Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 250-614 |
| Cow position: | chr10:53319644-53320006 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 264-615 |
| Cow position: | chr10:20538913-20538561 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 268-609 |
| Cow position: | chr10:41635988-41635642 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 272 |
| Conread position: | 287-429 |
| Cow position: | chr10:24756759-24756619 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 288-402 |
| Cow position: | chr10:55099341-55099454 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 288-486 |
| Cow position: | chr10:25004495-25004306 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 168, 61 |
| Conread position: | 288-526 |
| Cow position: | chr10:28031344-28031590 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-530 |
| Cow position: | chr10:51557981-51557731 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 288-546 |
| Cow position: | chr10:7279517-7279779 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 288-596 |
| Cow position: | chr10:63625643-63625328 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-599 |
| Cow position: | chr10:31540944-31540628 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 288-603 |
| Cow position: | chr10:50017780-50018100 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 288-611 |
| Cow position: | chr10:1380083-1379751 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 288-613 |
| Cow position: | chr10:24309613-24309946 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 288-615 |
| Cow position: | chr10:8292710-8292377 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:12101810-12102138 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 288-615 |
| Cow position: | chr10:14333260-14333595 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:19142023-19142364 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 140 |
| Conread position: | 288-615 |
| Cow position: | chr10:19513813-19513479 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:20268111-20268448 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:21426718-21427055 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:21516428-21516764 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 288-615 |
| Cow position: | chr10:25255348-25255020 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 288-615 |
| Cow position: | chr10:29107197-29107528 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 288-615 |
| Cow position: | chr10:29629688-29630013 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:29844096-29844424 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:32703347-32703009 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 80 |
| Conread position: | 288-615 |
| Cow position: | chr10:38842748-38842410 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:38850838-38850508 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:41149158-41149475 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:57987118-57987453 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr10:62406189-62406522 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 291-431 |
| Cow position: | chr10:32580816-32580674 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-466 |
| Cow position: | chr10:8681202-8681024 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-480 |
| Cow position: | chr10:14806515-14806324 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-503 |
| Cow position: | chr10:32008656-32008437 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-579 |
| Cow position: | chr10:10584708-10584418 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 66 |
| Conread position: | 291-593 |
| Cow position: | chr10:31856061-31855748 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-594 |
| Cow position: | chr10:47909201-47908890 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-613 |
| Cow position: | chr10:41569683-41569357 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:1663383-1663714 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:6287328-6286993 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:7895903-7896235 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:13851725-13851390 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 65 |
| Conread position: | 291-615 |
| Cow position: | chr10:17958663-17958328 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:19842251-19841933 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:21450620-21450948 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:22344056-22343716 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:23848544-23848209 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:25650839-25651166 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:30719271-30718939 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:32086268-32085933 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:32364521-32364187 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:33868605-33868932 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:39210342-39210007 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:39776425-39776751 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:40348075-40348408 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:41879518-41879184 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:44706129-44706458 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:48374865-48375200 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:51950518-51950850 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:52827033-52827365 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:53172739-53173074 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr10:57554757-57555092 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 293-526 |
| Cow position: | chr10:24297928-24298155 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 163, 64 |
| Conread position: | 294-599 |
| Cow position: | chr10:21897074-21897384 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 63 |
| Conread position: | 294-614 |
| Cow position: | chr10:48745236-48745566 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 294-615 |
| Cow position: | chr10:14865431-14865112 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 294-615 |
| Cow position: | chr10:36467281-36467613 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 294-615 |
| Cow position: | chr10:54929396-54929719 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 297-614 |
| Cow position: | chr10:40149587-40149908 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 297-615 |
| Cow position: | chr10:25340728-25340402 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 298-613 |
| Cow position: | chr10:278778-279111 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr10:5867989-5868308 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr10:37772464-37772139 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr10:39038486-39038809 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-503 |
| Cow position: | chr10:21738155-21738367 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 299-503 |
| Cow position: | chr10:47156290-47156078 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 105, 61 |
| Conread position: | 299-612 |
| Cow position: | chr10:15831501-15831819 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 299-615 |
| Cow position: | chr10:46762772-46762455 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 302-508 |
| Cow position: | chr10:36513960-36513752 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 157, 54 |
Show alignments to all cow chromosomes.