Cow genome map
| Conread name: | Pig2-130H03 |
| Conread position: | 1-127 |
| Cow position: | chr5:31918621-31918745 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:32696847-32696706 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 1-141 |
| Cow position: | chr5:46672181-46672322 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-154 |
| Cow position: | chr5:6444175-6444025 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-161 |
| Cow position: | chr5:2309581-2309421 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 1-161 |
| Cow position: | chr5:53946872-53947034 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-162 |
| Cow position: | chr5:42845621-42845453 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-162 |
| Cow position: | chr5:55795989-55795828 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 7 |
| Conread position: | 1-163 |
| Cow position: | chr5:18289106-18289261 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 1-163 |
| Cow position: | chr5:35459320-35459154 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:43992299-43992463 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:49501849-49501685 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:54767933-54767770 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 1-163 |
| Cow position: | chr5:63987473-63987307 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 1-164 |
| Cow position: | chr5:59626998-59626832 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 1-165 |
| Cow position: | chr5:26262700-26262538 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 1-169 |
| Cow position: | chr5:72564738-72564910 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-172 |
| Cow position: | chr5:13717591-13717424 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:21039999-21039833 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 1-173 |
| Cow position: | chr5:39258488-39258654 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:42064179-42064355 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:52165202-52165029 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-173 |
| Cow position: | chr5:54350387-54350211 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:30805142-30805318 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 164, 82 |
| Conread position: | 1-177 |
| Cow position: | chr5:34528529-34528701 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 1-177 |
| Cow position: | chr5:53855674-53855860 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:57230364-57230185 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:58446782-58446962 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-181 |
| Cow position: | chr5:45273524-45273345 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 177, 140 |
| Conread position: | 1-182 |
| Cow position: | chr5:458467-458647 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 1-182 |
| Cow position: | chr5:60210168-60209990 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 155 |
| Conread position: | 1-185 |
| Cow position: | chr5:30247544-30247367 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:41981346-41981530 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 1-185 |
| Cow position: | chr5:66972404-66972589 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 1-188 |
| Cow position: | chr5:7057424-7057236 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 166, 105 |
| Conread position: | 1-188 |
| Cow position: | chr5:14904095-14903904 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-188 |
| Cow position: | chr5:44796756-44796574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 1-195 |
| Cow position: | chr5:50101402-50101202 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-196 |
| Cow position: | chr5:55019268-55019466 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-220 |
| Cow position: | chr5:51935168-51935385 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 1-237 |
| Cow position: | chr5:45420158-45419922 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 1-281 |
| Cow position: | chr5:49685294-49685018 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 109 |
| Conread position: | 1-295 |
| Cow position: | chr5:2851564-2851862 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 1-297 |
| Cow position: | chr5:30949941-30949642 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 1-297 |
| Cow position: | chr5:41165062-41165353 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 177 |
| Conread position: | 1-297 |
| Cow position: | chr5:58856080-58856362 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 188, 96 |
| Conread position: | 1-297 |
| Cow position: | chr5:59115363-59115646 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-148 |
| Cow position: | chr5:24349085-24349231 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-162 |
| Cow position: | chr5:47316994-47316835 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 157, 12 |
| Conread position: | 2-163 |
| Cow position: | chr5:50575762-50575922 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 2-165 |
| Cow position: | chr5:46322821-46322662 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 2-173 |
| Cow position: | chr5:57419816-57419644 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 2-177 |
| Cow position: | chr5:9369290-9369117 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 162, 19 |
| Conread position: | 2-181 |
| Cow position: | chr5:54311312-54311494 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-182 |
| Cow position: | chr5:23678725-23678546 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 2-185 |
| Cow position: | chr5:9090044-9089868 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-185 |
| Cow position: | chr5:26477044-26476856 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 2-188 |
| Cow position: | chr5:11668207-11668024 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 2-188 |
| Cow position: | chr5:50723025-50723209 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-297 |
| Cow position: | chr5:4710170-4709881 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 165, 14 |
| Conread position: | 3-153 |
| Cow position: | chr5:453537-453686 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-160 |
| Cow position: | chr5:62142652-62142812 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-163 |
| Cow position: | chr5:4280426-4280587 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 3-163 |
| Cow position: | chr5:17999514-17999357 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 3-163 |
| Cow position: | chr5:54086521-54086677 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-163 |
| Cow position: | chr5:64140511-64140677 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-164 |
| Cow position: | chr5:28224432-28224592 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 3-185 |
| Cow position: | chr5:34347751-34347573 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 3-188 |
| Cow position: | chr5:11769247-11769433 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 3-207 |
| Cow position: | chr5:12761140-12760938 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 4-164 |
| Cow position: | chr5:7723644-7723805 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-155 |
| Cow position: | chr5:45574385-45574234 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 5-188 |
| Cow position: | chr5:28230143-28230329 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 7-154 |
| Cow position: | chr5:30561915-30562062 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-185 |
| Cow position: | chr5:43844684-43844503 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 151 |
| Conread position: | 7-190 |
| Cow position: | chr5:16939610-16939429 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-176 |
| Cow position: | chr5:25597820-25597984 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-157 |
| Cow position: | chr5:48867477-48867331 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-181 |
| Cow position: | chr5:29771518-29771686 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 17-177 |
| Cow position: | chr5:39447542-39447376 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 17-297 |
| Cow position: | chr5:35513207-35513481 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 17-297 |
| Cow position: | chr5:59873091-59872822 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 19-185 |
| Cow position: | chr5:6033431-6033597 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 21-179 |
| Cow position: | chr5:5760316-5760162 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 21-188 |
| Cow position: | chr5:15364266-15364432 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 22-160 |
| Cow position: | chr5:6528681-6528821 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 22-163 |
| Cow position: | chr5:4226345-4226485 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 22-163 |
| Cow position: | chr5:27293886-27293745 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-167 |
| Cow position: | chr5:65679972-65679830 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 22-176 |
| Cow position: | chr5:20843397-20843243 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 97, 133 |
| Conread position: | 22-176 |
| Cow position: | chr5:67634519-67634361 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 22-177 |
| Cow position: | chr5:20995094-20994932 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 22-182 |
| Cow position: | chr5:58519418-58519255 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 22-184 |
| Cow position: | chr5:53710691-53710528 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 22-185 |
| Cow position: | chr5:20128050-20128214 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 22-185 |
| Cow position: | chr5:26097291-26097450 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 22-188 |
| Cow position: | chr5:2469209-2469049 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 22-188 |
| Cow position: | chr5:35247112-35246947 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 22-188 |
| Cow position: | chr5:39937114-39937278 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 22-188 |
| Cow position: | chr5:54750813-54750969 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 22-188 |
| Cow position: | chr5:55965896-55965731 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 22-228 |
| Cow position: | chr5:55129341-55129549 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 23-163 |
| Cow position: | chr5:65552709-65552578 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 23-173 |
| Cow position: | chr5:33560735-33560584 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 23-176 |
| Cow position: | chr5:24946239-24946393 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 23-188 |
| Cow position: | chr5:11289394-11289227 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 146 |
| Conread position: | 23-188 |
| Cow position: | chr5:36868736-36868898 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 23-271 |
| Cow position: | chr5:52852970-52853216 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 188 |
| Conread position: | 24-125 |
| Cow position: | chr5:14742214-14742315 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-175 |
| Cow position: | chr5:5257289-5257133 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 24-190 |
| Cow position: | chr5:44163369-44163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 25-154 |
| Cow position: | chr5:48918811-48918938 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 25-177 |
| Cow position: | chr5:44810238-44810085 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 26-163 |
| Cow position: | chr5:11562721-11562583 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 26-177 |
| Cow position: | chr5:59627102-59627254 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 26-184 |
| Cow position: | chr5:12299913-12300066 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 28-163 |
| Cow position: | chr5:43858415-43858281 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 31-163 |
| Cow position: | chr5:60948140-60948271 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 32-179 |
| Cow position: | chr5:20211970-20212119 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 33-182 |
| Cow position: | chr5:44196920-44196771 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-188 |
| Cow position: | chr5:52001607-52001460 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 41-297 |
| Cow position: | chr5:49260019-49259774 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 45-163 |
| Cow position: | chr5:51233998-51233880 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-163 |
| Cow position: | chr5:16185405-16185517 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-177 |
| Cow position: | chr5:22102585-22102711 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 119 |
| Conread position: | 60-177 |
| Cow position: | chr5:44901545-44901664 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 60-188 |
| Cow position: | chr5:43839964-43839836 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 66-161 |
| Cow position: | chr5:62011725-62011820 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-163 |
| Cow position: | chr5:20882582-20882485 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-164 |
| Cow position: | chr5:51490560-51490462 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-185 |
| Cow position: | chr5:56433923-56434043 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 66-188 |
| Cow position: | chr5:20812588-20812710 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 52 |
| Conread position: | 66-188 |
| Cow position: | chr5:24915485-24915364 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 66-188 |
| Cow position: | chr5:49821470-49821592 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-188 |
| Cow position: | chr5:53980712-53980591 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 66-195 |
| Cow position: | chr5:16668739-16668869 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 66-297 |
| Cow position: | chr5:37377894-37378117 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 67-170 |
| Cow position: | chr5:22387016-22386913 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-195 |
| Cow position: | chr5:29979915-29979788 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 73-163 |
| Cow position: | chr5:4336341-4336431 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.