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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
2-229
               

               
Cow position:
               
chr21:37299179-37299414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr21:46462904-46463144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr21:17282417-17282655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr21:20162249-20162492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 151
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr21:28029111-28029355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr21:13300866-13301107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 122
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr21:28599484-28599739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr21:31576228-31576476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr21:36711913-36712165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr21:34254566-34254308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
193, 60
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr21:31158969-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr21:35897907-35897645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr21:5566705-5566995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr21:30990554-30990275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 121
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr21:33263565-33263844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr21:363369-363658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
199, 184
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr21:23683264-23683559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 191
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr21:33420002-33419706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 164
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr21:20045053-20044749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr21:28512255-28512548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr21:33933670-33933360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 202
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr21:937766-938049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr21:32237014-32237317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 76
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr21:33209913-33210224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 73
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr21:45474041-45473730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr21:46912258-46912565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 131
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr21:17174861-17175175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:6833766-6834078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:7582191-7581874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
181, 100
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:13128382-13128070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:14760299-14760600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:27743455-27743775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 154
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:28617316-28617617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:34653801-34654103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr21:40244148-40244468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr21:18494692-18495000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 53
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr21:24796320-24796007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
188, 62
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr21:36756329-36756629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:395592-395903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 92
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:912247-911935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:2786078-2785745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:4399514-4399835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:5455272-5454957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:12153847-12154165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 237
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:28989332-28989640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:28998193-28997868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 172
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:42384222-42384542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:44671467-44671783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 202
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr21:46849405-46849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr21:43357547-43357226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr21:32535693-32536009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 11
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr21:39401314-39401634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 121
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr21:24864869-24865202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
115, 238
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr21:34010673-34010352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 53
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr21:9415957-9416293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr21:32574445-32574764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 162
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:3236246-3236570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 121
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:3813753-3813439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:10071215-10070885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
313, 163
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:10263756-10264077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:10726995-10727321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 123
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:15584685-15584375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:28810535-28810218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:34391252-34390931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr21:46973421-46973088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 244
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr21:12973536-12973203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr21:8289925-8289588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
188, 37
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr21:15545651-15545316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr21:23479002-23478668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr21:33997511-33997180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 227
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr21:47802548-47802209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 220
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr21:2367054-2367383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr21:16612343-16612676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:1463947-1464282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:5392824-5392484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:13089763-13089416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:13489357-13489698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
188, 100
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:19363736-19363407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
188, 84
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:22719066-22718731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 77
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:24858025-24858367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 237
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:31691195-31691537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:33983096-33982755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 238
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:44514979-44515316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 206
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr21:46263891-46264224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr21:12616856-12617192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 77
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr21:15742383-15742035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:24130801-24131029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr21:5459681-5459451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr21:29942717-29943030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr21:18850511-18850174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 189
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr21:26648288-26647964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 107
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr21:23821885-23822187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 136
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr21:28993909-28993590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 251
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr21:28734195-28733882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 230
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr21:25764351-25764668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr21:24764984-24765338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 135
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr21:11645268-11644914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 245
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr21:12961196-12960846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 244
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr21:27230075-27229739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 77
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr21:25603463-25603233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr21:39883786-39884012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr21:37941964-37941716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr21:17433534-17433266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr21:25344596-25344868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr21:38867849-38867566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr21:13954229-13954533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 235
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr21:7564604-7564300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 135
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr21:12366105-12366399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr21:40786389-40786695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 35
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr21:5153335-5153646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 293
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr21:33729151-33729451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 229
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr21:23984566-23984254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 233
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr21:39889026-39888721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr21:426510-426832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 88
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr21:5596878-5597178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr21:25382716-25383045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 162
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr21:34738316-34738638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr21:393739-394050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 233
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr21:5344379-5344688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 115
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr21:16696088-16696402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 135
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr21:30849226-30848916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr21:4998767-4998453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 120
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr21:17479102-17479405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr21:27863801-27863483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 117
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr21:37706699-37706387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr21:4905249-4904931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 104
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr21:4282146-4281831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr21:17714031-17714361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
186, 221
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:10514530-10514850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
326, 80
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:20925787-20925459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 35
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:23586581-23586926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:27341872-27341547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 53
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:28881867-28882181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:30231982-30231650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:30607385-30607043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 212
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:42914028-42913699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 237
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:45866656-45866978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr21:29069610-29069276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 83
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr21:24607101-24607438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 231
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr21:21216423-21216088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr21:15976360-15976658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr21:22855938-22856245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr21:23672465-23672778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 87
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr21:13897912-13898216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr21:24222822-24222504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr21:8985268-8985596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 205
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr21:25127329-25127648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 64
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr21:6764983-6764650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 131
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr21:29214435-29214206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
8-245
               

               
Cow position:
               
chr21:17218893-17218654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr21:36163243-36162949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 227
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr21:4080074-4080376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr21:5898676-5898370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
8-335
               

               
Cow position:
               
chr21:36793602-36793936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 205
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr21:18289383-18289713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr21:641304-641639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 157
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr21:24085857-24085613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr21:33562735-33563036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr21:23785749-23786058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 118
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr21:13703965-13703652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr21:42023856-42024169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 84
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr21:17511501-17511804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chr21:17643240-17642981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
166, 81
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr21:21480456-21480140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 111
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr21:41957451-41957128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 222
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr21:16188069-16187781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
176, 40
               

               
Conread position:
               
15-337
               

               
Cow position:
               
chr21:36795327-36795647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr21:22140608-22140383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
185, 106
               

               
Conread position:
               
18-237
               

               
Cow position:
               
chr21:32829165-32828942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr21:41040595-41040839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
18-302
               

               
Cow position:
               
chr21:44114400-44114125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr21:17475550-17475843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr21:45915974-45915686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
153, 123
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr21:26829505-26829232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr21:7132732-7132439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
172, 105
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr21:20160414-20160706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 105
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr21:23500091-23499800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
166, 108
               

               
Conread position:
               
18-323
               

               
Cow position:
               
chr21:23801390-23801096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr21:17434590-17434285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
18-330
               

               
Cow position:
               
chr21:24887727-24888046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr21:44252098-44251801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr21:13751117-13751436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
18-345
               

               
Cow position:
               
chr21:41155592-41155917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 90
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr21:26852987-26853211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
19-322
               

               
Cow position:
               
chr21:42500762-42501070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr21:16166901-16166673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
20-323
               

               
Cow position:
               
chr21:48484708-48484415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr21:36819487-36819193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
26-326
               

               
Cow position:
               
chr21:3585618-3585333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 80
               

               
Conread position:
               
27-312
               

               
Cow position:
               
chr21:17722764-17723037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr21:6713800-6713495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr21:21223024-21223329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
30-319
               

               
Cow position:
               
chr21:44826133-44825863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
157, 31
               

               
Conread position:
               
30-345
               

               
Cow position:
               
chr21:23150277-23149968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 93
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr21:49700292-49699991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 203
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr21:34011358-34011144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr21:13256546-13256761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
40-340
               

               
Cow position:
               
chr21:42905623-42905328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
41-318
               

               
Cow position:
               
chr21:10151548-10151825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
149, 82
               

               
Conread position:
               
41-337
               

               
Cow position:
               
chr21:19977088-19977379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
218, 28
               

               
Conread position:
               
42-319
               

               
Cow position:
               
chr21:38900527-38900804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 265
               

               
Conread position:
               
44-316
               

               
Cow position:
               
chr21:5636965-5636693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
133, 194
               

               
Conread position:
               
44-319
               

               
Cow position:
               
chr21:23322325-23322050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 80
               

               
Conread position:
               
44-326
               

               
Cow position:
               
chr21:13410067-13409789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
146, 216
               

               
Conread position:
               
54-240
               

               
Cow position:
               
chr21:28919857-28919666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr21:33489-33745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr21:42348909-42348657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 182
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr21:15445310-15445045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 179
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr21:41878245-41878515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr21:27124359-27124069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr21:9278138-9278405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr21:8351530-8351297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
61-245
               

               
Cow position:
               
chr21:16270512-16270695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr21:24714420-24714674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr21:31676275-31676531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
63-235
               

               
Cow position:
               
chr21:11877159-11877334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
66-283
               

               
Cow position:
               
chr21:24797473-24797679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr21:48251252-48250999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 173
               

               
Conread position:
               
72-240
               

               
Cow position:
               
chr21:37282093-37282265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr21:30592514-30592279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr21:45330158-45329910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
74-252
               

               
Cow position:
               
chr21:34237181-34237357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
75-302
               

               
Cow position:
               
chr21:13303606-13303830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
120, 158
               

               
Conread position:
               
75-345
               

               
Cow position:
               
chr21:23535500-23535763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
77-322
               

               
Cow position:
               
chr21:13365130-13365371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
78-322
               

               
Cow position:
               
chr21:3818007-3818241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
193, 6
               

               
Conread position:
               
82-319
               

               
Cow position:
               
chr21:19258620-19258852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 156
               

               
Conread position:
               
82-326
               

               
Cow position:
               
chr21:3498292-3498532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
84-323
               

               
Cow position:
               
chr21:41597611-41597853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 164
               

               
Conread position:
               
85-322
               

               
Cow position:
               
chr21:40589685-40589454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
86-247
               

               
Cow position:
               
chr21:4276796-4276623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr21:34159758-34159958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr21:41579549-41579761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
86-299
               

               
Cow position:
               
chr21:34835625-34835426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
86-300
               

               
Cow position:
               
chr21:14464375-14464593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr21:29002364-29002141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
86-315
               

               
Cow position:
               
chr21:45355634-45355859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr21:18780172-18779943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr21:34739647-34739870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr21:8206588-8206799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr21:1058875-1059110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr21:6051304-6051538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr21:45330810-45330566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr21:28955320-28955552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
86-339
               

               
Cow position:
               
chr21:35996969-35997219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr21:8549479-8549734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr21:12801946-12801697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr21:18828511-18828250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
86-346
               

               
Cow position:
               
chr21:47067089-47066844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr21:24094945-24094727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
177, 83
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr21:27521526-27521299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr21:3381282-3381040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr21:28443580-28443331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr21:37361675-37361426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr21:29484783-29485034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 36
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr21:41620918-41621177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
88-339
               

               
Cow position:
               
chr21:42053465-42053217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
122, 143
               

               
Conread position:
               
88-340
               

               
Cow position:
               
chr21:42145716-42145962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
89-322
               

               
Cow position:
               
chr21:28944563-28944333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 159
               

               
Conread position:
               
89-323
               

               
Cow position:
               
chr21:13738372-13738594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
89-323
               

               
Cow position:
               
chr21:17674435-17674199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
90-323
               

               
Cow position:
               
chr21:33727659-33727433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 133
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr21:46242436-46242228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
91-319
               

               
Cow position:
               
chr21:13585255-13585026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr21:30150466-30150234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:10005083-10004841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr21:42135820-42135588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 147
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr21:35569580-35569336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
92-343
               

               
Cow position:
               
chr21:21077133-21077376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
93-329
               

               
Cow position:
               
chr21:9998916-9998676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
93-340
               

               
Cow position:
               
chr21:23568013-23568267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
95-242
               

               
Cow position:
               
chr21:1510879-1511027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
96-236
               

               
Cow position:
               
chr21:9334451-9334310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
96-289
               

               
Cow position:
               
chr21:13163701-13163889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
96-316
               

               
Cow position:
               
chr21:31253343-31253569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr21:1591359-1591578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr21:42841783-42841572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr21:17193952-17193708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr21:10118361-10118612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 144
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr21:10601560-10601323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
221, 27
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr21:38449644-38449393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
96, 108
               

               
Conread position:
               
97-306
               

               
Cow position:
               
chr21:40065506-40065299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr21:25286318-25286540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr21:31277630-31277846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
97-323
               

               
Cow position:
               
chr21:5426755-5426973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr21:33791558-33791331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 147
               

               
Conread position:
               
99-322
               

               
Cow position:
               
chr21:2927392-2927171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
99-332
               

               
Cow position:
               
chr21:47764301-47764074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr21:14452041-14452286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
100-322
               

               
Cow position:
               
chr21:6102457-6102229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
101-292
               

               
Cow position:
               
chr21:4268686-4268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr21:28027616-28027848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
101-345
               

               
Cow position:
               
chr21:18845202-18844960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
103-344
               

               
Cow position:
               
chr21:9990329-9990562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
104-343
               

               
Cow position:
               
chr21:28190844-28191084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr21:46143760-46144003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
105-345
               

               
Cow position:
               
chr21:18842421-18842185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr21:15911218-15911432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
106-343
               

               
Cow position:
               
chr21:13488337-13488576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
107-326
               

               
Cow position:
               
chr21:39450349-39450128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr21:31038668-31038437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
108-322
               

               
Cow position:
               
chr21:17183741-17183954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
109-324
               

               
Cow position:
               
chr21:45439428-45439206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr21:22194287-22194064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
112-345
               

               
Cow position:
               
chr21:8235720-8235503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr21:4723304-4723481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr21:19937108-19936917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr21:32339912-32339709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr21:37345277-37345069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr21:18790731-18790527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
115-311
               

               
Cow position:
               
chr21:10608629-10608432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr21:27146164-27145971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr21:26244756-26244946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr21:47861022-47861229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
118-324
               

               
Cow position:
               
chr21:712764-712960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
120-319
               

               
Cow position:
               
chr21:10000912-10001103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr21:18065090-18064871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
123-309
               

               
Cow position:
               
chr21:6765715-6765898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr21:28244311-28244514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
124-319
               

               
Cow position:
               
chr21:10114493-10114305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
127-319
               

               
Cow position:
               
chr21:27624551-27624736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr21:13840164-13840371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr21:47009399-47009183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
132-319
               

               
Cow position:
               
chr21:45921215-45921030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr21:24642365-24642552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr21:11456962-11456782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
136-337
               

               
Cow position:
               
chr21:10633793-10633593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
137-317
               

               
Cow position:
               
chr21:10823402-10823593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
142-345
               

               
Cow position:
               
chr21:18041989-18041795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
143-325
               

               
Cow position:
               
chr21:957521-957706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
145-322
               

               
Cow position:
               
chr21:42007603-42007432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
146-337
               

               
Cow position:
               
chr21:20152806-20153000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chr21:11250726-11250907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
150-326
               

               
Cow position:
               
chr21:12462109-12461935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
152-322
               

               
Cow position:
               
chr21:29978899-29978729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
152-345
               

               
Cow position:
               
chr21:17875332-17875141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr21:34151450-34151638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
172-319
               

               
Cow position:
               
chr21:5985431-5985288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
177-323
               

               
Cow position:
               
chr21:21077494-21077639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
186-321
               

               
Cow position:
               
chr21:23980280-23980150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
190-323
               

               
Cow position:
               
chr21:4568191-4568316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
192-337
               

               
Cow position:
               
chr21:6997846-6997984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
192-345
               

               
Cow position:
               
chr21:30835270-30835418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
203-337
               

               
Cow position:
               
chr21:47363823-47363692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
205-340
               

               
Cow position:
               
chr21:10410139-10410268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.