Cow genome map
| Conread name: | Pig2-130H03 |
| Conread position: | 1-136 |
| Cow position: | chr13:16187862-16187997 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 1-136 |
| Cow position: | chr13:18243896-18243761 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-141 |
| Cow position: | chr13:8201448-8201589 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 1-149 |
| Cow position: | chr13:20649949-20650101 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-151 |
| Cow position: | chr13:49022831-49022984 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-154 |
| Cow position: | chr13:43139179-43139333 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 1-158 |
| Cow position: | chr13:51856851-51857008 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-159 |
| Cow position: | chr13:8652404-8652567 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-161 |
| Cow position: | chr13:5758306-5758469 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-162 |
| Cow position: | chr13:8555493-8555338 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-162 |
| Cow position: | chr13:37946915-37947078 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 1-163 |
| Cow position: | chr13:12546876-12547036 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-163 |
| Cow position: | chr13:15192855-15193014 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 1-163 |
| Cow position: | chr13:16014848-16014683 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-163 |
| Cow position: | chr13:17822916-17823078 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 1-164 |
| Cow position: | chr13:49520787-49520951 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 1-167 |
| Cow position: | chr13:52749443-52749603 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 1-169 |
| Cow position: | chr13:827277-827111 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-169 |
| Cow position: | chr13:9593543-9593371 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 1-169 |
| Cow position: | chr13:15281905-15282069 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 1-169 |
| Cow position: | chr13:42200654-42200484 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-170 |
| Cow position: | chr13:25537661-25537488 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-173 |
| Cow position: | chr13:584836-585009 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 1-173 |
| Cow position: | chr13:7149478-7149646 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-173 |
| Cow position: | chr13:11260305-11260136 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 1-173 |
| Cow position: | chr13:34873626-34873450 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-176 |
| Cow position: | chr13:17563771-17563598 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 1-176 |
| Cow position: | chr13:17837984-17837809 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-177 |
| Cow position: | chr13:2414063-2413888 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-177 |
| Cow position: | chr13:18166768-18166591 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 1-177 |
| Cow position: | chr13:41157439-41157264 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 1-178 |
| Cow position: | chr13:19188335-19188157 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 1-178 |
| Cow position: | chr13:37521707-37521888 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 1-179 |
| Cow position: | chr13:59170686-59170508 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 1-182 |
| Cow position: | chr13:19778814-19778999 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 1-182 |
| Cow position: | chr13:20879789-20879971 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 1-184 |
| Cow position: | chr13:3211586-3211400 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 177 |
| Conread position: | 1-184 |
| Cow position: | chr13:21283667-21283854 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 1-184 |
| Cow position: | chr13:55727935-55727754 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-185 |
| Cow position: | chr13:6616717-6616904 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 172 |
| Conread position: | 1-185 |
| Cow position: | chr13:12925808-12925628 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 1-185 |
| Cow position: | chr13:14771490-14771303 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 1-185 |
| Cow position: | chr13:20271192-20271375 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 130, 82 |
| Conread position: | 1-185 |
| Cow position: | chr13:24230244-24230064 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-185 |
| Cow position: | chr13:55162246-55162061 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 1-188 |
| Cow position: | chr13:20137859-20137669 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 1-188 |
| Cow position: | chr13:20174783-20174590 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 63, 166 |
| Conread position: | 1-188 |
| Cow position: | chr13:20360311-20360127 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-188 |
| Cow position: | chr13:21275892-21275707 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-188 |
| Cow position: | chr13:25579153-25579342 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 1-188 |
| Cow position: | chr13:42672387-42672578 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 19, 181 |
| Conread position: | 1-188 |
| Cow position: | chr13:46112001-46111819 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 1-188 |
| Cow position: | chr13:52640915-52641100 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-189 |
| Cow position: | chr13:17158840-17159031 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 158 |
| Conread position: | 1-190 |
| Cow position: | chr13:60509083-60509274 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 1-191 |
| Cow position: | chr13:62008147-62007948 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-293 |
| Cow position: | chr13:38278114-38278395 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 1-296 |
| Cow position: | chr13:17622319-17622018 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 181, 19 |
| Conread position: | 1-296 |
| Cow position: | chr13:36771385-36771676 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 1-297 |
| Cow position: | chr13:11096209-11095929 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-297 |
| Cow position: | chr13:13176686-13176396 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 200 |
| Conread position: | 2-140 |
| Cow position: | chr13:60389459-60389593 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-154 |
| Cow position: | chr13:10845629-10845485 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-162 |
| Cow position: | chr13:24715277-24715114 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-162 |
| Cow position: | chr13:40541072-40541232 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 2-163 |
| Cow position: | chr13:14576243-14576085 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 2-163 |
| Cow position: | chr13:23270176-23270333 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-164 |
| Cow position: | chr13:25695734-25695896 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 2-165 |
| Cow position: | chr13:185567-185400 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-169 |
| Cow position: | chr13:8233029-8232868 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-182 |
| Cow position: | chr13:51115987-51116171 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-188 |
| Cow position: | chr13:25547552-25547734 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-189 |
| Cow position: | chr13:25926827-25926634 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-190 |
| Cow position: | chr13:6861216-6861025 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-190 |
| Cow position: | chr13:43919228-43919416 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-155 |
| Cow position: | chr13:6060974-6061128 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-163 |
| Cow position: | chr13:5263252-5263409 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-163 |
| Cow position: | chr13:40491250-40491086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-164 |
| Cow position: | chr13:6342055-6342217 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 3-173 |
| Cow position: | chr13:6974193-6974023 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 162, 143 |
| Conread position: | 3-173 |
| Cow position: | chr13:20473649-20473820 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 3-176 |
| Cow position: | chr13:4588901-4588724 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 3-185 |
| Cow position: | chr13:51940769-51940583 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-195 |
| Cow position: | chr13:52459449-52459639 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 3-215 |
| Cow position: | chr13:20579942-20579731 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 3-231 |
| Cow position: | chr13:34261263-34261037 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 3-233 |
| Cow position: | chr13:24753915-24753694 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-161 |
| Cow position: | chr13:52055560-52055718 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-188 |
| Cow position: | chr13:18929560-18929377 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 4-188 |
| Cow position: | chr13:32283160-32282976 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 4-296 |
| Cow position: | chr13:28683396-28683110 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 168 |
| Conread position: | 9-198 |
| Cow position: | chr13:46516087-46515897 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 11-194 |
| Cow position: | chr13:6442087-6442262 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 19-163 |
| Cow position: | chr13:4404543-4404403 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 22-141 |
| Cow position: | chr13:15739702-15739587 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 22-154 |
| Cow position: | chr13:50582807-50582943 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 22-159 |
| Cow position: | chr13:51227725-51227865 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 22-163 |
| Cow position: | chr13:15997047-15996906 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-163 |
| Cow position: | chr13:37069358-37069217 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-172 |
| Cow position: | chr13:59461251-59461106 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 22-173 |
| Cow position: | chr13:7046883-7046731 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 22-173 |
| Cow position: | chr13:12875962-12876111 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 141, 96 |
| Conread position: | 22-173 |
| Cow position: | chr13:19393304-19393153 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 143, 72 |
| Conread position: | 22-177 |
| Cow position: | chr13:37503573-37503726 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 22-181 |
| Cow position: | chr13:6183407-6183567 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 22-181 |
| Cow position: | chr13:20231179-20231335 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 22-182 |
| Cow position: | chr13:18340546-18340385 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 22-182 |
| Cow position: | chr13:42640395-42640238 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 22-188 |
| Cow position: | chr13:27181054-27180889 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 22-195 |
| Cow position: | chr13:18491609-18491435 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 125 |
| Conread position: | 23-150 |
| Cow position: | chr13:33054361-33054488 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-162 |
| Cow position: | chr13:20520073-20519934 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-198 |
| Cow position: | chr13:2776300-2776125 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 142, 165 |
| Conread position: | 24-179 |
| Cow position: | chr13:56034849-56035004 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 24-185 |
| Cow position: | chr13:13775233-13775394 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 24-297 |
| Cow position: | chr13:51813925-51814172 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 25-167 |
| Cow position: | chr13:44003709-44003569 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 25-226 |
| Cow position: | chr13:19750725-19750524 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 26-163 |
| Cow position: | chr13:8699728-8699865 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-188 |
| Cow position: | chr13:18615393-18615230 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 136 |
| Conread position: | 26-192 |
| Cow position: | chr13:24110489-24110326 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 28-163 |
| Cow position: | chr13:16908224-16908089 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-180 |
| Cow position: | chr13:15143836-15143988 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 28-185 |
| Cow position: | chr13:23167094-23167254 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 28-297 |
| Cow position: | chr13:26369530-26369263 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 182, 76 |
| Conread position: | 29-163 |
| Cow position: | chr13:48554371-48554238 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 30-176 |
| Cow position: | chr13:36666269-36666414 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 30-188 |
| Cow position: | chr13:50768601-50768447 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 31-182 |
| Cow position: | chr13:17813475-17813325 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 43-165 |
| Cow position: | chr13:37980766-37980887 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 44-164 |
| Cow position: | chr13:43787846-43787966 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-164 |
| Cow position: | chr13:43839685-43839805 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-291 |
| Cow position: | chr13:9884526-9884291 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 5, 123 |
| Conread position: | 46-173 |
| Cow position: | chr13:30148574-30148702 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 51-163 |
| Cow position: | chr13:39398635-39398523 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-173 |
| Cow position: | chr13:11147036-11146918 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 60-187 |
| Cow position: | chr13:25520940-25521071 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 60-233 |
| Cow position: | chr13:9124899-9124729 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 64-195 |
| Cow position: | chr13:6975874-6976006 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 66-163 |
| Cow position: | chr13:28524348-28524445 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-189 |
| Cow position: | chr13:15808734-15808611 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 67-297 |
| Cow position: | chr13:32363212-32363446 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 160 |
| Conread position: | 68-188 |
| Cow position: | chr13:6113559-6113680 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 69-203 |
| Cow position: | chr13:48127074-48126939 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 70-188 |
| Cow position: | chr13:13796846-13796965 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 71-193 |
| Cow position: | chr13:51080406-51080284 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 89 |
Show alignments to all cow chromosomes.