Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 260-615 |
| Cow position: | chr23:38580194-38579843 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 288-431 |
| Cow position: | chr23:2586588-2586443 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 288-504 |
| Cow position: | chr23:1800145-1799923 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-506 |
| Cow position: | chr23:1326887-1327101 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 161, 69 |
| Conread position: | 288-604 |
| Cow position: | chr23:1021418-1021748 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-611 |
| Cow position: | chr23:2024579-2024902 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-611 |
| Cow position: | chr23:14960445-14960776 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-611 |
| Cow position: | chr23:37200012-37200343 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-612 |
| Cow position: | chr23:2438801-2439135 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 232 |
| Conread position: | 288-615 |
| Cow position: | chr23:4891198-4890861 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr23:5872058-5872395 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 69 |
| Conread position: | 288-615 |
| Cow position: | chr23:16612292-16612625 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 69 |
| Conread position: | 288-615 |
| Cow position: | chr23:19492063-19491725 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr23:36028875-36029213 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 289-615 |
| Cow position: | chr23:4436162-4435828 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 291-440 |
| Cow position: | chr23:1003178-1003329 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-445 |
| Cow position: | chr23:22989373-22989526 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-458 |
| Cow position: | chr23:4533096-4533265 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-458 |
| Cow position: | chr23:19316987-19316818 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-483 |
| Cow position: | chr23:4080644-4080444 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-522 |
| Cow position: | chr23:14264850-14264613 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-525 |
| Cow position: | chr23:21773410-21773652 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-536 |
| Cow position: | chr23:35926000-35925764 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 291-553 |
| Cow position: | chr23:36097322-36097052 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-580 |
| Cow position: | chr23:1339271-1339576 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-604 |
| Cow position: | chr23:4266340-4266663 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-611 |
| Cow position: | chr23:15528089-15527761 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-612 |
| Cow position: | chr23:19441364-19441691 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:943480-943145 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:7313590-7313925 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:11713356-11713691 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:28221209-28220875 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:29442595-29442921 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:29448717-29449041 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 291-615 |
| Cow position: | chr23:41142844-41142513 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 294-603 |
| Cow position: | chr23:31647697-31648006 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 296-615 |
| Cow position: | chr23:8289919-8289578 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 297-465 |
| Cow position: | chr23:10556588-10556750 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 297-615 |
| Cow position: | chr23:1011335-1011664 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 298-576 |
| Cow position: | chr23:22169383-22169095 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-601 |
| Cow position: | chr23:2321447-2321761 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 298-611 |
| Cow position: | chr23:1958658-1958337 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr23:609227-608887 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr23:11781289-11780965 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr23:16496773-16497079 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 58 |
| Conread position: | 299-503 |
| Cow position: | chr23:7492879-7493092 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 299-517 |
| Cow position: | chr23:8705359-8705131 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 300-615 |
| Cow position: | chr23:14971454-14971776 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 301-595 |
| Cow position: | chr23:15659058-15659350 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 307-612 |
| Cow position: | chr23:37652400-37652086 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 50 |
| Conread position: | 313-615 |
| Cow position: | chr23:38583433-38583127 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 99 |
Show alignments to all cow chromosomes.