Cow genome map

Conread name: Pig2-130H03

Conread position: 1-141
Cow position: chr23:4562838-4562979 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 1-141
Cow position: chr23:28053227-28053365 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 5

Conread position: 1-141
Cow position: chr23:32309637-32309779 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-152
Cow position: chr23:36309373-36309525 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 57

Conread position: 1-153
Cow position: chr23:24984215-24984064 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 17

Conread position: 1-162
Cow position: chr23:12091406-12091242 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 14

Conread position: 1-163
Cow position: chr23:1885219-1885057 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr23:16700086-16699926 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr23:15287185-15287022 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 55

Conread position: 1-168
Cow position: chr23:35247318-35247488 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 1-169
Cow position: chr23:27544781-27544950 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 157, 0

Conread position: 1-173
Cow position: chr23:283444-283267 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-173
Cow position: chr23:6995030-6994856 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 149

Conread position: 1-173
Cow position: chr23:15743043-15743218 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 88

Conread position: 1-173
Cow position: chr23:16582956-16582783 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 164, 0

Conread position: 1-173
Cow position: chr23:22804678-22804851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 158, 0

Conread position: 1-176
Cow position: chr23:13520403-13520580 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 14

Conread position: 1-177
Cow position: chr23:18296761-18296936 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 55

Conread position: 1-177
Cow position: chr23:18402336-18402162 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 7

Conread position: 1-177
Cow position: chr23:34356596-34356771 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 14

Conread position: 1-178
Cow position: chr23:3191174-3190995 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 162

Conread position: 1-181
Cow position: chr23:30950909-30951088 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 17

Conread position: 1-181
Cow position: chr23:36172474-36172657 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 16

Conread position: 1-185
Cow position: chr23:4104356-4104534 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 164, 21

Conread position: 1-185
Cow position: chr23:38208678-38208865 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 110

Conread position: 1-185
Cow position: chr23:39780707-39780891 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 160

Conread position: 1-188
Cow position: chr23:5437045-5436864 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-188
Cow position: chr23:33711714-33711899 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 0

Conread position: 1-189
Cow position: chr23:38455229-38455036 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 189

Conread position: 1-190
Cow position: chr23:14651752-14651569 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 81

Conread position: 1-195
Cow position: chr23:10416468-10416276 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 59

Conread position: 1-197
Cow position: chr23:18416094-18415906 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 192, 9

Conread position: 1-197
Cow position: chr23:21309460-21309262 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 138

Conread position: 1-297
Cow position: chr23:14739396-14739701 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 21

Conread position: 2-122
Cow position: chr23:1921272-1921152 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-163
Cow position: chr23:306472-306638 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 2-163
Cow position: chr23:307405-307571 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 2-163
Cow position: chr23:18822943-18823105 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 2-165
Cow position: chr23:29069489-29069323 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 2-173
Cow position: chr23:1701124-1701298 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 17

Conread position: 2-181
Cow position: chr23:1767783-1767965 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 2-185
Cow position: chr23:187131-187315 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 160

Conread position: 2-185
Cow position: chr23:41472572-41472759 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 112

Conread position: 2-188
Cow position: chr23:4968567-4968390 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 3-163
Cow position: chr23:38845560-38845715 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 17

Conread position: 3-164
Cow position: chr23:6035390-6035548 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 79

Conread position: 3-176
Cow position: chr23:40648779-40648603 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 3-184
Cow position: chr23:20388696-20388515 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 141

Conread position: 3-188
Cow position: chr23:37976-38167 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 163

Conread position: 4-141
Cow position: chr23:3262540-3262404 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 4-195
Cow position: chr23:41348672-41348476 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 5-219
Cow position: chr23:39793634-39793845 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 182, 46

Conread position: 6-188
Cow position: chr23:29479849-29480026 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 15

Conread position: 8-160
Cow position: chr23:30655852-30655701 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 75

Conread position: 8-185
Cow position: chr23:26283684-26283857 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 110

Conread position: 8-202
Cow position: chr23:13945999-13946187 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 12-172
Cow position: chr23:16447725-16447563 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 71

Conread position: 15-184
Cow position: chr23:1936675-1936502 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 144, 0

Conread position: 17-173
Cow position: chr23:37065819-37065974 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 130

Conread position: 22-162
Cow position: chr23:23409708-23409847 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 73

Conread position: 22-163
Cow position: chr23:33622175-33622034 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 22-164
Cow position: chr23:4726769-4726908 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 55

Conread position: 22-172
Cow position: chr23:23904353-23904203 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 39

Conread position: 22-179
Cow position: chr23:13137961-13137803 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 143, 0

Conread position: 22-185
Cow position: chr23:11081231-11081394 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 79

Conread position: 22-188
Cow position: chr23:8698394-8698562 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 23-163
Cow position: chr23:4864407-4864547 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 23-173
Cow position: chr23:2501878-2501729 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 143, 0

Conread position: 23-181
Cow position: chr23:7574645-7574490 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 142, 33

Conread position: 26-188
Cow position: chr23:35929929-35930087 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 16

Conread position: 27-163
Cow position: chr23:2470982-2471118 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-185
Cow position: chr23:21438473-21438636 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 28-162
Cow position: chr23:14569520-14569386 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 28-182
Cow position: chr23:3835614-3835460 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 63

Conread position: 31-185
Cow position: chr23:4327717-4327563 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 31-185
Cow position: chr23:27790002-27790154 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 32-173
Cow position: chr23:5686637-5686495 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 40-163
Cow position: chr23:32621276-32621401 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 40-184
Cow position: chr23:24779550-24779411 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 42-188
Cow position: chr23:12405825-12405683 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 59-162
Cow position: chr23:26591899-26591797 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 61-161
Cow position: chr23:580807-580707 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 63-163
Cow position: chr23:35254149-35254050 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 64-173
Cow position: chr23:3979746-3979637 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 96

Conread position: 65-180
Cow position: chr23:5514542-5514658 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 66-185
Cow position: chr23:1480658-1480778 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 66-297
Cow position: chr23:31299193-31299433 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 177

Conread position: 67-163
Cow position: chr23:10595441-10595345 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 67-230
Cow position: chr23:18489676-18489838 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 27

Conread position: 68-176
Cow position: chr23:38993069-38992962 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 75-297
Cow position: chr23:5387063-5386841 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 36

Show alignments to all cow chromosomes.