Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 264-615 |
| Cow position: | chr18:40483635-40483276 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 93 |
| Conread position: | 269-602 |
| Cow position: | chr18:28928966-28929303 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 284-613 |
| Cow position: | chr18:25941512-25941172 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 288-443 |
| Cow position: | chr18:17671327-17671476 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 288-465 |
| Cow position: | chr18:28083659-28083479 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-598 |
| Cow position: | chr18:36647779-36647457 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-609 |
| Cow position: | chr18:16092423-16092091 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-610 |
| Cow position: | chr18:35291161-35290833 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 259 |
| Conread position: | 288-613 |
| Cow position: | chr18:22182924-22183252 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:5535599-5535275 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:14418581-14418240 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:16174002-16174350 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:23702478-23702814 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:25922997-25922659 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:27835480-27835817 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr18:36511225-36510890 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 289-609 |
| Cow position: | chr18:19457476-19457140 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 291-457 |
| Cow position: | chr18:10221632-10221464 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-480 |
| Cow position: | chr18:33521815-33521621 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 291-498 |
| Cow position: | chr18:18216110-18215895 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-500 |
| Cow position: | chr18:5202128-5201911 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-503 |
| Cow position: | chr18:38160257-38160476 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-536 |
| Cow position: | chr18:51696896-51696642 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-566 |
| Cow position: | chr18:27539017-27538737 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-576 |
| Cow position: | chr18:51662751-51662459 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-579 |
| Cow position: | chr18:3755546-3755250 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-579 |
| Cow position: | chr18:21530127-21529834 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-593 |
| Cow position: | chr18:32165327-32165636 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-599 |
| Cow position: | chr18:1956567-1956886 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-602 |
| Cow position: | chr18:51484199-51483877 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:16081127-16080792 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:16464259-16464588 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:26243976-26244308 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:37700888-37701219 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 291-615 |
| Cow position: | chr18:51344706-51344378 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:51460239-51460571 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr18:54026402-54026077 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 291-615 |
| Cow position: | chr18:55417326-55416997 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 294-458 |
| Cow position: | chr18:47711726-47711561 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 294-537 |
| Cow position: | chr18:51273505-51273750 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 294-578 |
| Cow position: | chr18:17323005-17322714 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 297-613 |
| Cow position: | chr18:29239695-29239373 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 297-615 |
| Cow position: | chr18:44148819-44149139 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 106, 163 |
| Conread position: | 298-431 |
| Cow position: | chr18:24619025-24618890 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-517 |
| Cow position: | chr18:29222963-29222742 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 188 |
| Conread position: | 298-610 |
| Cow position: | chr18:35295770-35295444 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 59 |
| Conread position: | 298-611 |
| Cow position: | chr18:28969692-28970013 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-613 |
| Cow position: | chr18:36209757-36210073 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 97 |
| Conread position: | 298-614 |
| Cow position: | chr18:32437507-32437834 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr18:19354958-19354636 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr18:30762363-30762691 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr18:32656285-32655958 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-615 |
| Cow position: | chr18:52630654-52630977 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 58 |
| Conread position: | 312-615 |
| Cow position: | chr18:603876-604186 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 312-615 |
| Cow position: | chr18:11272267-11272576 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 56 |
Show alignments to all cow chromosomes.