Cow genome map

Conread name: Pig2-137D18

Conread position: 251-603
Cow position: chr11:12950890-12951252 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 260-615
Cow position: chr11:8444870-8445238 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 264-590
Cow position: chr11:3682613-3682939 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 264-599
Cow position: chr11:9080300-9080645 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 94

Conread position: 264-615
Cow position: chr11:75403237-75403589 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 271-613
Cow position: chr11:3227977-3227621 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 90

Conread position: 271-615
Cow position: chr11:44232685-44232344 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 90

Conread position: 285-614
Cow position: chr11:29666365-29666701 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 72

Conread position: 287-580
Cow position: chr11:37280461-37280761 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 288-405
Cow position: chr11:7926866-7926982 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 288-438
Cow position: chr11:58138931-58138779 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 116, 69

Conread position: 288-458
Cow position: chr11:15720508-15720674 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 69

Conread position: 288-458
Cow position: chr11:34022198-34022041 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 288-462
Cow position: chr11:25395392-25395216 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 115, 20

Conread position: 288-573
Cow position: chr11:39805935-39805645 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 47

Conread position: 288-584
Cow position: chr11:25183258-25182963 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 58

Conread position: 288-589
Cow position: chr11:21471018-21470719 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 69

Conread position: 288-599
Cow position: chr11:87137995-87138316 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 69

Conread position: 288-603
Cow position: chr11:7228473-7228150 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-610
Cow position: chr11:15127037-15126705 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-611
Cow position: chr11:32078560-32078894 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-612
Cow position: chr11:37070128-37070449 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 70

Conread position: 288-613
Cow position: chr11:26549719-26549386 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:19100262-19100599 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 288-615
Cow position: chr11:22934370-22934706 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:23882230-23881892 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:24395535-24395201 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:26122698-26123032 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:31928392-31928061 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 288-615
Cow position: chr11:33602410-33602746 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:40327665-40328000 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr11:49237734-49238073 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 58

Conread position: 288-615
Cow position: chr11:59370485-59370162 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 69

Conread position: 288-615
Cow position: chr11:66731376-66731043 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 289-615
Cow position: chr11:52421688-52421355 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 290-615
Cow position: chr11:30121428-30121751 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 67

Conread position: 291-429
Cow position: chr11:9431433-9431295 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 70

Conread position: 291-458
Cow position: chr11:35143102-35143277 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 66

Conread position: 291-465
Cow position: chr11:77235837-77235664 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 66

Conread position: 291-466
Cow position: chr11:10699530-10699705 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 169, 66

Conread position: 291-466
Cow position: chr11:49012844-49013022 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 66

Conread position: 291-483
Cow position: chr11:50835396-50835596 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 113, 66

Conread position: 291-487
Cow position: chr11:25098953-25099157 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 66

Conread position: 291-502
Cow position: chr11:41422689-41422908 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-503
Cow position: chr11:39585505-39585725 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 113, 66

Conread position: 291-508
Cow position: chr11:35862411-35862636 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 66

Conread position: 291-537
Cow position: chr11:47973635-47973889 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 65

Conread position: 291-554
Cow position: chr11:7121747-7122017 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-579
Cow position: chr11:72312673-72312377 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 66

Conread position: 291-593
Cow position: chr11:44515732-44516043 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-599
Cow position: chr11:49172284-49172600 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 58

Conread position: 291-603
Cow position: chr11:12096011-12095688 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 64

Conread position: 291-606
Cow position: chr11:41744777-41744451 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-611
Cow position: chr11:76371838-76372172 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-614
Cow position: chr11:26068843-26069160 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 291-614
Cow position: chr11:78791848-78792182 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:2350169-2349834 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:4033180-4033510 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 70

Conread position: 291-615
Cow position: chr11:8265745-8265404 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 137

Conread position: 291-615
Cow position: chr11:9154971-9155293 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 66

Conread position: 291-615
Cow position: chr11:9732458-9732790 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 70

Conread position: 291-615
Cow position: chr11:10958037-10957710 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:15987473-15987138 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:17105465-17105797 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:19061858-19062185 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:20732006-20732337 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:24292673-24292341 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 65

Conread position: 291-615
Cow position: chr11:28227561-28227888 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:30201473-30201803 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:30254446-30254116 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 291-615
Cow position: chr11:32478596-32478922 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:38575266-38575601 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:52845761-52845422 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:63391259-63391594 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:67446023-67446358 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:67452871-67452536 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:73135521-73135188 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:75392469-75392134 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr11:84966334-84965999 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 294-613
Cow position: chr11:7118627-7118301 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 294-615
Cow position: chr11:9249010-9249342 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 63

Conread position: 294-615
Cow position: chr11:73467201-73467544 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 296-612
Cow position: chr11:15994377-15994058 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 54

Conread position: 297-613
Cow position: chr11:10092885-10092562 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 60

Conread position: 298-588
Cow position: chr11:67296798-67297097 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 70

Conread position: 298-594
Cow position: chr11:4025287-4025589 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 59

Conread position: 298-599
Cow position: chr11:64385130-64384822 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 59

Conread position: 298-615
Cow position: chr11:3495194-3494866 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr11:10850330-10850005 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr11:27725691-27726011 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 59

Conread position: 298-615
Cow position: chr11:40773820-40774130 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 51

Conread position: 298-615
Cow position: chr11:44154878-44155200 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr11:44254286-44253960 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 59

Conread position: 299-615
Cow position: chr11:28124723-28124382 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 306-561
Cow position: chr11:82347208-82347462 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 51

Show alignments to all cow chromosomes.