Cow genome map

Conread name: Pig2-137D18

Conread position: 263-442
Cow position: chr6:51895561-51895740 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 19

Conread position: 264-615
Cow position: chr6:13308876-13309238 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 268-615
Cow position: chr6:40318086-40317726 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 269-615
Cow position: chr6:12663814-12664173 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 90

Conread position: 275-615
Cow position: chr6:66547955-66547607 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 285-615
Cow position: chr6:38874177-38874513 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 288-457
Cow position: chr6:25375613-25375784 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 69

Conread position: 288-511
Cow position: chr6:33950685-33950920 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 116, 60

Conread position: 288-562
Cow position: chr6:27527508-27527790 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 69

Conread position: 288-614
Cow position: chr6:65896471-65896806 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 95

Conread position: 288-615
Cow position: chr6:704696-704360 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 320

Conread position: 288-615
Cow position: chr6:1820148-1820480 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 288-615
Cow position: chr6:2580898-2580572 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 288-615
Cow position: chr6:3485916-3486254 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:10646163-10645837 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:12628397-12628071 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 288-615
Cow position: chr6:16592451-16592116 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:24241769-24241433 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:25361770-25361449 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 69

Conread position: 288-615
Cow position: chr6:27474897-27474575 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 69

Conread position: 288-615
Cow position: chr6:28135413-28135078 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 69

Conread position: 288-615
Cow position: chr6:30272409-30272748 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 69

Conread position: 288-615
Cow position: chr6:35824354-35824034 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 146

Conread position: 288-615
Cow position: chr6:35874231-35874568 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:41676418-41676081 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr6:44018349-44018685 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 69

Conread position: 288-615
Cow position: chr6:51717024-51716687 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 289-615
Cow position: chr6:16982318-16982655 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 290-615
Cow position: chr6:1275517-1275851 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 71

Conread position: 291-424
Cow position: chr6:25803518-25803653 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 66

Conread position: 291-444
Cow position: chr6:35417442-35417591 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 291-446
Cow position: chr6:1403584-1403741 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 65

Conread position: 291-452
Cow position: chr6:14502305-14502140 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 70

Conread position: 291-466
Cow position: chr6:28400769-28400947 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 66

Conread position: 291-466
Cow position: chr6:39349868-39349690 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 66

Conread position: 291-487
Cow position: chr6:50720586-50720387 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 42

Conread position: 291-490
Cow position: chr6:66189304-66189500 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 66

Conread position: 291-503
Cow position: chr6:60378638-60378418 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-552
Cow position: chr6:62664251-62663989 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 113, 66

Conread position: 291-553
Cow position: chr6:34128935-34128668 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-560
Cow position: chr6:10043694-10043417 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-560
Cow position: chr6:21833171-21833439 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-574
Cow position: chr6:61052619-61052910 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-590
Cow position: chr6:14927936-14927629 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-594
Cow position: chr6:27151965-27152279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-596
Cow position: chr6:31586785-31587101 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-600
Cow position: chr6:14133267-14133587 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-606
Cow position: chr6:11019136-11018811 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-611
Cow position: chr6:43777734-43777408 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-613
Cow position: chr6:65849428-65849762 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 66

Conread position: 291-614
Cow position: chr6:328884-329213 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 66

Conread position: 291-615
Cow position: chr6:1408172-1408506 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 65

Conread position: 291-615
Cow position: chr6:1796188-1796523 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 70

Conread position: 291-615
Cow position: chr6:2377179-2376853 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:2557126-2556788 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 291-615
Cow position: chr6:5750407-5750075 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 291-615
Cow position: chr6:6094713-6094379 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:11870450-11870787 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 68

Conread position: 291-615
Cow position: chr6:13849552-13849218 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 58

Conread position: 291-615
Cow position: chr6:17595810-17596146 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:18912999-18913332 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:20351614-20351949 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:28186358-28186693 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:33810115-33809780 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:39911803-39911469 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 66

Conread position: 291-615
Cow position: chr6:42266211-42265881 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 66

Conread position: 291-615
Cow position: chr6:43620207-43619879 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:45902410-45902745 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:45936740-45936408 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:46296748-46296415 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:50112578-50112250 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:55238170-55237835 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 70

Conread position: 291-615
Cow position: chr6:58603955-58603633 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 64

Conread position: 291-615
Cow position: chr6:62577707-62578041 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:65929720-65929383 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 66

Conread position: 291-615
Cow position: chr6:67552960-67552625 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr6:68029652-68029321 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 294-613
Cow position: chr6:7177051-7177346 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 79

Conread position: 294-614
Cow position: chr6:16767362-16767694 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 93

Conread position: 294-615
Cow position: chr6:1106759-1107085 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 294-615
Cow position: chr6:14143017-14143344 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 26

Conread position: 294-615
Cow position: chr6:14840336-14840017 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 294-615
Cow position: chr6:18986492-18986174 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 294-615
Cow position: chr6:38274044-38273723 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 63

Conread position: 297-489
Cow position: chr6:3573254-3573055 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 107, 60

Conread position: 297-508
Cow position: chr6:24625117-24625328 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 107, 60

Conread position: 298-483
Cow position: chr6:15278084-15278277 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 59

Conread position: 298-489
Cow position: chr6:1508033-1508232 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 59

Conread position: 298-566
Cow position: chr6:916513-916237 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-611
Cow position: chr6:40864561-40864881 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-613
Cow position: chr6:32001810-32002133 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:7138863-7139192 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:15138698-15139025 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:19104441-19104764 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 298-615
Cow position: chr6:25216771-25216446 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:25791230-25791550 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:37387050-37386725 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr6:53544569-53544240 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 299-604
Cow position: chr6:44148083-44148398 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 58

Conread position: 301-597
Cow position: chr6:16050823-16051130 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 56

Conread position: 326-503
Cow position: chr6:9734672-9734848 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 42

Conread position: 326-615
Cow position: chr6:66234241-66233946 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Show alignments to all cow chromosomes.