Cow genome map
Conread name: | Pig2-137D18 |
Conread position: | 275-615 |
Cow position: | chr29:2745919-2746266 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 83 |
Conread position: | 281-612 |
Cow position: | chr29:10852257-10851918 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 73 |
Conread position: | 285-542 |
Cow position: | chr29:1307729-1307461 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 193 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 35, 94 |
Conread position: | 288-483 |
Cow position: | chr29:14453813-14453624 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 116, 60 |
Conread position: | 288-488 |
Cow position: | chr29:2692970-2692765 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-530 |
Cow position: | chr29:45461753-45461504 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-538 |
Cow position: | chr29:43518664-43518911 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 147 |
Conread position: | 288-576 |
Cow position: | chr29:529878-530169 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-579 |
Cow position: | chr29:2415556-2415861 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 69 |
Conread position: | 288-601 |
Cow position: | chr29:5980199-5980524 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 72 |
Conread position: | 288-611 |
Cow position: | chr29:6263480-6263814 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-611 |
Cow position: | chr29:7428591-7428926 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-612 |
Cow position: | chr29:107578-107248 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 70 |
Conread position: | 288-615 |
Cow position: | chr29:408738-409073 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:2838816-2839153 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 69 |
Conread position: | 288-615 |
Cow position: | chr29:6934012-6933679 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 73 |
Conread position: | 288-615 |
Cow position: | chr29:9640255-9640594 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:10644891-10645222 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:10821396-10821734 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:14500386-14500049 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 45 |
Conread position: | 288-615 |
Cow position: | chr29:26162316-26162648 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 73 |
Conread position: | 288-615 |
Cow position: | chr29:27260601-27260931 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:31183928-31183590 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 288-615 |
Cow position: | chr29:32582505-32582825 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 53 |
Conread position: | 288-615 |
Cow position: | chr29:39077194-39077529 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 69 |
Conread position: | 289-615 |
Cow position: | chr29:39424619-39424956 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 68 |
Conread position: | 291-477 |
Cow position: | chr29:40619300-40619493 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-478 |
Cow position: | chr29:9080313-9080505 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 158 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 113, 61 |
Conread position: | 291-503 |
Cow position: | chr29:15797247-15797463 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 174 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-557 |
Cow position: | chr29:40293853-40293579 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-592 |
Cow position: | chr29:28657852-28658165 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 65 |
Conread position: | 291-612 |
Cow position: | chr29:666890-667222 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:132039-131710 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:5785330-5784995 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:7846912-7846577 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:13584735-13584404 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 66 |
Conread position: | 291-615 |
Cow position: | chr29:13899183-13898848 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:15260472-15260807 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:15624181-15624520 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 66 |
Conread position: | 291-615 |
Cow position: | chr29:15967036-15967371 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 77 |
Conread position: | 291-615 |
Cow position: | chr29:16171591-16171924 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 65 |
Conread position: | 291-615 |
Cow position: | chr29:17407656-17407314 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:19525772-19526103 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:19890094-19889762 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:21226498-21226165 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:21430336-21430670 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:31095070-31095404 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:32557228-32557563 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 291-615 |
Cow position: | chr29:35299437-35299108 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 66 |
Conread position: | 294-436 |
Cow position: | chr29:22417625-22417760 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 294-517 |
Cow position: | chr29:34739322-34739550 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 62 |
Conread position: | 294-615 |
Cow position: | chr29:8666036-8665699 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 251 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 110, 63 |
Conread position: | 296-615 |
Cow position: | chr29:6873360-6873687 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 61 |
Conread position: | 297-599 |
Cow position: | chr29:32288895-32288587 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 59 |
Conread position: | 297-615 |
Cow position: | chr29:43964979-43965310 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 230 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 107, 60 |
Conread position: | 298-467 |
Cow position: | chr29:31764554-31764380 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 141 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 298-491 |
Cow position: | chr29:32514837-32514637 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 162 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 106, 20 |
Conread position: | 298-612 |
Cow position: | chr29:45625859-45625534 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 59 |
Conread position: | 298-615 |
Cow position: | chr29:608118-608445 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 59 |
Conread position: | 298-615 |
Cow position: | chr29:14209038-14209362 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 59 |
Conread position: | 298-615 |
Cow position: | chr29:23979221-23978891 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 59 |
Conread position: | 298-615 |
Cow position: | chr29:40470923-40470598 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 59 |
Conread position: | 299-613 |
Cow position: | chr29:14082218-14082538 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 11 |
Conread position: | 299-615 |
Cow position: | chr29:20253676-20253357 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 58 |
Conread position: | 300-615 |
Cow position: | chr29:10845464-10845142 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 57 |
Conread position: | 301-615 |
Cow position: | chr29:25991535-25991858 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 107 |
Show alignments to all cow chromosomes.