Cow genome map

Conread name: Pig2-130H03

Conread position: 1-163
Cow position: chr25:13272515-13272680 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-163
Cow position: chr25:13325527-13325691 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1-163
Cow position: chr25:17119692-17119853 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 52

Conread position: 1-163
Cow position: chr25:18905834-18905996 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr25:22730777-22730939 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 111

Conread position: 1-163
Cow position: chr25:26051849-26052013 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 149

Conread position: 1-163
Cow position: chr25:33555556-33555716 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 22

Conread position: 1-164
Cow position: chr25:14513060-14513227 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 53

Conread position: 1-164
Cow position: chr25:22751060-22750895 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 14

Conread position: 1-165
Cow position: chr25:24862824-24862988 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr25:6687895-6688059 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 62

Conread position: 1-173
Cow position: chr25:1763038-1763209 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 60

Conread position: 1-173
Cow position: chr25:20008082-20008255 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 19

Conread position: 1-176
Cow position: chr25:7726613-7726785 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 1-178
Cow position: chr25:16867188-16867368 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 25

Conread position: 1-178
Cow position: chr25:24651502-24651331 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-181
Cow position: chr25:30816834-30817019 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 1-182
Cow position: chr25:20069671-20069851 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 21

Conread position: 1-185
Cow position: chr25:1824149-1823962 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1-185
Cow position: chr25:11585465-11585652 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 62

Conread position: 1-188
Cow position: chr25:433101-432913 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 50

Conread position: 1-191
Cow position: chr25:30619012-30619204 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 86

Conread position: 1-215
Cow position: chr25:17403432-17403644 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 41

Conread position: 2-154
Cow position: chr25:16064839-16064994 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 2-172
Cow position: chr25:23245053-23244882 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 2-173
Cow position: chr25:26700980-26701147 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 82

Conread position: 2-174
Cow position: chr25:23817894-23817718 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 2-178
Cow position: chr25:5920033-5920206 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 20

Conread position: 2-181
Cow position: chr25:10504389-10504211 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 80

Conread position: 2-185
Cow position: chr25:21245654-21245472 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 164, 0

Conread position: 2-197
Cow position: chr25:17658557-17658757 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 3-141
Cow position: chr25:9349330-9349195 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 48

Conread position: 3-163
Cow position: chr25:11956755-11956915 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-163
Cow position: chr25:17704694-17704855 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 3-165
Cow position: chr25:10643359-10643196 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 3-176
Cow position: chr25:18988340-18988506 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 116

Conread position: 3-188
Cow position: chr25:1838188-1838375 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 161

Conread position: 3-198
Cow position: chr25:35052671-35052476 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 12

Conread position: 3-297
Cow position: chr25:21894936-21894646 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 101

Conread position: 4-163
Cow position: chr25:16921845-16921685 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 5-161
Cow position: chr25:26087470-26087630 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 88

Conread position: 5-176
Cow position: chr25:18760755-18760585 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 5-176
Cow position: chr25:35109313-35109144 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 160, 15

Conread position: 10-185
Cow position: chr25:40904872-40904696 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 11-188
Cow position: chr25:9002631-9002806 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 17-168
Cow position: chr25:26072592-26072445 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 63

Conread position: 17-297
Cow position: chr25:34242140-34241859 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 193

Conread position: 18-163
Cow position: chr25:33457697-33457843 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 130

Conread position: 19-173
Cow position: chr25:5474263-5474108 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 0

Conread position: 22-163
Cow position: chr25:61620-61761 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 121, 125

Conread position: 22-163
Cow position: chr25:10218079-10217938 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-163
Cow position: chr25:18564457-18564597 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 22-163
Cow position: chr25:36840366-36840507 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 94

Conread position: 22-165
Cow position: chr25:9990140-9989998 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 22-177
Cow position: chr25:9939286-9939135 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 147, 63

Conread position: 22-177
Cow position: chr25:26160935-26161093 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 141

Conread position: 22-183
Cow position: chr25:6474117-6473955 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 22-185
Cow position: chr25:20862428-20862587 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 91

Conread position: 22-185
Cow position: chr25:31762638-31762475 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 22-185
Cow position: chr25:36872328-36872492 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 22-227
Cow position: chr25:38421636-38421842 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 166

Conread position: 23-159
Cow position: chr25:30656675-30656542 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 24-166
Cow position: chr25:4221631-4221490 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 24-188
Cow position: chr25:12097812-12097969 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 25-163
Cow position: chr25:21266964-21267098 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 94

Conread position: 25-164
Cow position: chr25:13503406-13503546 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 26-219
Cow position: chr25:9615811-9616011 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 28-182
Cow position: chr25:22520313-22520468 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 31-163
Cow position: chr25:15218115-15218243 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 36-162
Cow position: chr25:7380855-7380729 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 37-163
Cow position: chr25:10791829-10791704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 40-182
Cow position: chr25:36873068-36872925 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 41-188
Cow position: chr25:31514170-31514316 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 55-177
Cow position: chr25:18646588-18646711 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 63-173
Cow position: chr25:7330613-7330726 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 66-161
Cow position: chr25:7403327-7403232 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 66-163
Cow position: chr25:26156763-26156667 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 66-173
Cow position: chr25:36369833-36369940 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 52

Conread position: 66-173
Cow position: chr25:36375524-36375631 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 52

Conread position: 67-163
Cow position: chr25:3983301-3983395 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 67-195
Cow position: chr25:33100590-33100719 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 86-297
Cow position: chr25:31344061-31343847 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 167

Show alignments to all cow chromosomes.