Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 263-615 |
| Cow position: | chr22:5014640-5014277 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 28 |
| Conread position: | 270-458 |
| Cow position: | chr22:44479288-44479097 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 270-566 |
| Cow position: | chr22:40588935-40588637 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 87 |
| Conread position: | 288-431 |
| Cow position: | chr22:19601289-19601434 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-508 |
| Cow position: | chr22:41242939-41242717 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 288-577 |
| Cow position: | chr22:24818244-24818537 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 288-599 |
| Cow position: | chr22:34604731-34604412 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-611 |
| Cow position: | chr22:1518517-1518849 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-611 |
| Cow position: | chr22:39467001-39467331 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-613 |
| Cow position: | chr22:5931575-5931897 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-614 |
| Cow position: | chr22:1482925-1482591 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:532608-532292 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:558192-558528 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:6500415-6500748 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-615 |
| Cow position: | chr22:13722231-13722558 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 288-615 |
| Cow position: | chr22:13767837-13767514 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:17325970-17326307 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 80 |
| Conread position: | 288-615 |
| Cow position: | chr22:18813510-18813857 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:22956800-22957134 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:28784630-28784292 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:29038182-29037853 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 288-615 |
| Cow position: | chr22:31315053-31314715 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:31332362-31332707 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:34170853-34170515 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:36356581-36356252 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:36859037-36859372 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr22:44911044-44910707 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 289-615 |
| Cow position: | chr22:13775015-13774690 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 68 |
| Conread position: | 291-478 |
| Cow position: | chr22:9731593-9731788 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 291-503 |
| Cow position: | chr22:15277887-15277667 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-537 |
| Cow position: | chr22:696436-696182 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-560 |
| Cow position: | chr22:10577978-10578255 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-567 |
| Cow position: | chr22:539640-539359 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-579 |
| Cow position: | chr22:28713185-28712892 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-596 |
| Cow position: | chr22:11035797-11035495 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 66 |
| Conread position: | 291-600 |
| Cow position: | chr22:41847042-41847358 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-611 |
| Cow position: | chr22:21591933-21591606 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-613 |
| Cow position: | chr22:5888670-5889004 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-614 |
| Cow position: | chr22:10933717-10934046 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:324648-324989 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:980797-980464 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:3275840-3276175 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:3304146-3304474 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 291-615 |
| Cow position: | chr22:8132276-8132608 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:11609152-11608817 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:11802540-11802875 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:18614783-18614460 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:20238326-20238659 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 291-615 |
| Cow position: | chr22:27307458-27307791 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:28998023-28998358 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:29854363-29854033 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:30676218-30676533 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:35669156-35669491 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 291-615 |
| Cow position: | chr22:37136414-37136103 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 291-615 |
| Cow position: | chr22:44100833-44101154 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 291-615 |
| Cow position: | chr22:44366969-44367302 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 292-489 |
| Cow position: | chr22:25969131-25969332 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 156, 65 |
| Conread position: | 294-613 |
| Cow position: | chr22:15853942-15853605 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 294-613 |
| Cow position: | chr22:27513002-27512677 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 294-615 |
| Cow position: | chr22:50544-50213 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 294-615 |
| Cow position: | chr22:1807459-1807129 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 61 |
| Conread position: | 294-615 |
| Cow position: | chr22:15954525-15954853 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 294-615 |
| Cow position: | chr22:39039469-39039795 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 67 |
| Conread position: | 294-615 |
| Cow position: | chr22:40372913-40372585 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 64 |
| Conread position: | 297-609 |
| Cow position: | chr22:30067965-30068289 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 145 |
| Conread position: | 298-615 |
| Cow position: | chr22:10907699-10908021 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr22:15871300-15870976 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 298-615 |
| Cow position: | chr22:37269598-37269273 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 298-615 |
| Cow position: | chr22:46579221-46579542 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-610 |
| Cow position: | chr22:43235344-43235026 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 58 |
| Conread position: | 299-615 |
| Cow position: | chr22:18029775-18029448 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 301-502 |
| Cow position: | chr22:15355193-15354982 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 302-594 |
| Cow position: | chr22:23826297-23826008 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 309-614 |
| Cow position: | chr22:3806141-3805823 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 52 |
Show alignments to all cow chromosomes.