Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 264-615 |
| Cow position: | chr17:1882680-1882322 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 264-615 |
| Cow position: | chr17:38828327-38827963 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 17 |
| Conread position: | 268-611 |
| Cow position: | chr17:253228-252877 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 269-466 |
| Cow position: | chr17:38617475-38617282 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 135, 13 |
| Conread position: | 288-431 |
| Cow position: | chr17:16119845-16119987 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 288-536 |
| Cow position: | chr17:16903271-16903019 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-582 |
| Cow position: | chr17:240680-240375 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 288-598 |
| Cow position: | chr17:1655365-1655682 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-599 |
| Cow position: | chr17:20097928-20098238 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 288-611 |
| Cow position: | chr17:6070923-6070598 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 288-611 |
| Cow position: | chr17:6262249-6261917 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-612 |
| Cow position: | chr17:604679-605004 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 288-615 |
| Cow position: | chr17:137028-136691 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-615 |
| Cow position: | chr17:2553872-2554210 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr17:4084401-4084076 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 288-615 |
| Cow position: | chr17:4210401-4210065 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 69 |
| Conread position: | 288-615 |
| Cow position: | chr17:14242213-14241867 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr17:15327672-15327341 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr17:16855709-16856050 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr17:20085390-20085718 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 289-615 |
| Cow position: | chr17:2245659-2245991 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 291-453 |
| Cow position: | chr17:17127353-17127189 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-458 |
| Cow position: | chr17:1704452-1704621 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-462 |
| Cow position: | chr17:20233133-20232960 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-462 |
| Cow position: | chr17:39950681-39950854 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-466 |
| Cow position: | chr17:37454944-37455122 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-520 |
| Cow position: | chr17:40688-40451 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-553 |
| Cow position: | chr17:13418786-13418516 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-565 |
| Cow position: | chr17:21714369-21714100 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 291-613 |
| Cow position: | chr17:2176367-2176033 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 291-613 |
| Cow position: | chr17:5307353-5307686 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-614 |
| Cow position: | chr17:29825579-29825913 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:452218-451885 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:1458777-1458443 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 200 |
| Conread position: | 291-615 |
| Cow position: | chr17:1705783-1705455 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 291-615 |
| Cow position: | chr17:2264571-2264240 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:3742546-3742211 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:8211037-8210705 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:11380804-11381140 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:11785263-11784944 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:15709607-15709942 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:17257905-17257569 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:18124554-18124877 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:18590812-18590487 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 66 |
| Conread position: | 291-615 |
| Cow position: | chr17:23322044-23322376 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 291-615 |
| Cow position: | chr17:24784552-24784223 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 294-614 |
| Cow position: | chr17:24311225-24310897 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 294-615 |
| Cow position: | chr17:8204309-8203990 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 134 |
| Conread position: | 294-615 |
| Cow position: | chr17:15720834-15720499 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 294-615 |
| Cow position: | chr17:36816073-36815756 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 295-522 |
| Cow position: | chr17:5044832-5045057 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 295-615 |
| Cow position: | chr17:1563617-1563289 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 115 |
| Conread position: | 298-615 |
| Cow position: | chr17:1570011-1570334 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr17:15808350-15808021 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr17:21768736-21769060 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr17:25738676-25738348 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-615 |
| Cow position: | chr17:147308-146974 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 299-615 |
| Cow position: | chr17:1785625-1785947 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 62 |
| Conread position: | 299-615 |
| Cow position: | chr17:14294169-14294490 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 299-615 |
| Cow position: | chr17:15438173-15437859 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 300-571 |
| Cow position: | chr17:4062706-4062434 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 300-615 |
| Cow position: | chr17:20490686-20490373 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 57 |
| Conread position: | 301-615 |
| Cow position: | chr17:732120-732454 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 60 |
Show alignments to all cow chromosomes.