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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
1-323
               

               
Cow position:
               
chr11:48428713-48429057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 167
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr11:30354694-30354941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr11:21886904-21886662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr11:15279237-15279004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr11:30171997-30172251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr11:49550442-49550198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
181, 84
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr11:13942442-13942696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
183, 121
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr11:81337334-81337085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr11:3681264-3681011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr11:46036181-46035934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr11:84774749-84774997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr11:50236337-50236059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 215
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr11:55117105-55117388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr11:37118116-37118414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr11:29916179-29916460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr11:31885144-31885447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr11:38638757-38639049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr11:61137566-61137261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 181
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr11:4731970-4732281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 229
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr11:15503733-15504046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 94
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr11:17860522-17860214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 233
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr11:18086706-18086395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 108
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr11:21798587-21798883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr11:35363128-35363441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 29
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr11:47586715-47586405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr11:61427246-61427543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr11:71168943-71168646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr11:42793328-42793028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 74
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr11:22932344-22932033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr11:61454903-61454582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 237
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr11:64043881-64044187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
188, 58
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr11:76606321-76606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr11:81174522-81174836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr11:26535397-26535723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr11:30879309-30879624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 239
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr11:76114284-76114598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 236
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:17112995-17112684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:29947305-29946980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:40486290-40485988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
193, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:43430826-43430507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 241
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:53147908-53147589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 121
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:65495696-65495376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 185
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:71846717-71846396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 237
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:74929412-74929733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:77240993-77241320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:85764591-85764888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:951906-952218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:5032145-5031823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:7589824-7590144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
183, 61
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:19238525-19238206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 227
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:21819820-21819494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
83, 240
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:24967097-24967405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
174, 110
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:43361158-43360832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:50072609-50072898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:53313930-53313622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:58399902-58400213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:58990142-58990454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 233
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr11:77745632-77745306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 226
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr11:58587975-58588298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 238
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr11:48901438-48901127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 84
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr11:83196133-83196452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 96
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr11:57047331-57047011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
157, 121
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr11:25808124-25807795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr11:30165132-30165471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr11:41599096-41598765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 237
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr11:42358756-42359071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr11:49105686-49106018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr11:46413202-46413533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr11:23138440-23138095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:10076406-10076731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 170
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:13499647-13499980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:20601871-20602188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 187
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:27386708-27386376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 201
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:30708124-30708469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:33413865-33414199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 219
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:44642649-44642323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:53778248-53778579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 67
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:62881014-62880663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:63508070-63508389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:77751134-77750807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 121
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr11:3833716-3833390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 224
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr11:66265254-66265565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr11:74316320-74316682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr11:18509377-18509049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 155
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr11:17968944-17968613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 233
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:1625587-1625254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 235
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:15285987-15285645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 238
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:52297588-52297249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 63
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:16251622-16251273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 241
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:27248124-27248464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 126
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:46329132-46329465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
174, 37
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:47566322-47565966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:50153185-50152843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:62490066-62490407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:65430707-65431032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
188, 51
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:69118931-69119264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 237
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr11:81605269-81605600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr11:2091979-2092308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
181, 135
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr11:44031631-44031977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 283
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr11:40819012-40818691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 238
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr11:49152573-49152898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr11:73478256-73478566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr11:30639298-30639012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr11:44637127-44636794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 173
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr11:27939120-27939446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 229
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr11:42017000-42016663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr11:27681135-27681374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr11:4060396-4060172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr11:18912898-18913151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr11:18389226-18388951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr11:40250966-40250689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr11:79019898-79019597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr11:46474057-46473740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
89, 255
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr11:47193168-47193469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr11:41577370-41577063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr11:67746912-67747235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr11:2309507-2309835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr11:35579889-35580230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 79
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr11:62750115-62749785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr11:5328429-5328654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr11:78480435-78480668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr11:18117924-18118159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
184, 131
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr11:11991581-11991815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr11:18890906-18891153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr11:26551054-26551288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 116
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr11:32067395-32067167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr11:49074650-49074417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr11:60823096-60822840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr11:68751012-68750762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr11:75551447-75551196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr11:21499250-21499507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr11:29802918-29802652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr11:67293994-67293711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr11:22103398-22103665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 117
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr11:52464088-52464360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr11:10641104-10640810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
184, 119
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr11:41239636-41239335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 120
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr11:1486234-1485926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 231
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr11:4412384-4412075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 235
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr11:76369883-76369582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
161, 66
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr11:4384266-4384566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 49
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr11:61202789-61203109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
82, 242
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr11:81066946-81066640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 202
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr11:40467486-40467172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr11:59902534-59902837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr11:68207212-68206899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr11:55744109-55744418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 187
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr11:84199047-84198722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
133, 208
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr11:3769651-3769338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr11:8339769-8339458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr11:62979113-62979438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr11:8232925-8232619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
184, 80
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr11:7924949-7924639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr11:21894514-21894203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
6-328
               

               
Cow position:
               
chr11:44818744-44819058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr11:25336707-25337036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr11:58614288-58614624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr11:48672344-48672676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 129
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr11:65694201-65693873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr11:65409526-65409190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 216
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr11:80788275-80787944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 228
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr11:77759121-77758791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 72
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr11:23251968-23251621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr11:31900684-31901017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 154
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr11:45282572-45282899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr11:64029620-64029292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 120
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr11:35874337-35874074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr11:59872563-59872878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 119
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr11:68571035-68570719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 161
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr11:70745900-70745582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr11:10800526-10800843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr11:30191800-30192146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 237
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr11:14949775-14949519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr11:40819-41096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 135
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr11:35881544-35881825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 232
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr11:5197437-5197150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 64
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr11:18140879-18141174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
182, 115
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr11:33350064-33349766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 231
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr11:38235875-38236173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
84, 234
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr11:43524260-43524555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 158
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr11:10094980-10095291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 233
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr11:73512782-73512490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr11:61846368-61846047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 231
               

               
Conread position:
               
8-338
               

               
Cow position:
               
chr11:8428121-8428476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 213
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr11:39115136-39115466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 49
               

               
Conread position:
               
10-295
               

               
Cow position:
               
chr11:85189758-85189459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
10-310
               

               
Cow position:
               
chr11:45277515-45277208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr11:53130455-53130765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 62
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr11:44233997-44234326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr11:2911180-2910951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr11:67940331-67940647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr11:30924786-30925096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr11:34615910-34616204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 223
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr11:64090443-64090156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr11:54333976-54334280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 210
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chr11:82232070-82232360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
277, 81
               

               
Conread position:
               
17-331
               

               
Cow position:
               
chr11:35684852-35684537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 188
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr11:26483368-26483675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr11:39034109-39034318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
18-236
               

               
Cow position:
               
chr11:39994472-39994256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
184, 105
               

               
Conread position:
               
18-238
               

               
Cow position:
               
chr11:56751727-56751512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
155, 54
               

               
Conread position:
               
18-249
               

               
Cow position:
               
chr11:9971311-9971086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
18-275
               

               
Cow position:
               
chr11:72870562-72870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr11:11594786-11595073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr11:865944-866240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 224
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr11:84891096-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr11:31866247-31866547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
147, 201
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr11:33294144-33293822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 222
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr11:29014035-29014276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr11:67951308-67951019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
19-319
               

               
Cow position:
               
chr11:64638874-64638582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr11:26515136-26515346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
20-306
               

               
Cow position:
               
chr11:41809827-41809546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
170, 103
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr11:81614979-81614689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
20-335
               

               
Cow position:
               
chr11:53452693-53452384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr11:47165482-47165178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
22-340
               

               
Cow position:
               
chr11:48271847-48272166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 78
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr11:18067188-18066866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr11:7334069-7333772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 212
               

               
Conread position:
               
26-287
               

               
Cow position:
               
chr11:58600519-58600779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr11:63157252-63156958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
27-346
               

               
Cow position:
               
chr11:955021-955339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 217
               

               
Conread position:
               
30-307
               

               
Cow position:
               
chr11:46451278-46451542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
30-337
               

               
Cow position:
               
chr11:56518650-56518343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
31-316
               

               
Cow position:
               
chr11:35275956-35276245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 223
               

               
Conread position:
               
31-326
               

               
Cow position:
               
chr11:63847512-63847801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 92
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr11:63065319-63065618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 31
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr11:28692088-28691814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
32-319
               

               
Cow position:
               
chr11:22978201-22977924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
33-340
               

               
Cow position:
               
chr11:59156212-59155915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
36-253
               

               
Cow position:
               
chr11:32218331-32218106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
40-233
               

               
Cow position:
               
chr11:30466952-30466749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr11:86926251-86925997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
41-319
               

               
Cow position:
               
chr11:439988-439717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 183
               

               
Conread position:
               
41-319
               

               
Cow position:
               
chr11:70383024-70382745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
41-345
               

               
Cow position:
               
chr11:73924888-73924592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 194
               

               
Conread position:
               
43-345
               

               
Cow position:
               
chr11:43913895-43914186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
44-340
               

               
Cow position:
               
chr11:40793027-40792741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
45-282
               

               
Cow position:
               
chr11:51755990-51756228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
45-323
               

               
Cow position:
               
chr11:30934094-30934373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
45-323
               

               
Cow position:
               
chr11:71868926-71868653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
45-336
               

               
Cow position:
               
chr11:80761702-80761415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr11:70609466-70609738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
46-325
               

               
Cow position:
               
chr11:51044258-51043978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr11:30120986-30120715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
47-340
               

               
Cow position:
               
chr11:68910176-68909884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr11:36848622-36848867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr11:66425193-66424909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr11:34962746-34963015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
57-305
               

               
Cow position:
               
chr11:60302271-60302028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
133, 177
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr11:57111622-57111356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr11:9837414-9837147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
57-326
               

               
Cow position:
               
chr11:18698560-18698831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr11:23232826-23232553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr11:67931803-67931555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
58-322
               

               
Cow position:
               
chr11:62019913-62019643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 182
               

               
Conread position:
               
58-344
               

               
Cow position:
               
chr11:32595154-32595440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
132, 181
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr11:1071405-1071146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
60-236
               

               
Cow position:
               
chr11:70205739-70205914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr11:31930384-31930633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
62-242
               

               
Cow position:
               
chr11:80809955-80809767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
63-307
               

               
Cow position:
               
chr11:7315432-7315192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
178, 9
               

               
Conread position:
               
64-317
               

               
Cow position:
               
chr11:70272997-70273250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
64-340
               

               
Cow position:
               
chr11:1362791-1362506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 179
               

               
Conread position:
               
66-279
               

               
Cow position:
               
chr11:6620596-6620378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 174
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr11:33754205-33753957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
70-322
               

               
Cow position:
               
chr11:53719644-53719893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
71-337
               

               
Cow position:
               
chr11:8148191-8147935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
72-312
               

               
Cow position:
               
chr11:65857559-65857799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
113, 172
               

               
Conread position:
               
73-283
               

               
Cow position:
               
chr11:58022909-58022699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr11:87155215-87155491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr11:62016567-62016350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr11:6835233-6835466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
76-326
               

               
Cow position:
               
chr11:18572509-18572755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 158
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr11:30720805-30721029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 132
               

               
Conread position:
               
78-312
               

               
Cow position:
               
chr11:13190927-13191165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
78-340
               

               
Cow position:
               
chr11:56821548-56821286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
78-345
               

               
Cow position:
               
chr11:83066202-83066468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 158
               

               
Conread position:
               
79-224
               

               
Cow position:
               
chr11:32254607-32254462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-297
               

               
Cow position:
               
chr11:70459283-70459492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 153
               

               
Conread position:
               
81-345
               

               
Cow position:
               
chr11:52381159-52380901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
83-293
               

               
Cow position:
               
chr11:36981280-36981488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
107, 150
               

               
Conread position:
               
83-319
               

               
Cow position:
               
chr11:8988517-8988280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 155
               

               
Conread position:
               
83-319
               

               
Cow position:
               
chr11:79979374-79979600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
83-337
               

               
Cow position:
               
chr11:12111755-12111490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 250
               

               
Conread position:
               
84-345
               

               
Cow position:
               
chr11:15632843-15632583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
85-323
               

               
Cow position:
               
chr11:18210634-18210395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 155
               

               
Conread position:
               
86-237
               

               
Cow position:
               
chr11:72789839-72789685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
86-245
               

               
Cow position:
               
chr11:63920572-63920406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
86-245
               

               
Cow position:
               
chr11:72023791-72023949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
86-309
               

               
Cow position:
               
chr11:2788095-2788320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 150
               

               
Conread position:
               
86-313
               

               
Cow position:
               
chr11:25165161-25165383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
86-317
               

               
Cow position:
               
chr11:40258682-40258463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr11:1668390-1668623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr11:65827014-65826796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr11:38193867-38194104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr11:80012116-80011890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr11:14308354-14308587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr11:42519460-42519690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr11:62965838-62965597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
112, 125
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr11:19508012-19508247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr11:80530086-80530320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
86-335
               

               
Cow position:
               
chr11:18484444-18484209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
86-336
               

               
Cow position:
               
chr11:21844417-21844170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
86-336
               

               
Cow position:
               
chr11:67600483-67600746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr11:9222010-9221763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 117
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr11:30110687-30110925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr11:46580082-46580328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
87-234
               

               
Cow position:
               
chr11:81922597-81922753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr11:9234345-9234517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr11:6234162-6233933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 156
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr11:48932866-48932634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr11:48474425-48474657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr11:81300896-81300636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr11:11125379-11125634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr11:18244225-18243970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 129
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr11:20761562-20761818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
87-346
               

               
Cow position:
               
chr11:65987947-65988201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr11:60470462-60470227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 149
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr11:73354337-73354108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr11:45632046-45631815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 150
               

               
Conread position:
               
89-340
               

               
Cow position:
               
chr11:49935025-49934769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
90-305
               

               
Cow position:
               
chr11:10127894-10127691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
90-335
               

               
Cow position:
               
chr11:35282843-35283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr11:9088575-9088333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
91-297
               

               
Cow position:
               
chr11:24601687-24601898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
91-317
               

               
Cow position:
               
chr11:77766879-77766657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
91-319
               

               
Cow position:
               
chr11:42003233-42002997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
91-319
               

               
Cow position:
               
chr11:67804473-67804699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr11:56892540-56892769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
92-306
               

               
Cow position:
               
chr11:19269349-19269140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr11:32377909-32378126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr11:34830058-34829831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr11:77207770-77207997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
109, 143
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr11:75748157-75748385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr11:71455509-71455746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
92-345
               

               
Cow position:
               
chr11:45646869-45646622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr11:17192559-17192335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 142
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr11:25332006-25331789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr11:51688003-51687774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 143
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr11:58103052-58102826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 146
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr11:71309806-71309577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
95-319
               

               
Cow position:
               
chr11:36496579-36496790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr11:84924371-84924143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
95-326
               

               
Cow position:
               
chr11:17227915-17227698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
96-244
               

               
Cow position:
               
chr11:75510507-75510352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr11:48232468-48232663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr11:377925-377699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr11:2281561-2281347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr11:6400346-6400123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr11:33341420-33341200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
96-325
               

               
Cow position:
               
chr11:62155356-62155580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr11:27462659-27462438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr11:63518740-63518966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
218, 135
               

               
Conread position:
               
96-330
               

               
Cow position:
               
chr11:80520694-80520916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr11:41271863-41272099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr11:10992005-10992246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr11:79728948-79728707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr11:17036826-17036557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
96-346
               

               
Cow position:
               
chr11:13043411-13043174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
97-238
               

               
Cow position:
               
chr11:41315587-41315443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
97-308
               

               
Cow position:
               
chr11:10302462-10302254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
97-312
               

               
Cow position:
               
chr11:16000655-16000867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr11:8105509-8105730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
97-324
               

               
Cow position:
               
chr11:48697174-48697398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr11:11232728-11232482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr11:53773399-53773652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
98-319
               

               
Cow position:
               
chr11:83230657-83230450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr11:32071877-32072100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
98-341
               

               
Cow position:
               
chr11:12555690-12555441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr11:49148778-49148984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
99-319
               

               
Cow position:
               
chr11:50778098-50778320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr11:66041002-66041223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 144
               

               
Conread position:
               
99-326
               

               
Cow position:
               
chr11:50951279-50951508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr11:19247466-19247228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr11:24937392-24937636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
101-322
               

               
Cow position:
               
chr11:45898325-45898103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr11:5790181-5790002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
102-319
               

               
Cow position:
               
chr11:63482694-63482479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
102-322
               

               
Cow position:
               
chr11:34032464-34032252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
104-345
               

               
Cow position:
               
chr11:62045132-62045367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
105-316
               

               
Cow position:
               
chr11:36799561-36799358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
105-319
               

               
Cow position:
               
chr11:59370749-59370959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
105-323
               

               
Cow position:
               
chr11:16262297-16262077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr11:11460232-11460457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
204, 87
               

               
Conread position:
               
106-301
               

               
Cow position:
               
chr11:65159710-65159520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr11:70617581-70617793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr11:27746653-27746871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr11:24584915-24585129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
106-345
               

               
Cow position:
               
chr11:47544863-47545105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 133
               

               
Conread position:
               
108-245
               

               
Cow position:
               
chr11:31227732-31227869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-278
               

               
Cow position:
               
chr11:59673099-59672917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr11:30764217-30764453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
109-339
               

               
Cow position:
               
chr11:30596735-30596953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
110-334
               

               
Cow position:
               
chr11:3233819-3234046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
112-244
               

               
Cow position:
               
chr11:15896947-15896815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-343
               

               
Cow position:
               
chr11:20238414-20238645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr11:56728689-56728884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
113-322
               

               
Cow position:
               
chr11:41426656-41426860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr11:77128411-77128603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr11:83397647-83397857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
113-339
               

               
Cow position:
               
chr11:45872576-45872350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 122
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr11:36647103-36647326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
114-323
               

               
Cow position:
               
chr11:33310714-33310922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr11:2907781-2907564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
116-326
               

               
Cow position:
               
chr11:63516569-63516780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
116-326
               

               
Cow position:
               
chr11:66188576-66188369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr11:31525611-31525805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr11:27722108-27722304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr11:2050326-2050534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 170
               

               
Conread position:
               
117-345
               

               
Cow position:
               
chr11:16342495-16342258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
118-308
               

               
Cow position:
               
chr11:3726033-3726225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr11:35154080-35153854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
118-345
               

               
Cow position:
               
chr11:63520520-63520745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
120-326
               

               
Cow position:
               
chr11:36112166-36112379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
120-335
               

               
Cow position:
               
chr11:64904745-64904960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr11:36113905-36114127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
123-337
               

               
Cow position:
               
chr11:2083900-2084106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
123-343
               

               
Cow position:
               
chr11:65157655-65157440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
123-346
               

               
Cow position:
               
chr11:2917827-2917614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
125-319
               

               
Cow position:
               
chr11:47899031-47899226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
125-337
               

               
Cow position:
               
chr11:36659059-36658856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr11:41438468-41438269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr11:62808892-62808698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
127-345
               

               
Cow position:
               
chr11:26117960-26117749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
128-319
               

               
Cow position:
               
chr11:57725071-57724876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
128-319
               

               
Cow position:
               
chr11:82940860-82940675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr11:26144326-26144151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr11:62239510-62239716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
132-322
               

               
Cow position:
               
chr11:4663277-4663096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
136-323
               

               
Cow position:
               
chr11:35668953-35668763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
136-337
               

               
Cow position:
               
chr11:18341273-18341077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
137-336
               

               
Cow position:
               
chr11:25620629-25620437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
137-345
               

               
Cow position:
               
chr11:65762830-65762626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr11:6329013-6329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
138-322
               

               
Cow position:
               
chr11:33348417-33348233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
138-326
               

               
Cow position:
               
chr11:32436096-32436285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
138-337
               

               
Cow position:
               
chr11:42044223-42044029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
147-323
               

               
Cow position:
               
chr11:2811947-2811780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
151-323
               

               
Cow position:
               
chr11:23586416-23586586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
151-337
               

               
Cow position:
               
chr11:15772942-15772749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
151-337
               

               
Cow position:
               
chr11:39462398-39462586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
156-319
               

               
Cow position:
               
chr11:38874617-38874456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
159-331
               

               
Cow position:
               
chr11:65607905-65607732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
160-319
               

               
Cow position:
               
chr11:36286488-36286643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
171-345
               

               
Cow position:
               
chr11:68912943-68913111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
175-319
               

               
Cow position:
               
chr11:18399522-18399380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
175-326
               

               
Cow position:
               
chr11:71493047-71492901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
182-337
               

               
Cow position:
               
chr11:20684760-20684609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr11:15525771-15525909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
186-317
               

               
Cow position:
               
chr11:9270907-9270781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
186-319
               

               
Cow position:
               
chr11:36672227-36672095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
186-345
               

               
Cow position:
               
chr11:48042219-48042064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
189-323
               

               
Cow position:
               
chr11:61958923-61958795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
189-339
               

               
Cow position:
               
chr11:30954822-30954965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
190-314
               

               
Cow position:
               
chr11:67136615-67136491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
190-323
               

               
Cow position:
               
chr11:28993904-28993781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
190-323
               

               
Cow position:
               
chr11:36301253-36301125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
190-340
               

               
Cow position:
               
chr11:70086149-70086296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
192-323
               

               
Cow position:
               
chr11:53511908-53512034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
193-337
               

               
Cow position:
               
chr11:41176122-41175986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
194-332
               

               
Cow position:
               
chr11:16907214-16907083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
200-326
               

               
Cow position:
               
chr11:40479020-40478897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
201-346
               

               
Cow position:
               
chr11:63499488-63499352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.