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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
1-251
               

               
Cow position:
               
chr12:13965161-13964905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr12:6719935-6720253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr12:23446044-23446256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr12:747856-748095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr12:15259096-15258852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr12:27055218-27055463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr12:11539563-11539304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr12:19851941-19852186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
190, 93
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr12:10847001-10846741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
171, 77
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr12:19420319-19420040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 25
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr12:18550508-18550775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr12:44274232-44273937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 70
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr12:4008669-4008369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr12:19154996-19154706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr12:19508957-19508650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 82
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr12:28011287-28010984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 242
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr12:19040005-19039690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr12:32786370-32786079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr12:31228199-31228494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 34
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr12:1848941-1848611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr12:36568435-36568137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr12:45814652-45814335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 121
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr12:26869184-26868869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 131
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:11583018-11583321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 93
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:18123299-18123606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 121
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:19869084-19869395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 65
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:31959506-31959813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:44766700-44767000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr12:45555805-45555494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
144, 88
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr12:40158624-40158311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr12:20326387-20326703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr12:34473988-34473695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr12:42181526-42181209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr12:47928828-47929142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:2711100-2711426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 237
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:3950723-3950417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 75
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:5800644-5800963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:11835859-11836161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:17716691-17717004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:29969191-29969509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 107
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:44596202-44595880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr12:19865854-19866174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr12:30753338-30753656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr12:27803432-27803114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:2242277-2241947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 205
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:15530658-15531004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:19697024-19697346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:27563765-27563435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:35368242-35368584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:40910678-40910347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 123
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr12:42966613-42966942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr12:794154-794505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr12:6240919-6241260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 239
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr12:3039127-3039454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr12:18421314-18420974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr12:41083664-41084017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 143
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:1774051-1773715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
188, 120
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:3070722-3071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 174
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:3578896-3579237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:4116123-4116439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:7000992-7000653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 137
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:17031218-17031566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:28572315-28572637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:30170274-30170619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 207
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:34673717-34673390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 110
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr12:37770483-37770827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 218
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr12:5632262-5631928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
188, 208
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr12:17472604-17472273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr12:3372306-3372548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
183, 99
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr12:36338615-36338859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr12:17982245-17982563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr12:17000875-17001207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr12:1883892-1883665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr12:5863194-5863421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr12:3880641-3880339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr12:1889973-1889659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 238
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr12:30919051-30919348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr12:30437866-30438182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr12:10895932-10895710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr12:14413955-14414172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr12:2019624-2019867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr12:18233282-18233044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr12:36450409-36450652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 92
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr12:7416555-7416846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
6-304
               

               
Cow position:
               
chr12:29486734-29487027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr12:35218785-35218485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr12:2286196-2286510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 199
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr12:6227015-6226725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
180, 108
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr12:15173435-15173750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 117
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr12:22047102-22047398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr12:42254277-42254593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 73
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr12:19872057-19872354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 66
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr12:3211937-3212258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr12:24440428-24440750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 235
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr12:35807300-35807610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr12:3568566-3568876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr12:7977669-7977976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr12:31532797-31532464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 133
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr12:31742150-31741820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
184, 17
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr12:18944032-18943794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr12:42061298-42061596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
8-233
               

               
Cow position:
               
chr12:29762991-29762747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr12:24755406-24755133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 137
               

               
Conread position:
               
8-313
               

               
Cow position:
               
chr12:21486214-21486505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
289, 87
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr12:22516118-22515806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 115
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr12:9143010-9143337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
9-272
               

               
Cow position:
               
chr12:37123132-37123390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 148
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr12:3600273-3600053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 61
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr12:31429936-31429626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr12:18937010-18937356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 6
               

               
Conread position:
               
11-344
               

               
Cow position:
               
chr12:25560992-25561319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr12:7108812-7109071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
18-236
               

               
Cow position:
               
chr12:39502035-39502259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr12:48437282-48437037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 227
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr12:7919694-7919952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr12:22124648-22124924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
172, 73
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr12:22132342-22132067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
172, 73
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr12:12304032-12304309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
18-322
               

               
Cow position:
               
chr12:19691604-19691306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr12:32987327-32987624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
21-345
               

               
Cow position:
               
chr12:1245925-1246253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
159, 213
               

               
Conread position:
               
21-345
               

               
Cow position:
               
chr12:33323867-33323546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
22-315
               

               
Cow position:
               
chr12:41580749-41581040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
25-345
               

               
Cow position:
               
chr12:17881507-17881811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 120
               

               
Conread position:
               
26-315
               

               
Cow position:
               
chr12:15938628-15938344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 46
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr12:47803791-47804099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 97
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr12:2805407-2805119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
36-335
               

               
Cow position:
               
chr12:27039117-27038813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
41-326
               

               
Cow position:
               
chr12:18076187-18076467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
42-326
               

               
Cow position:
               
chr12:9710553-9710276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr12:16851350-16851079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
48-331
               

               
Cow position:
               
chr12:1223684-1223405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr12:18572295-18572572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
55-340
               

               
Cow position:
               
chr12:44622021-44622304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
56-254
               

               
Cow position:
               
chr12:29119564-29119766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
56-322
               

               
Cow position:
               
chr12:22261148-22260894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
56-322
               

               
Cow position:
               
chr12:46143488-46143752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr12:34466329-34466078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
59-312
               

               
Cow position:
               
chr12:34385845-34385594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 176
               

               
Conread position:
               
59-315
               

               
Cow position:
               
chr12:44905306-44905563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr12:32399864-32400125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr12:9465791-9465529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
61-319
               

               
Cow position:
               
chr12:12017548-12017804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr12:34148678-34148445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 116
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr12:9229805-9229564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
70-345
               

               
Cow position:
               
chr12:35771352-35771071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
72-301
               

               
Cow position:
               
chr12:5134821-5135053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 168
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr12:43788712-43788962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 166
               

               
Conread position:
               
73-319
               

               
Cow position:
               
chr12:32714718-32714970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr12:11056559-11056826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 166
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr12:24559036-24559280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 179
               

               
Conread position:
               
75-319
               

               
Cow position:
               
chr12:26782566-26782808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
115, 165
               

               
Conread position:
               
75-343
               

               
Cow position:
               
chr12:19664830-19664582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
75-345
               

               
Cow position:
               
chr12:30745398-30745671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
115, 163
               

               
Conread position:
               
76-291
               

               
Cow position:
               
chr12:46635257-46635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
78-246
               

               
Cow position:
               
chr12:17495504-17495332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr12:20479623-20479399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
79-308
               

               
Cow position:
               
chr12:30728551-30728320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
83-341
               

               
Cow position:
               
chr12:33457843-33458091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
84-345
               

               
Cow position:
               
chr12:5714323-5714580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
85-282
               

               
Cow position:
               
chr12:25805415-25805221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr12:34332801-34333032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
162, 80
               

               
Conread position:
               
85-319
               

               
Cow position:
               
chr12:40270391-40270166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr12:36954677-36954487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
86-299
               

               
Cow position:
               
chr12:15231985-15232195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr12:48415815-48415584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr12:27563139-27562895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
86-335
               

               
Cow position:
               
chr12:12939234-12938980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
86-335
               

               
Cow position:
               
chr12:18769380-18769130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 173
               

               
Conread position:
               
86-335
               

               
Cow position:
               
chr12:25619681-25619431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr12:42160856-42160631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr12:44518042-44517810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr12:28650654-28650884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr12:8869185-8868947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr12:37994028-37993793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr12:1284761-1284520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr12:3055831-3056075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
88-233
               

               
Cow position:
               
chr12:40307394-40307545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr12:3076925-3076720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 151
               

               
Conread position:
               
89-305
               

               
Cow position:
               
chr12:4866515-4866734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr12:3956076-3955842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
198, 71
               

               
Conread position:
               
89-337
               

               
Cow position:
               
chr12:6411029-6410793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
90-238
               

               
Cow position:
               
chr12:17486437-17486285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
90-244
               

               
Cow position:
               
chr12:14132044-14131884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr12:6687570-6687766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
91-322
               

               
Cow position:
               
chr12:3510266-3510492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
91-326
               

               
Cow position:
               
chr12:30805556-30805787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr12:28582791-28582562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
92-319
               

               
Cow position:
               
chr12:29694335-29694120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr12:6164327-6164094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
92-345
               

               
Cow position:
               
chr12:26317161-26317415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr12:22881755-22881980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
93-345
               

               
Cow position:
               
chr12:5905760-5906006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
95-322
               

               
Cow position:
               
chr12:32391550-32391778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
96-251
               

               
Cow position:
               
chr12:20795613-20795772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
96-324
               

               
Cow position:
               
chr12:34007005-34007236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
90, 140
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr12:9914495-9914722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr12:25455820-25456061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 208
               

               
Conread position:
               
96-339
               

               
Cow position:
               
chr12:18518377-18518611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr12:20777223-20776971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
97-233
               

               
Cow position:
               
chr12:25529737-25529881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr12:41473802-41474016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr12:41091236-41091483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 134
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr12:14523632-14523872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
98-339
               

               
Cow position:
               
chr12:11109478-11109712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
98-344
               

               
Cow position:
               
chr12:18040883-18040646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
99-315
               

               
Cow position:
               
chr12:31841150-31841364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr12:32169245-32169491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
100-310
               

               
Cow position:
               
chr12:4134375-4134588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
101-326
               

               
Cow position:
               
chr12:40110100-40110316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
102-234
               

               
Cow position:
               
chr12:19502708-19502569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
102-245
               

               
Cow position:
               
chr12:10440489-10440633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
103-315
               

               
Cow position:
               
chr12:41214605-41214401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
105-297
               

               
Cow position:
               
chr12:12178636-12178826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
105-336
               

               
Cow position:
               
chr12:941347-941580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
105-341
               

               
Cow position:
               
chr12:37727862-37728085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
105-341
               

               
Cow position:
               
chr12:37733062-37732839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
106-339
               

               
Cow position:
               
chr12:18388566-18388341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
109-238
               

               
Cow position:
               
chr12:37094884-37095013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr12:8710553-8710739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
112-345
               

               
Cow position:
               
chr12:12700053-12699814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr12:44846116-44846315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr12:29780179-29779977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
113-334
               

               
Cow position:
               
chr12:25320646-25320862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
114-324
               

               
Cow position:
               
chr12:30662226-30662018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
117-286
               

               
Cow position:
               
chr12:23154740-23154569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
117-345
               

               
Cow position:
               
chr12:39465305-39465529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
121-322
               

               
Cow position:
               
chr12:24107806-24107616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr12:17702500-17702298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
125-316
               

               
Cow position:
               
chr12:42283102-42282910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
127-337
               

               
Cow position:
               
chr12:3994686-3994900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
128-319
               

               
Cow position:
               
chr12:29162073-29161889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
129-345
               

               
Cow position:
               
chr12:4182957-4182741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr12:5940083-5940274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr12:46673489-46673280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
136-319
               

               
Cow position:
               
chr12:15240978-15240797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
136-322
               

               
Cow position:
               
chr12:13996290-13996093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 174
               

               
Conread position:
               
136-324
               

               
Cow position:
               
chr12:5635702-5635519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
137-339
               

               
Cow position:
               
chr12:38484651-38484449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chr12:43351590-43351759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr12:1093023-1092849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
144-319
               

               
Cow position:
               
chr12:23574524-23574688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
147-309
               

               
Cow position:
               
chr12:24180654-24180812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr12:40028996-40028824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
154-334
               

               
Cow position:
               
chr12:15162914-15163090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
157-323
               

               
Cow position:
               
chr12:38512075-38511908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
175-317
               

               
Cow position:
               
chr12:45680061-45680204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
186-322
               

               
Cow position:
               
chr12:4596253-4596394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
186-345
               

               
Cow position:
               
chr12:6121154-6121313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr12:3906272-3906425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
189-316
               

               
Cow position:
               
chr12:28748741-28748863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
196-334
               

               
Cow position:
               
chr12:7191452-7191321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.