Cow genome map

Conread name: Pig2-137D18

Conread position: 264-615
Cow position: chr9:2551988-2552347 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 93

Conread position: 288-418
Cow position: chr9:33069262-33069391 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 288-449
Cow position: chr9:27782483-27782646 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 69

Conread position: 288-458
Cow position: chr9:20577238-20577068 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 69

Conread position: 288-476
Cow position: chr9:3806001-3805808 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 69

Conread position: 288-505
Cow position: chr9:26738425-26738198 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 69

Conread position: 288-508
Cow position: chr9:2288726-2288954 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 96, 69

Conread position: 288-508
Cow position: chr9:12250526-12250298 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 116, 69

Conread position: 288-560
Cow position: chr9:43302812-43303089 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-594
Cow position: chr9:5006384-5006070 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-595
Cow position: chr9:1099001-1098684 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-611
Cow position: chr9:18507419-18507750 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-613
Cow position: chr9:5627224-5626891 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-613
Cow position: chr9:13473372-13473706 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 72

Conread position: 288-614
Cow position: chr9:47005149-47004812 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:649639-649970 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 70

Conread position: 288-615
Cow position: chr9:2485209-2485544 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 288-615
Cow position: chr9:3577075-3577411 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:6251678-6251332 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:9198522-9198188 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 18

Conread position: 288-615
Cow position: chr9:10856430-10856092 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 213

Conread position: 288-615
Cow position: chr9:10939131-10938802 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:11504080-11503751 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:16178002-16177665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 67

Conread position: 288-615
Cow position: chr9:19156873-19157210 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:21411717-21411382 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:27037518-27037182 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:31809990-31809655 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:32971785-32971447 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:37160406-37160741 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 288-615
Cow position: chr9:44521328-44521010 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 288-615
Cow position: chr9:47044378-47044040 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 288-615
Cow position: chr9:54680334-54680680 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 288-615
Cow position: chr9:59480441-59480768 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 289-615
Cow position: chr9:1983224-1982893 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 290-615
Cow position: chr9:34770562-34770238 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 66

Conread position: 291-424
Cow position: chr9:35544124-35544259 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 66

Conread position: 291-447
Cow position: chr9:22473884-22474042 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 66

Conread position: 291-456
Cow position: chr9:3545232-3545065 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 66

Conread position: 291-462
Cow position: chr9:20940861-20940691 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 104, 66

Conread position: 291-477
Cow position: chr9:6921350-6921544 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 66

Conread position: 291-495
Cow position: chr9:5453657-5453445 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 113, 66

Conread position: 291-499
Cow position: chr9:56176179-56175963 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 113, 66

Conread position: 291-502
Cow position: chr9:5861461-5861675 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 167, 70

Conread position: 291-537
Cow position: chr9:34240695-34240948 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-538
Cow position: chr9:26421571-26421823 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-546
Cow position: chr9:1071881-1072142 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 113, 66

Conread position: 291-569
Cow position: chr9:52525562-52525276 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-599
Cow position: chr9:18778656-18778963 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 153

Conread position: 291-611
Cow position: chr9:14535438-14535108 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-613
Cow position: chr9:50326249-50325921 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-614
Cow position: chr9:202886-203216 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:778411-778746 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:1249589-1249925 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:2680979-2680644 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:3311023-3310692 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:5526230-5526555 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:14002448-14002133 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 71

Conread position: 291-615
Cow position: chr9:14045030-14044702 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 66

Conread position: 291-615
Cow position: chr9:17061983-17062316 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 291-615
Cow position: chr9:20181020-20181345 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 66

Conread position: 291-615
Cow position: chr9:22441900-22441584 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 66

Conread position: 291-615
Cow position: chr9:30829160-30828825 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:31091589-31091255 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 57

Conread position: 291-615
Cow position: chr9:37175209-37174874 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:44203664-44203999 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:45875924-45875590 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 291-615
Cow position: chr9:64012816-64013151 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 294-429
Cow position: chr9:17632873-17632739 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 30

Conread position: 294-453
Cow position: chr9:3960741-3960900 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 294-458
Cow position: chr9:31113557-31113395 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 75

Conread position: 294-465
Cow position: chr9:42903425-42903598 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 63

Conread position: 294-506
Cow position: chr9:10759855-10759650 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 162, 63

Conread position: 294-558
Cow position: chr9:791910-792179 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 294-601
Cow position: chr9:6372246-6372558 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 90

Conread position: 294-611
Cow position: chr9:46040854-46041179 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 82

Conread position: 294-614
Cow position: chr9:8164496-8164817 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 52

Conread position: 294-615
Cow position: chr9:2631003-2630671 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 297-615
Cow position: chr9:26569666-26569357 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 59

Conread position: 298-469
Cow position: chr9:15053485-15053658 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 87

Conread position: 298-611
Cow position: chr9:4941093-4941416 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 6

Conread position: 298-615
Cow position: chr9:1728907-1729234 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr9:2213543-2213218 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr9:2806959-2807287 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr9:4648228-4648552 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 210

Conread position: 298-615
Cow position: chr9:6884727-6884401 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 298-615
Cow position: chr9:19078055-19077742 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 62

Conread position: 298-615
Cow position: chr9:49301840-49302159 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 59

Conread position: 299-613
Cow position: chr9:48795896-48796221 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 299-615
Cow position: chr9:38678532-38678205 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 300-458
Cow position: chr9:26081925-26082084 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 57

Conread position: 301-526
Cow position: chr9:2835599-2835827 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 103, 56

Conread position: 301-532
Cow position: chr9:2209429-2209656 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 158, 55

Conread position: 305-615
Cow position: chr9:33593529-33593208 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 52

Show alignments to all cow chromosomes.