| Cow position: | chr5:6772830-6772466 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 25-368 |
| Cow position: | chr5:24101915-24101548 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 25-368 |
| Cow position: | chr5:24577701-24577334 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 25-368 |
| Cow position: | chr5:29223000-29223361 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-368 |
| Cow position: | chr5:46676878-46676511 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-368 |
| Cow position: | chr5:54951857-54952224 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 25-368 |
| Cow position: | chr5:59146642-59146275 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-369 |
| Cow position: | chr5:443044-443412 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 25-369 |
| Cow position: | chr5:4015607-4015973 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-369 |
| Cow position: | chr5:6455398-6455766 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-369 |
| Cow position: | chr5:27549249-27549593 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 25-369 |
| Cow position: | chr5:41067275-41066922 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-385 |
| Cow position: | chr5:51166045-51166428 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:4434239-4434624 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:5106488-5106105 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:5924712-5925079 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:6124897-6125282 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-386 |
| Cow position: | chr5:10066285-10066670 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:11631720-11632105 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:14543036-14543420 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:15761105-15761489 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:18667572-18667187 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:29255949-29256331 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:36369727-36370112 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:37380351-37379967 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:44617410-44617025 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 25-386 |
| Cow position: | chr5:49221234-49221612 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:53075605-53075989 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 25-386 |
| Cow position: | chr5:58199274-58198890 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 25-386 |
| Cow position: | chr5:72857140-72856754 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 25-389 |
| Cow position: | chr5:6585189-6585576 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 28-369 |
| Cow position: | chr5:46667336-46666971 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 28-386 |
| Cow position: | chr5:12133855-12133477 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 33-272 |
| Cow position: | chr5:4165884-4165633 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 42-238 |
| Cow position: | chr5:28026643-28026440 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 42-248 |
| Cow position: | chr5:16894901-16895115 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 155 |
| Conread position: | 42-386 |
| Cow position: | chr5:9091177-9091542 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 48-302 |
| Cow position: | chr5:22857390-22857662 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 48-369 |
| Cow position: | chr5:71738354-71738011 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 49-188 |
| Cow position: | chr5:39448305-39448454 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 49-218 |
| Cow position: | chr5:6670931-6671108 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 49-230 |
| Cow position: | chr5:15362286-15362093 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-232 |
| Cow position: | chr5:46797142-46796955 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 49-233 |
| Cow position: | chr5:60446674-60446479 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 49-286 |
| Cow position: | chr5:40928784-40929031 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 49-290 |
| Cow position: | chr5:55722771-55722513 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 49-311 |
| Cow position: | chr5:72046422-72046700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 49-316 |
| Cow position: | chr5:26096513-26096243 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 49-316 |
| Cow position: | chr5:41954064-41954333 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 49-321 |
| Cow position: | chr5:28947169-28947449 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 49-340 |
| Cow position: | chr5:50899875-50899570 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 138 |
| Conread position: | 49-363 |
| Cow position: | chr5:19969800-19970129 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 49-364 |
| Cow position: | chr5:5937548-5937208 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-366 |
| Cow position: | chr5:27178877-27178548 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 49-366 |
| Cow position: | chr5:41548309-41548634 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 49-366 |
| Cow position: | chr5:55631306-55630964 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 49-368 |
| Cow position: | chr5:295507-295163 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 49-368 |
| Cow position: | chr5:1338679-1339024 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 49-368 |
| Cow position: | chr5:2917703-2917362 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 49-368 |
| Cow position: | chr5:5715848-5716156 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 49-368 |
| Cow position: | chr5:18558167-18558505 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 49-368 |
| Cow position: | chr5:26135026-26135375 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 49-369 |
| Cow position: | chr5:5682267-5682614 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 49-369 |
| Cow position: | chr5:18404816-18405154 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 30, 133 |
| Conread position: | 49-369 |
| Cow position: | chr5:18901561-18901231 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 49-369 |
| Cow position: | chr5:29769302-29768956 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 49-369 |
| Cow position: | chr5:30294545-30294216 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 49-369 |
| Cow position: | chr5:41228807-41229150 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 49-369 |
| Cow position: | chr5:51502126-51501781 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 49-369 |
| Cow position: | chr5:59064685-59064341 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 49-369 |
| Cow position: | chr5:62377607-62377271 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 49-374 |
| Cow position: | chr5:34300122-34299784 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 49-377 |
| Cow position: | chr5:56442499-56442148 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 49-378 |
| Cow position: | chr5:67654566-67654216 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 49-383 |
| Cow position: | chr5:15723073-15723444 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 49-384 |
| Cow position: | chr5:4348757-4349107 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 49-384 |
| Cow position: | chr5:42744032-42743690 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 49-386 |
| Cow position: | chr5:709909-710271 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-386 |
| Cow position: | chr5:1383219-1382861 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 49-386 |
| Cow position: | chr5:2977027-2976666 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 49-386 |
| Cow position: | chr5:4630002-4629650 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 49-386 |
| Cow position: | chr5:18118733-18119095 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-386 |
| Cow position: | chr5:21828064-21827707 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 49-386 |
| Cow position: | chr5:24643632-24643982 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 220 |
| Conread position: | 49-386 |
| Cow position: | chr5:25912960-25912613 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 133 |
| Conread position: | 49-386 |
| Cow position: | chr5:25920545-25920893 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 49-386 |
| Cow position: | chr5:27907226-27907586 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 49-386 |
| Cow position: | chr5:31709542-31709180 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-386 |
| Cow position: | chr5:32964818-32965186 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 49-386 |
| Cow position: | chr5:47855069-47854715 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 211 |
| Conread position: | 49-386 |
| Cow position: | chr5:47871866-47872226 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 49-386 |
| Cow position: | chr5:48026510-48026150 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 49-386 |
| Cow position: | chr5:52822966-52823326 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 49-387 |
| Cow position: | chr5:6572009-6572359 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 49-387 |
| Cow position: | chr5:46626035-46626393 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 49-461 |
| Cow position: | chr5:24159177-24158742 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 50-252 |
| Cow position: | chr5:6044239-6044028 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 50-316 |
| Cow position: | chr5:6576351-6576634 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 50-316 |
| Cow position: | chr5:32810784-32811069 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 50-319 |
| Cow position: | chr5:68593661-68593388 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 50-338 |
| Cow position: | chr5:23648189-23648497 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 50-367 |
| Cow position: | chr5:34559386-34559034 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 50-369 |
| Cow position: | chr5:71456806-71457149 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 50-372 |
| Cow position: | chr5:42676484-42676155 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 50-384 |
| Cow position: | chr5:34669848-34670206 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 50-386 |
| Cow position: | chr5:34683121-34683480 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 50-386 |
| Cow position: | chr5:53834893-53834534 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 51-249 |
| Cow position: | chr5:21524293-21524083 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 51-301 |
| Cow position: | chr5:76098790-76099057 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 51-368 |
| Cow position: | chr5:68337276-68337599 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 51-381 |
| Cow position: | chr5:64845028-64845381 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 52-368 |
| Cow position: | chr5:38848346-38848687 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 55-386 |
| Cow position: | chr5:62436359-62436006 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 57-369 |
| Cow position: | chr5:20107793-20108130 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 144 |
| Conread position: | 59-386 |
| Cow position: | chr5:62159693-62160044 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 60-290 |
| Cow position: | chr5:57935902-57936138 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 60-318 |
| Cow position: | chr5:51293730-51294005 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 61-384 |
| Cow position: | chr5:48535077-48534736 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 64-386 |
| Cow position: | chr5:17027295-17026958 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 94-386 |
| Cow position: | chr5:23642033-23642332 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 109-316 |
| Cow position: | chr5:46587836-46588046 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 109-319 |
| Cow position: | chr5:70531297-70531507 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 109-360 |
| Cow position: | chr5:59071873-59072138 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 109-368 |
| Cow position: | chr5:2203221-2203493 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 109-368 |
| Cow position: | chr5:2695632-2695904 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 92, 78 |
| Conread position: | 109-368 |
| Cow position: | chr5:10299638-10299366 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 109-368 |
| Cow position: | chr5:11358296-11358024 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 109-368 |
| Cow position: | chr5:13630324-13630596 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 109-368 |
| Cow position: | chr5:30157530-30157258 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 109-369 |
| Cow position: | chr5:37626029-37625758 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 110-386 |
| Cow position: | chr5:18491571-18491286 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 114-368 |
| Cow position: | chr5:66910269-66910002 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 114-386 |
| Cow position: | chr5:38662497-38662212 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 119-287 |
| Cow position: | chr5:742586-742756 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 119-354 |
| Cow position: | chr5:14942656-14942904 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 82, 53 |
Show alignments to all cow chromosomes.