Cow genome map

Conread name: Pig2-130H03

Conread position: 1-144
Cow position: chr14:22966844-22966704 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-151
Cow position: chr14:8786460-8786607 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 142, 21

Conread position: 1-156
Cow position: chr14:24236919-24236759 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 1-160
Cow position: chr14:48412788-48412950 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-162
Cow position: chr14:33309415-33309573 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 21

Conread position: 1-163
Cow position: chr14:1796282-1796122 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 65

Conread position: 1-163
Cow position: chr14:8541123-8541282 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 20

Conread position: 1-163
Cow position: chr14:11285668-11285509 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 55

Conread position: 1-163
Cow position: chr14:35503456-35503289 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-163
Cow position: chr14:37447377-37447534 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-163
Cow position: chr14:41190992-41191166 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 1-164
Cow position: chr14:48496055-48496216 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 60

Conread position: 1-165
Cow position: chr14:15039519-15039686 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 63

Conread position: 1-165
Cow position: chr14:45605183-45605025 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 58

Conread position: 1-172
Cow position: chr14:4877140-4877310 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 19

Conread position: 1-172
Cow position: chr14:14316974-14316806 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 79

Conread position: 1-172
Cow position: chr14:18763352-18763513 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 1-173
Cow position: chr14:12035499-12035329 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 77

Conread position: 1-176
Cow position: chr14:46998128-46997954 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 20

Conread position: 1-177
Cow position: chr14:19129601-19129420 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 1-177
Cow position: chr14:47672795-47672966 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-181
Cow position: chr14:49488053-49487871 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 88

Conread position: 1-185
Cow position: chr14:3943461-3943644 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 164, 23

Conread position: 1-185
Cow position: chr14:24981546-24981369 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 1-185
Cow position: chr14:40165515-40165334 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 1-185
Cow position: chr14:42437117-42436931 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 65

Conread position: 1-188
Cow position: chr14:7695359-7695171 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 86

Conread position: 1-188
Cow position: chr14:20016613-20016802 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 10

Conread position: 1-188
Cow position: chr14:26655042-26655229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 159

Conread position: 1-188
Cow position: chr14:28378452-28378264 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 28

Conread position: 1-188
Cow position: chr14:35381682-35381497 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 92

Conread position: 1-190
Cow position: chr14:38144017-38144204 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 1-191
Cow position: chr14:21933248-21933440 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 167

Conread position: 1-197
Cow position: chr14:1977979-1978178 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 19

Conread position: 1-297
Cow position: chr14:26097600-26097902 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 223

Conread position: 1-297
Cow position: chr14:44258018-44257740 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 169

Conread position: 2-151
Cow position: chr14:23478913-23478767 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 25

Conread position: 2-155
Cow position: chr14:25403843-25403998 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 2-160
Cow position: chr14:25399164-25399001 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 2-163
Cow position: chr14:36442926-36443089 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 2-177
Cow position: chr14:5630252-5630077 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 16

Conread position: 2-178
Cow position: chr14:45718175-45718348 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 27

Conread position: 2-185
Cow position: chr14:4991096-4990910 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 39

Conread position: 2-185
Cow position: chr14:50362886-50362700 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 3-152
Cow position: chr14:49767556-49767403 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 3-153
Cow position: chr14:11470059-11470209 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 70

Conread position: 3-164
Cow position: chr14:14622090-14622248 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 3-173
Cow position: chr14:7036265-7036439 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 3-173
Cow position: chr14:37883824-37883998 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 3-182
Cow position: chr14:42419184-42419366 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 159, 0

Conread position: 3-183
Cow position: chr14:41479572-41479754 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-185
Cow position: chr14:33830386-33830212 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 4-163
Cow position: chr14:23419886-23419725 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 4-184
Cow position: chr14:29965107-29964929 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 0

Conread position: 5-162
Cow position: chr14:20712602-20712757 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 69

Conread position: 9-177
Cow position: chr14:42247084-42246920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 10-163
Cow position: chr14:28924250-28924097 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 11-173
Cow position: chr14:12520222-12520382 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 15-163
Cow position: chr14:34448894-34449042 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 15-163
Cow position: chr14:44084413-44084560 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 15-186
Cow position: chr14:11056656-11056826 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 148, 70

Conread position: 15-188
Cow position: chr14:42423168-42422996 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 0

Conread position: 16-164
Cow position: chr14:18309230-18309379 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 21-128
Cow position: chr14:46062013-46061906 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-165
Cow position: chr14:26490671-26490817 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 21-165
Cow position: chr14:40208969-40208823 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 22-163
Cow position: chr14:4203028-4203169 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-163
Cow position: chr14:13385438-13385298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 10

Conread position: 22-163
Cow position: chr14:34399728-34399869 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-164
Cow position: chr14:23078722-23078864 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-164
Cow position: chr14:49941078-49940939 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 22-165
Cow position: chr14:17841222-17841364 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 22-165
Cow position: chr14:28115117-28115259 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 92, 103

Conread position: 22-165
Cow position: chr14:41252925-41253065 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 58

Conread position: 22-176
Cow position: chr14:23103931-23104082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 22-181
Cow position: chr14:10078338-10078179 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-188
Cow position: chr14:8923514-8923680 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 22-188
Cow position: chr14:40230570-40230729 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 22-189
Cow position: chr14:10609750-10609584 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 22-189
Cow position: chr14:32452319-32452151 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 22-195
Cow position: chr14:37902063-37901893 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 22-198
Cow position: chr14:33456973-33457148 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 164, 0

Conread position: 22-233
Cow position: chr14:4848417-4848207 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 33

Conread position: 23-177
Cow position: chr14:20481774-20481926 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 120, 76

Conread position: 23-180
Cow position: chr14:38168761-38168603 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 24-188
Cow position: chr14:28465152-28465310 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 24-297
Cow position: chr14:17238420-17238158 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 163, 89

Conread position: 25-163
Cow position: chr14:39037288-39037155 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 25-182
Cow position: chr14:20234126-20234284 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 0

Conread position: 25-188
Cow position: chr14:44713488-44713324 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 137

Conread position: 26-185
Cow position: chr14:5958921-5959082 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 26-188
Cow position: chr14:1708590-1708751 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 31-164
Cow position: chr14:19594076-19594209 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 37-163
Cow position: chr14:12121190-12121064 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 51-163
Cow position: chr14:26456414-26456302 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 55-163
Cow position: chr14:27303695-27303587 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 64-173
Cow position: chr14:16761582-16761693 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 64-297
Cow position: chr14:4209534-4209312 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 66-163
Cow position: chr14:37436684-37436781 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 66-185
Cow position: chr14:18270387-18270269 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 109

Conread position: 66-190
Cow position: chr14:8083224-8083102 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 66-190
Cow position: chr14:24785684-24785560 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 77, 83

Conread position: 69-188
Cow position: chr14:10920540-10920660 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 71-173
Cow position: chr14:30023176-30023279 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.