Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 247-615 |
| Cow position: | chr13:19044229-19044603 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 5 |
| Conread position: | 267-614 |
| Cow position: | chr13:47368482-47368133 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 285-611 |
| Cow position: | chr13:30470077-30470402 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 287-580 |
| Cow position: | chr13:21879508-21879815 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 287-615 |
| Cow position: | chr13:41338363-41338689 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 73 |
| Conread position: | 288-450 |
| Cow position: | chr13:1883189-1883353 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-489 |
| Cow position: | chr13:30795399-30795603 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 288-508 |
| Cow position: | chr13:43591570-43591348 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-611 |
| Cow position: | chr13:33334053-33334378 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-612 |
| Cow position: | chr13:22275106-22274772 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 288-613 |
| Cow position: | chr13:6441156-6440832 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 169, 69 |
| Conread position: | 288-613 |
| Cow position: | chr13:50191330-50191667 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:3313922-3313596 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:13902156-13901824 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:15279495-15279833 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:15559630-15559294 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:15922163-15922498 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:19290912-19291250 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 288-615 |
| Cow position: | chr13:30652990-30653325 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 288-615 |
| Cow position: | chr13:31728603-31728939 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:32734892-32735234 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:34040046-34040386 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:34509515-34509850 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr13:36347824-36348156 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-615 |
| Cow position: | chr13:44324662-44325002 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 289-615 |
| Cow position: | chr13:30240844-30240515 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 290-519 |
| Cow position: | chr13:5516034-5516268 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 291-417 |
| Cow position: | chr13:36671947-36671819 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-442 |
| Cow position: | chr13:31731271-31731424 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-449 |
| Cow position: | chr13:22614930-22614770 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-452 |
| Cow position: | chr13:18122579-18122742 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-457 |
| Cow position: | chr13:32080156-32079988 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-459 |
| Cow position: | chr13:19230419-19230586 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-466 |
| Cow position: | chr13:51465907-51466082 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-503 |
| Cow position: | chr13:3555703-3555483 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-527 |
| Cow position: | chr13:28527615-28527857 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-557 |
| Cow position: | chr13:5499695-5499960 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-557 |
| Cow position: | chr13:11738048-11737774 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-560 |
| Cow position: | chr13:3692655-3692932 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-579 |
| Cow position: | chr13:5230653-5230945 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 291-599 |
| Cow position: | chr13:15447198-15447502 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 291-603 |
| Cow position: | chr13:20572804-20573120 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-614 |
| Cow position: | chr13:11796411-11796747 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 176 |
| Conread position: | 291-615 |
| Cow position: | chr13:680067-679737 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:3022988-3023315 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:11389499-11389164 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:17310711-17310376 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:19637438-19637108 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:23455731-23455396 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:24932501-24932837 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:49975967-49975636 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 291-615 |
| Cow position: | chr13:60425295-60424955 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:60647289-60647623 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr13:61953530-61953200 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 294-458 |
| Cow position: | chr13:34763685-34763851 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 63 |
| Conread position: | 294-461 |
| Cow position: | chr13:33632834-33632989 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 294-603 |
| Cow position: | chr13:60698510-60698824 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 298-615 |
| Cow position: | chr13:562102-562430 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr13:13327228-13326899 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr13:34344198-34343870 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-613 |
| Cow position: | chr13:11827440-11827762 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 299-615 |
| Cow position: | chr13:32983114-32983440 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 300-613 |
| Cow position: | chr13:34906244-34906561 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 58 |
Show alignments to all cow chromosomes.