Cow genome map
| Conread name: | Pig2-137D18 |
| Conread position: | 263-615 |
| Cow position: | chr4:605890-605525 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 284-567 |
| Cow position: | chr4:19095943-19095658 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 288-415 |
| Cow position: | chr4:27372763-27372892 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 288-472 |
| Cow position: | chr4:17539764-17539951 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 288-592 |
| Cow position: | chr4:23305100-23305403 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-602 |
| Cow position: | chr4:19263554-19263240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 288-611 |
| Cow position: | chr4:1048012-1048353 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-613 |
| Cow position: | chr4:36811567-36811255 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 119 |
| Conread position: | 288-615 |
| Cow position: | chr4:358123-357797 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:2350477-2350815 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:3069172-3068845 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:3355722-3356058 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 288-615 |
| Cow position: | chr4:4378633-4378293 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:6445320-6445666 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 288-615 |
| Cow position: | chr4:6863988-6864324 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:10883780-10883444 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:11108831-11109160 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 288-615 |
| Cow position: | chr4:14818677-14818998 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 127 |
| Conread position: | 288-615 |
| Cow position: | chr4:16362445-16362110 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 288-615 |
| Cow position: | chr4:16640851-16640517 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:18815360-18815693 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:25597246-25597578 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:31637428-31637766 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:43317408-43317742 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:46712356-46712689 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 68 |
| Conread position: | 288-615 |
| Cow position: | chr4:48029101-48028766 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:61241525-61241189 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 288-615 |
| Cow position: | chr4:67382526-67382194 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 73 |
| Conread position: | 289-519 |
| Cow position: | chr4:5487147-5487378 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 289-522 |
| Cow position: | chr4:532122-531881 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 291-432 |
| Cow position: | chr4:8378166-8378023 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-446 |
| Cow position: | chr4:30541217-30541374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-457 |
| Cow position: | chr4:5182237-5182073 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 291-465 |
| Cow position: | chr4:67393504-67393328 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-487 |
| Cow position: | chr4:58812723-58812519 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-503 |
| Cow position: | chr4:63000381-63000161 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-560 |
| Cow position: | chr4:54811624-54811901 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-581 |
| Cow position: | chr4:1369759-1370052 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 64 |
| Conread position: | 291-599 |
| Cow position: | chr4:5442292-5442607 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-613 |
| Cow position: | chr4:12606642-12606973 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 291-614 |
| Cow position: | chr4:3128058-3127724 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:161404-161074 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:1928386-1928717 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 291-615 |
| Cow position: | chr4:5611756-5612090 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:6266976-6267310 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 65 |
| Conread position: | 291-615 |
| Cow position: | chr4:6568616-6568285 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:15815257-15815586 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:17034265-17034595 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:17234284-17233950 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:29605237-29605572 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:32214412-32214081 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:33021390-33021725 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:40217078-40216744 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:41473605-41473938 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 291-615 |
| Cow position: | chr4:44594128-44594455 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 291-615 |
| Cow position: | chr4:47751583-47751254 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 144 |
| Conread position: | 291-615 |
| Cow position: | chr4:58622289-58622624 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 293-615 |
| Cow position: | chr4:36898615-36898277 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 64 |
| Conread position: | 294-479 |
| Cow position: | chr4:18327190-18326997 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 294-568 |
| Cow position: | chr4:34385326-34385595 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 294-570 |
| Cow position: | chr4:22903948-22903670 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 294-599 |
| Cow position: | chr4:34176749-34177065 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 294-613 |
| Cow position: | chr4:60626284-60626589 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 294-613 |
| Cow position: | chr4:67468215-67467904 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 294-615 |
| Cow position: | chr4:9798007-9798334 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 294-615 |
| Cow position: | chr4:11391253-11391571 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 294-615 |
| Cow position: | chr4:21973421-21973759 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 206 |
| Conread position: | 296-615 |
| Cow position: | chr4:25877640-25877320 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 298-599 |
| Cow position: | chr4:64799290-64798991 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-603 |
| Cow position: | chr4:35306577-35306890 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 70 |
| Conread position: | 298-609 |
| Cow position: | chr4:57986249-57985930 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-613 |
| Cow position: | chr4:41956996-41956674 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-613 |
| Cow position: | chr4:41961132-41960810 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 298-615 |
| Cow position: | chr4:15459175-15459503 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 299-615 |
| Cow position: | chr4:10055181-10054862 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 56 |
| Conread position: | 299-615 |
| Cow position: | chr4:18336718-18337045 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 299-615 |
| Cow position: | chr4:27336166-27335839 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 300-553 |
| Cow position: | chr4:21573994-21573736 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 322-615 |
| Cow position: | chr4:34182494-34182790 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 32 |
Show alignments to all cow chromosomes.