Cow genome map

Conread name: Pig2-137D18

Conread position: 107-615
Cow position: chr5:40130069-40130588 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 250

Conread position: 266-579
Cow position: chr5:46649513-46649182 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 93

Conread position: 270-615
Cow position: chr5:4755813-4756172 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 91

Conread position: 288-441
Cow position: chr5:58150244-58150395 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 58

Conread position: 288-458
Cow position: chr5:27177986-27177814 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 69

Conread position: 288-458
Cow position: chr5:59278485-59278314 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 72

Conread position: 288-535
Cow position: chr5:70401247-70401015 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 47

Conread position: 288-569
Cow position: chr5:54462387-54462677 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-598
Cow position: chr5:73486581-73486902 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-601
Cow position: chr5:40922352-40922662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-611
Cow position: chr5:44710040-44710373 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-611
Cow position: chr5:64779664-64779998 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-613
Cow position: chr5:46670650-46670313 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-614
Cow position: chr5:3252800-3253120 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 172, 69

Conread position: 288-615
Cow position: chr5:1339581-1339918 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:3501784-3502118 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 288-615
Cow position: chr5:7276173-7275835 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:10854476-10854812 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 69

Conread position: 288-615
Cow position: chr5:18704001-18703664 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:21523465-21523810 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 69

Conread position: 288-615
Cow position: chr5:24644516-24644856 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 152

Conread position: 288-615
Cow position: chr5:25929347-25929682 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:26625863-26626202 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:30581678-30581341 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr5:46626926-46627255 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 288-615
Cow position: chr5:47342063-47341726 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 80

Conread position: 288-615
Cow position: chr5:50604995-50605333 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 288-615
Cow position: chr5:54858756-54859089 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 291-421
Cow position: chr5:50832226-50832094 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 66

Conread position: 291-439
Cow position: chr5:30156695-30156545 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 66

Conread position: 291-449
Cow position: chr5:4879319-4879159 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 66

Conread position: 291-452
Cow position: chr5:74035871-74035708 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 113, 66

Conread position: 291-464
Cow position: chr5:58141903-58142073 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 66

Conread position: 291-468
Cow position: chr5:59083888-59084062 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 69

Conread position: 291-491
Cow position: chr5:71621963-71622171 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 66

Conread position: 291-495
Cow position: chr5:34583973-34583761 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 112, 66

Conread position: 291-532
Cow position: chr5:27550122-27550372 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 66

Conread position: 291-537
Cow position: chr5:12132930-12132686 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 113, 15

Conread position: 291-579
Cow position: chr5:11632932-11633220 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 112

Conread position: 291-580
Cow position: chr5:51166970-51167258 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 66

Conread position: 291-603
Cow position: chr5:6586124-6586444 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-603
Cow position: chr5:10841055-10841372 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-604
Cow position: chr5:54621966-54621634 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 291-613
Cow position: chr5:12641103-12641434 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-613
Cow position: chr5:31708926-31708592 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:2916766-2916439 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:4964036-4964366 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 66

Conread position: 291-615
Cow position: chr5:5105561-5105233 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 66

Conread position: 291-615
Cow position: chr5:5925624-5925959 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:10513937-10514272 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:11922789-11923124 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:12730373-12730708 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:18120136-18120471 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:23957987-23958322 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:26076863-26077197 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:28015402-28015071 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 145

Conread position: 291-615
Cow position: chr5:29031610-29031275 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:30567613-30567277 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:31120869-31121198 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 66

Conread position: 291-615
Cow position: chr5:38661670-38661336 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:42507099-42506764 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:46666345-46666009 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:46792188-46791853 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:47827986-47828315 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:49118005-49118331 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:50390783-50391102 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 66

Conread position: 291-615
Cow position: chr5:51745564-51745235 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 66

Conread position: 291-615
Cow position: chr5:58198360-58198028 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 291-615
Cow position: chr5:59062981-59062646 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr5:59145711-59145375 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 67

Conread position: 294-506
Cow position: chr5:26366917-26366696 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 110, 63

Conread position: 294-610
Cow position: chr5:68591067-68590743 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 127

Conread position: 294-614
Cow position: chr5:47080611-47080304 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 294-615
Cow position: chr5:1229121-1228794 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 63

Conread position: 294-615
Cow position: chr5:40347949-40348276 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 295-530
Cow position: chr5:24152968-24152731 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 94, 62

Conread position: 296-441
Cow position: chr5:75437328-75437185 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 297-458
Cow position: chr5:31098929-31099088 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 107, 60

Conread position: 297-545
Cow position: chr5:70532073-70532328 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 57

Conread position: 297-614
Cow position: chr5:34191266-34190942 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 61

Conread position: 298-603
Cow position: chr5:45180763-45181076 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-612
Cow position: chr5:69623903-69623588 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-613
Cow position: chr5:14782839-14783147 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 298-614
Cow position: chr5:49222165-49222494 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 298-614
Cow position: chr5:58244490-58244815 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr5:6152561-6152885 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 298-615
Cow position: chr5:10773927-10774254 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr5:14543971-14544296 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr5:24219493-24219161 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr5:58190424-58190752 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 300-558
Cow position: chr5:35496506-35496241 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 57

Conread position: 303-560
Cow position: chr5:52436331-52436068 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 55

Conread position: 311-615
Cow position: chr5:6528238-6527935 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Show alignments to all cow chromosomes.