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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
1-319
               

               
Cow position:
               
chr15:23798082-23798400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr15:28039191-28038961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr15:36618637-36618376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:14322608-14322863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:37919296-37919066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr15:23775522-23775757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr15:13669466-13669710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr15:34255304-34255555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr15:33681096-33680833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr15:29542436-29542172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 120
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr15:33605355-33605087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 23
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr15:363453-363179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
192, 54
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr15:28924330-28924614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 122
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr15:15040996-15041291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr15:22751887-22751592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr15:9062137-9062460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 255
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr15:15881360-15881064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 43
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr15:30985358-30985652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
188, 119
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr15:16112841-16112530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr15:14505866-14505554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 229
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr15:19119178-19119477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 137
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr15:31855088-31855393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
183, 70
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr15:25208328-25208636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr15:26896282-26896582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 79
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:1831005-1830685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 232
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:13554778-13554478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:16543025-16543329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:16616632-16616326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:23332424-23332751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 251
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:24617002-24616696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:24797364-24797687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr15:29792487-29792785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr15:1082948-1083254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
183, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr15:3051785-3051472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr15:16936428-16936722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:6970416-6970109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 16
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:9642887-9642550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:15707680-15707989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:20486768-20487085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 240
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:26911642-26911956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 121
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:32204468-32204779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:41583347-41583031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:43626897-43626588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr15:52778096-52778408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr15:20472107-20472425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 149
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr15:5234566-5234884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr15:47822226-47821927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr15:51822581-51822256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
188, 143
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr15:38846526-38846218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr15:9071992-9072317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr15:20352278-20351942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 243
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr15:32979595-32979928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 217
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr15:4373914-4373585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
160, 237
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr15:49738608-49738935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 230
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr15:26421163-26421491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr15:13387519-13387186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr15:27862891-27863217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr15:33625406-33625062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr15:16604259-16603928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr15:20370033-20370352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 48
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr15:794579-794911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
188, 86
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr15:10336190-10335860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 120
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr15:14871180-14870846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr15:21831985-21832325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 234
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr15:22531494-22531171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr15:23567687-23568024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:6530399-6530747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:20390851-20391181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
188, 108
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:24044653-24044998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:50302641-50302283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 252
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr15:37382060-37381750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr15:5536187-5535881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 123
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr15:13285480-13285143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr15:47842828-47843128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
187, 110
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr15:7749709-7750015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
255, 120
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr15:50177533-50177219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 105
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:10456563-10456913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:47279721-47280038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr15:7980586-7980347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr15:24976755-24977004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr15:9267627-9267930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr15:9870979-9871289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 73
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr15:30047100-30047431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 205
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr15:16583276-16583587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr15:36423085-36422759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr15:45245116-45245348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
184, 16
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr15:47892176-47892418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr15:45111991-45111740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
175, 117
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr15:27123115-27123393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
184, 233
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr15:18284677-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr15:53353121-53353413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr15:17233619-17233325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 57
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr15:42143285-42142992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr15:45479442-45479136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 230
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr15:50957360-50957669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 232
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr15:4788526-4788844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 239
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr15:42415701-42415383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr15:20458865-20459180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr15:21388736-21389044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 66
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr15:38898856-38898545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
184, 38
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr15:11289517-11289196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr15:33314012-33314327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 143
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr15:47990327-47990645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 198
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr15:24037975-24038281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr15:25584645-25584981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 222
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr15:33285305-33284986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 69
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr15:20534015-20534340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr15:4918625-4918968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr15:18206083-18206413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr15:23905260-23905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
172, 65
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chr15:693473-693766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr15:19403409-19403109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 79
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr15:4676572-4676881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 159
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr15:51632611-51632916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 195
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr15:16640217-16639905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 118
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr15:5498595-5498911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 228
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr15:36392097-36391794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 89
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr15:22095544-22095225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 65
               

               
Conread position:
               
8-233
               

               
Cow position:
               
chr15:12359690-12359449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr15:13681275-13681509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr15:40290050-40289801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
8-299
               

               
Cow position:
               
chr15:9493865-9494152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr15:43030589-43030892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 142
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr15:1776696-1776996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
8-326
               

               
Cow position:
               
chr15:1329673-1329985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 79
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr15:6331628-6331938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr15:23265126-23265353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr15:26078938-26079254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 164
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr15:4138561-4138257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
11-345
               

               
Cow position:
               
chr15:3699854-3700188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr15:17869865-17870174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 164
               

               
Conread position:
               
15-301
               

               
Cow position:
               
chr15:40999626-40999926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
99, 237
               

               
Conread position:
               
15-338
               

               
Cow position:
               
chr15:16493106-16492783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 224
               

               
Conread position:
               
18-255
               

               
Cow position:
               
chr15:22161002-22160759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
172, 221
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr15:30982337-30982070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr15:22168486-22168184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 229
               

               
Conread position:
               
19-319
               

               
Cow position:
               
chr15:7430404-7430101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr15:28177898-28177660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr15:24285409-24285112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
71, 217
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr15:33976272-33976563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
22-302
               

               
Cow position:
               
chr15:46611337-46611068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
22-319
               

               
Cow position:
               
chr15:22532657-22532362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
22-323
               

               
Cow position:
               
chr15:52380709-52380413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr15:15645144-15644927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr15:15865752-15865992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr15:27281278-27281001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
25-319
               

               
Cow position:
               
chr15:35838670-35838965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 213
               

               
Conread position:
               
26-322
               

               
Cow position:
               
chr15:41418398-41418710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr15:4485559-4485242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 212
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr15:1687572-1687353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr15:53102002-53101723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 108
               

               
Conread position:
               
27-335
               

               
Cow position:
               
chr15:5527601-5527291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
30-345
               

               
Cow position:
               
chr15:13515780-13515467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 94
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr15:53680361-53680643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
32-251
               

               
Cow position:
               
chr15:34176053-34176276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
152, 133
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr15:27247917-27247608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
32-345
               

               
Cow position:
               
chr15:23486764-23487067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
158, 133
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr15:17084616-17084335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
156, 26
               

               
Conread position:
               
35-233
               

               
Cow position:
               
chr15:10450499-10450702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
151, 77
               

               
Conread position:
               
35-322
               

               
Cow position:
               
chr15:8428411-8428131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
264, 125
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr15:28126643-28126926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
169, 197
               

               
Conread position:
               
35-341
               

               
Cow position:
               
chr15:23180825-23180539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
298, 21
               

               
Conread position:
               
35-345
               

               
Cow position:
               
chr15:30820417-30820736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 182
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr15:34283945-34284160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
36-302
               

               
Cow position:
               
chr15:48403742-48404004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
154, 197
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr15:22938931-22939216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr15:42788758-42789047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr15:8962397-8962141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
41-319
               

               
Cow position:
               
chr15:5571236-5571514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 194
               

               
Conread position:
               
41-345
               

               
Cow position:
               
chr15:52739725-52740025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
149, 7
               

               
Conread position:
               
43-313
               

               
Cow position:
               
chr15:19186220-19186490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
47-236
               

               
Cow position:
               
chr15:37238266-37238075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 142
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr15:30316193-30316389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
53-308
               

               
Cow position:
               
chr15:38806112-38806368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 5
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr15:53019783-53019598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
55-322
               

               
Cow position:
               
chr15:36621805-36621533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 182
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr15:12316313-12316047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 183
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr15:6045931-6046193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
57-340
               

               
Cow position:
               
chr15:44209952-44209669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr15:37964922-37964641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
60-278
               

               
Cow position:
               
chr15:26404650-26404440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
60-324
               

               
Cow position:
               
chr15:7827655-7827918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
61-319
               

               
Cow position:
               
chr15:22713451-22713705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
63-313
               

               
Cow position:
               
chr15:16307794-16307544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
127, 176
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr15:39599813-39599560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
69-311
               

               
Cow position:
               
chr15:51831220-51831465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
70-319
               

               
Cow position:
               
chr15:11362807-11363053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 165
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr15:20725247-20725491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
72-322
               

               
Cow position:
               
chr15:10615372-10615610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
72-345
               

               
Cow position:
               
chr15:16449073-16448784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
158, 77
               

               
Conread position:
               
72-346
               

               
Cow position:
               
chr15:40266111-40265833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
118, 257
               

               
Conread position:
               
75-311
               

               
Cow position:
               
chr15:33303698-33303461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
75-337
               

               
Cow position:
               
chr15:44051133-44051392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
76-337
               

               
Cow position:
               
chr15:37716558-37716824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
78-316
               

               
Cow position:
               
chr15:43913721-43913963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
112, 161
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chr15:12063690-12063496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
81-301
               

               
Cow position:
               
chr15:33525788-33525559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
86-229
               

               
Cow position:
               
chr15:24994173-24994313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
86-317
               

               
Cow position:
               
chr15:14020826-14020599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr15:17100361-17100586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
86-321
               

               
Cow position:
               
chr15:45323138-45322910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr15:4535262-4535031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 127
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr15:16823291-16823059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr15:38883512-38883270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr15:23767910-23768147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 147
               

               
Conread position:
               
86-335
               

               
Cow position:
               
chr15:43248416-43248664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
86-336
               

               
Cow position:
               
chr15:20482482-20482738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
96, 166
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr15:33679049-33678809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr15:8230224-8230410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
87-280
               

               
Cow position:
               
chr15:16476389-16476593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 182
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr15:241202-240996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr15:16927730-16927972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr15:36781982-36782201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr15:2952776-2953005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
103, 40
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr15:13846223-13846470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
117, 194
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr15:37931415-37931644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr15:41619832-41620073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
87-331
               

               
Cow position:
               
chr15:1298090-1297851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
87-332
               

               
Cow position:
               
chr15:12785790-12785538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 225
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr15:40343604-40343354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
151, 115
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr15:21941496-21941737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr15:50341459-50341240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
90-334
               

               
Cow position:
               
chr15:34140331-34140094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
91-237
               

               
Cow position:
               
chr15:29861710-29861558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
91-316
               

               
Cow position:
               
chr15:19771477-19771259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr15:29604367-29604581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 157
               

               
Conread position:
               
91-319
               

               
Cow position:
               
chr15:11011259-11011480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr15:19813000-19812758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr15:40009300-40009545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
92-319
               

               
Cow position:
               
chr15:35642369-35642143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr15:6462153-6462377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
92-343
               

               
Cow position:
               
chr15:11692687-11692937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
92-345
               

               
Cow position:
               
chr15:11658216-11658473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
95-323
               

               
Cow position:
               
chr15:47105382-47105164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr15:27972870-27973096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 149
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr15:3572359-3572581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
96-325
               

               
Cow position:
               
chr15:21837034-21836800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr15:21803312-21803551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr15:22137028-22136792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
96-344
               

               
Cow position:
               
chr15:15215365-15215116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr15:5730282-5730042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
94, 85
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr15:39406078-39405864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
97-319
               

               
Cow position:
               
chr15:12723422-12723211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
97-323
               

               
Cow position:
               
chr15:2144788-2145010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr15:5683478-5683249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr15:6586369-6586616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
98-314
               

               
Cow position:
               
chr15:35417279-35417498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
98-337
               

               
Cow position:
               
chr15:21894125-21893887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 145
               

               
Conread position:
               
99-317
               

               
Cow position:
               
chr15:39894920-39894714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr15:8665240-8665494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
100-319
               

               
Cow position:
               
chr15:39621679-39621465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
162, 81
               

               
Conread position:
               
102-316
               

               
Cow position:
               
chr15:10245670-10245877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
103-313
               

               
Cow position:
               
chr15:39436551-39436351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
103-345
               

               
Cow position:
               
chr15:22938439-22938661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
105-326
               

               
Cow position:
               
chr15:21523126-21522905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr15:31857927-31857713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr15:30002024-30001806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
107-294
               

               
Cow position:
               
chr15:26158284-26158467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
108-239
               

               
Cow position:
               
chr15:36787641-36787502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
108-334
               

               
Cow position:
               
chr15:21421274-21421047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr15:5633000-5632807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr15:35112560-35112761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
114-318
               

               
Cow position:
               
chr15:12304968-12304767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
114-331
               

               
Cow position:
               
chr15:38394747-38394530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
115-317
               

               
Cow position:
               
chr15:26903520-26903323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr15:45217145-45216927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr15:50322920-50322703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr15:14740346-14740556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
118-319
               

               
Cow position:
               
chr15:49922463-49922260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
118-326
               

               
Cow position:
               
chr15:37645294-37645104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr15:26573706-26573509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
119-318
               

               
Cow position:
               
chr15:14856155-14856341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
119-345
               

               
Cow position:
               
chr15:39598560-39598343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
120-322
               

               
Cow position:
               
chr15:20289766-20289955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
197, 33
               

               
Conread position:
               
123-346
               

               
Cow position:
               
chr15:11995707-11995927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr15:22886866-22886670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
125-286
               

               
Cow position:
               
chr15:20082076-20081914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
125-327
               

               
Cow position:
               
chr15:15025720-15025524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr15:10846036-10845821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr15:27900194-27900410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr15:8007287-8007105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
136-326
               

               
Cow position:
               
chr15:225498-225686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chr15:37777654-37777493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
138-319
               

               
Cow position:
               
chr15:1804028-1804211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chr15:26918972-26919156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
141-319
               

               
Cow position:
               
chr15:11646189-11646363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
142-319
               

               
Cow position:
               
chr15:5071801-5071974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
144-317
               

               
Cow position:
               
chr15:23115132-23114966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
146-346
               

               
Cow position:
               
chr15:23696622-23696810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
147-324
               

               
Cow position:
               
chr15:4350306-4350475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chr15:34144863-34145031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
150-319
               

               
Cow position:
               
chr15:36347060-36346884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
153-324
               

               
Cow position:
               
chr15:36773406-36773579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
180-319
               

               
Cow position:
               
chr15:12655655-12655789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
181-316
               

               
Cow position:
               
chr15:16657749-16657619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-337
               

               
Cow position:
               
chr15:23572423-23572578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
186-319
               

               
Cow position:
               
chr15:10608055-10608181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
186-337
               

               
Cow position:
               
chr15:23927219-23927365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
195-319
               

               
Cow position:
               
chr15:5567184-5567063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               
Show alignments to all cow chromosomes.