Cow genome map
Conread name: | Pig2-137D18 |
Conread position: | 230-614 |
Cow position: | chr21:37123618-37124007 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 12 |
Conread position: | 267-615 |
Cow position: | chr21:995724-996079 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 16 |
Conread position: | 268-615 |
Cow position: | chr21:27068254-27068614 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 91 |
Conread position: | 275-511 |
Cow position: | chr21:23802994-23803223 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 83 |
Conread position: | 288-444 |
Cow position: | chr21:33256239-33256082 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-470 |
Cow position: | chr21:24694829-24694658 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 144 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 116, 67 |
Conread position: | 288-487 |
Cow position: | chr21:17143361-17143154 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 158 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-488 |
Cow position: | chr21:21918168-21917960 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-534 |
Cow position: | chr21:34255908-34256159 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-603 |
Cow position: | chr21:30596404-30596729 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-613 |
Cow position: | chr21:36981322-36981001 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 48 |
Conread position: | 288-615 |
Cow position: | chr21:41907-41568 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 69 |
Conread position: | 288-615 |
Cow position: | chr21:1195222-1194892 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 59 |
Conread position: | 288-615 |
Cow position: | chr21:4078732-4078401 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr21:5019830-5019493 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 69 |
Conread position: | 288-615 |
Cow position: | chr21:7155018-7154683 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr21:9894834-9894495 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 72 |
Conread position: | 288-615 |
Cow position: | chr21:10569378-10569044 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 69 |
Conread position: | 288-615 |
Cow position: | chr21:21026166-21025822 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 288-615 |
Cow position: | chr21:31513634-31513970 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr21:44763277-44763609 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr21:47943636-47943303 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 68 |
Conread position: | 288-615 |
Cow position: | chr21:49091756-49092090 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 60 |
Conread position: | 291-438 |
Cow position: | chr21:10519500-10519351 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-441 |
Cow position: | chr21:15398294-15398446 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 122 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-446 |
Cow position: | chr21:469784-469633 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 291-458 |
Cow position: | chr21:19352181-19352350 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-504 |
Cow position: | chr21:35143225-35143443 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 174 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-524 |
Cow position: | chr21:13112711-13112945 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 66 |
Conread position: | 291-540 |
Cow position: | chr21:2538468-2538724 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 66 |
Conread position: | 291-570 |
Cow position: | chr21:5938143-5937859 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 70 |
Conread position: | 291-603 |
Cow position: | chr21:28879034-28879365 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 56 |
Conread position: | 291-614 |
Cow position: | chr21:27148872-27149207 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 68 |
Conread position: | 291-614 |
Cow position: | chr21:28614997-28614666 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 61 |
Conread position: | 291-615 |
Cow position: | chr21:2513533-2513200 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 70 |
Conread position: | 291-615 |
Cow position: | chr21:6966785-6967112 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 66 |
Conread position: | 291-615 |
Cow position: | chr21:7062988-7063323 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 66 |
Conread position: | 291-615 |
Cow position: | chr21:11291370-11291036 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:26634476-26634810 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:27620816-27621151 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:36375670-36375335 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:37373908-37373573 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:39225375-39225709 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 27 |
Conread position: | 291-615 |
Cow position: | chr21:39427758-39427423 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:41797041-41797375 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr21:42916473-42916154 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 19 |
Conread position: | 294-580 |
Cow position: | chr21:24948785-24948498 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 166 |
Conread position: | 294-615 |
Cow position: | chr21:4097337-4097025 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 110, 9 |
Conread position: | 294-615 |
Cow position: | chr21:4186625-4186294 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 63 |
Conread position: | 294-615 |
Cow position: | chr21:21051412-21051069 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 243 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 105, 63 |
Conread position: | 294-615 |
Cow position: | chr21:21171627-21171941 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 63 |
Conread position: | 294-615 |
Cow position: | chr21:34072897-34073228 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 250 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 62, 236 |
Conread position: | 294-615 |
Cow position: | chr21:49297504-49297171 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 63 |
Conread position: | 296-603 |
Cow position: | chr21:20741990-20742306 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 226 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 102, 61 |
Conread position: | 297-615 |
Cow position: | chr21:34656636-34656309 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 27 |
Conread position: | 298-498 |
Cow position: | chr21:33317829-33318036 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 160 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 106, 59 |
Conread position: | 298-600 |
Cow position: | chr21:4138491-4138788 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 196 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 116, 58 |
Conread position: | 298-615 |
Cow position: | chr21:4092008-4091686 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 59 |
Conread position: | 298-615 |
Cow position: | chr21:32397376-32397704 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 58 |
Conread position: | 298-615 |
Cow position: | chr21:34902707-34903025 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 59 |
Conread position: | 299-614 |
Cow position: | chr21:38019904-38019584 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 60 |
Conread position: | 300-613 |
Cow position: | chr21:4717614-4717294 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 220 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 87, 57 |
Show alignments to all cow chromosomes.