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Cow genome map

           
Conread name:
           
Pig2-130H03
        

               
Conread position:
               
1-135
               

               
Cow position:
               
chr16:50521428-50521562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr16:24672406-24672273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr16:18141378-18141237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr16:36121029-36120878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr16:38091274-38091118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr16:38119495-38119341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:10148231-10148393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:27160915-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:23871696-23871538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:29712372-29712531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr16:30186594-30186755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:4910576-4910411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:7152221-7152058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:8025899-8025741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:10032590-10032752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 154
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:10365869-10366038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:12523006-12523170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:13578911-13578747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:22380403-22380240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:38663759-38663597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:39165192-39165353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:42444108-42444269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:42734065-42733897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:44428830-44428997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:49169434-49169267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:51869591-51869753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:54226648-54226486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:4399687-4399850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:18354006-18353843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:42340146-42340311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:45299974-45299813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:56565548-56565711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr16:12361026-12360857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr16:14974584-14974428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:20871975-20872140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:8323032-8322860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:2223451-2223272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:15370633-15370811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:17745784-17745961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:53813703-53813528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr16:28396133-28395957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr16:33267667-33267844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr16:36286731-36286557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:20633928-20633748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:21317647-21317466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 165
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:42242165-42241989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
166, 115
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:46552753-46552922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:48545771-48545950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr16:1220232-1220049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:5725414-5725598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 180
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:33405545-33405359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:12501210-12501025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:56796715-56796530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:17135678-17135861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:22327450-22327647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:39683151-39682967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:53086386-53086203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:8065936-8065750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:17142889-17143073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:28444538-28444352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:32302054-32301868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:18048203-18048016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:23955880-23955691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:51112926-51112740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr16:47852641-47852448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr16:48086919-48086723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:37452665-37452465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:7583348-7583556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr16:18205911-18206141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr16:22984708-22984936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 62
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:33530363-33530618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:26030934-26030633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr16:7549917-7550199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
2-141
               

               
Cow position:
               
chr16:11775097-11774956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr16:8933472-8933314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr16:38243710-38243549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr16:50289101-50289264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chr16:30037040-30036876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr16:16548561-16548739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr16:56670970-56670784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr16:17626882-17627066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr16:18243695-18243872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr16:12633839-12634024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr16:22772929-22773159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:53509031-53508792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr16:6319152-6319417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 162
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr16:8441853-8441694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr16:46452793-46452630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr16:589757-589602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr16:48385448-48385279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr16:14242323-14242494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr16:56082410-56082228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr16:8193403-8193595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr16:7499013-7499288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr16:25380539-25380374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr16:4192470-4192320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr16:8438694-8438537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr16:22804644-22804463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr16:22842105-22841922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr16:43674829-43675127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
7-163
               

               
Cow position:
               
chr16:29677676-29677520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr16:13712974-13712788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr16:9578532-9578359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr16:15407597-15407414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
13-163
               

               
Cow position:
               
chr16:40745394-40745245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr16:11390322-11390153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
15-189
               

               
Cow position:
               
chr16:50282466-50282291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
16-143
               

               
Cow position:
               
chr16:53408963-53408835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr16:30027840-30027987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
16-297
               

               
Cow position:
               
chr16:39202107-39202374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
17-185
               

               
Cow position:
               
chr16:4736616-4736452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr16:12097611-12097778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr16:11390874-11391137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
22-162
               

               
Cow position:
               
chr16:56265475-56265613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
22-163
               

               
Cow position:
               
chr16:20647895-20648026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
22-163
               

               
Cow position:
               
chr16:44713507-44713366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
22-164
               

               
Cow position:
               
chr16:42433138-42432996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-164
               

               
Cow position:
               
chr16:56665548-56665690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-165
               

               
Cow position:
               
chr16:27723198-27723340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
22-173
               

               
Cow position:
               
chr16:20205434-20205586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
22-173
               

               
Cow position:
               
chr16:29159098-29159245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
22-173
               

               
Cow position:
               
chr16:30359090-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
22-176
               

               
Cow position:
               
chr16:34291318-34291164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-177
               

               
Cow position:
               
chr16:11359124-11359279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-177
               

               
Cow position:
               
chr16:49860205-49860364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 126
               

               
Conread position:
               
22-180
               

               
Cow position:
               
chr16:15254780-15254625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
22-183
               

               
Cow position:
               
chr16:14568516-14568353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr16:4938066-4938228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr16:9500495-9500659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr16:9560522-9560364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr16:15960317-15960153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
22-188
               

               
Cow position:
               
chr16:15023658-15023493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
22-197
               

               
Cow position:
               
chr16:17283419-17283592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr16:41530327-41530126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
190, 138
               

               
Conread position:
               
23-155
               

               
Cow position:
               
chr16:52275155-52275023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 126
               

               
Conread position:
               
23-162
               

               
Cow position:
               
chr16:16232027-16232169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
23-163
               

               
Cow position:
               
chr16:46548295-46548155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-173
               

               
Cow position:
               
chr16:48145425-48145278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
23-179
               

               
Cow position:
               
chr16:55968416-55968566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
23-184
               

               
Cow position:
               
chr16:29037893-29038048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr16:44138518-44138356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 66
               

               
Conread position:
               
24-163
               

               
Cow position:
               
chr16:34753985-34753846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-165
               

               
Cow position:
               
chr16:13531788-13531923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-182
               

               
Cow position:
               
chr16:45122010-45122169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr16:40446237-40446403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr16:45943799-45943627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
25-179
               

               
Cow position:
               
chr16:22329137-22329292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
25-188
               

               
Cow position:
               
chr16:50442524-50442687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-162
               

               
Cow position:
               
chr16:7496235-7496368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
28-169
               

               
Cow position:
               
chr16:51697062-51697206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
28-173
               

               
Cow position:
               
chr16:8522407-8522265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
28-182
               

               
Cow position:
               
chr16:9958808-9958962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
28-188
               

               
Cow position:
               
chr16:7812669-7812828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
30-185
               

               
Cow position:
               
chr16:48448704-48448856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
30-188
               

               
Cow position:
               
chr16:13996214-13996058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr16:9596351-9596553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 181
               

               
Conread position:
               
42-188
               

               
Cow position:
               
chr16:45348374-45348525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
43-163
               

               
Cow position:
               
chr16:34412803-34412922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
46-188
               

               
Cow position:
               
chr16:7928388-7928247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
47-184
               

               
Cow position:
               
chr16:45193811-45193676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
55-185
               

               
Cow position:
               
chr16:8469683-8469808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
61-163
               

               
Cow position:
               
chr16:33290396-33290498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-163
               

               
Cow position:
               
chr16:44568897-44568995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-190
               

               
Cow position:
               
chr16:43866832-43866709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
66-163
               

               
Cow position:
               
chr16:28199046-28199142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
66-182
               

               
Cow position:
               
chr16:52803939-52803822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
66-206
               

               
Cow position:
               
chr16:33752750-33752891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
67-185
               

               
Cow position:
               
chr16:27032594-27032711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
67-188
               

               
Cow position:
               
chr16:21442593-21442473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
68-162
               

               
Cow position:
               
chr16:38355410-38355316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-169
               

               
Cow position:
               
chr16:5243105-5243207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
68-177
               

               
Cow position:
               
chr16:22927541-22927650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-236
               

               
Cow position:
               
chr16:17979808-17979972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
74-181
               

               
Cow position:
               
chr16:27759581-27759472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
75-184
               

               
Cow position:
               
chr16:11654068-11654176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
75-233
               

               
Cow position:
               
chr16:30646538-30646695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 143
               
Show alignments to all cow chromosomes.