Cow genome map
Conread name: | Pig2-137D18 |
Conread position: | 260-615 |
Cow position: | chr24:21248322-21248689 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 7 |
Conread position: | 264-475 |
Cow position: | chr24:31381043-31380828 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 176 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 9, 175 |
Conread position: | 268-615 |
Cow position: | chr24:6657638-6657994 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 91 |
Conread position: | 287-615 |
Cow position: | chr24:11691402-11691738 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 70 |
Conread position: | 288-453 |
Cow position: | chr24:33321289-33321462 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 110, 69 |
Conread position: | 288-465 |
Cow position: | chr24:36712847-36712684 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 288-591 |
Cow position: | chr24:16473558-16473263 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 69 |
Conread position: | 288-596 |
Cow position: | chr24:36724663-36724342 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-608 |
Cow position: | chr24:37198426-37198759 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 69 |
Conread position: | 288-611 |
Cow position: | chr24:6412076-6411742 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-614 |
Cow position: | chr24:38640734-38640403 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr24:146001-146346 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr24:18267891-18268225 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 36 |
Conread position: | 288-615 |
Cow position: | chr24:29189883-29189545 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr24:36556984-36557306 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 68 |
Conread position: | 288-615 |
Cow position: | chr24:38004344-38004682 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 101 |
Conread position: | 288-615 |
Cow position: | chr24:39680120-39679807 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr24:40467820-40468146 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 69 |
Conread position: | 289-615 |
Cow position: | chr24:12126502-12126834 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 68 |
Conread position: | 289-615 |
Cow position: | chr24:19467997-19468337 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 69 |
Conread position: | 291-417 |
Cow position: | chr24:27185222-27185094 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-458 |
Cow position: | chr24:6963442-6963273 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 137 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-508 |
Cow position: | chr24:32362527-32362747 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 93, 66 |
Conread position: | 291-546 |
Cow position: | chr24:14350592-14350330 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-559 |
Cow position: | chr24:19688989-19689260 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 19 |
Conread position: | 291-568 |
Cow position: | chr24:17367334-17367609 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 112, 67 |
Conread position: | 291-600 |
Cow position: | chr24:3850161-3849841 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-602 |
Cow position: | chr24:13177589-13177906 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 233 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 157, 66 |
Conread position: | 291-615 |
Cow position: | chr24:208408-208742 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 70 |
Conread position: | 291-615 |
Cow position: | chr24:6079023-6078699 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 66 |
Conread position: | 291-615 |
Cow position: | chr24:6326775-6327102 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:6440346-6440011 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:7064157-7063825 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 144 |
Conread position: | 291-615 |
Cow position: | chr24:11150531-11150863 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 70 |
Conread position: | 291-615 |
Cow position: | chr24:12698424-12698759 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:13234833-13234498 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:14195269-14195600 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:20366959-20366624 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:38584551-38584869 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr24:40551217-40550885 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 294-424 |
Cow position: | chr24:16647314-16647446 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 110, 63 |
Conread position: | 294-430 |
Cow position: | chr24:12466829-12466696 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 294-615 |
Cow position: | chr24:6338958-6338641 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 60 |
Conread position: | 294-615 |
Cow position: | chr24:19642510-19642183 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 63 |
Conread position: | 294-615 |
Cow position: | chr24:29154950-29154629 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 63 |
Conread position: | 298-615 |
Cow position: | chr24:6021492-6021817 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 64 |
Conread position: | 298-615 |
Cow position: | chr24:12148514-12148832 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 59 |
Conread position: | 298-615 |
Cow position: | chr24:41005070-41004749 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 59 |
Conread position: | 299-432 |
Cow position: | chr24:25371520-25371385 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 105, 58 |
Show alignments to all cow chromosomes.