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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
1-322
               

               
Cow position:
               
chr28:16412402-16412719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr28:30977941-30978247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr28:31972097-31971769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr28:28766254-28765918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
189, 32
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr28:11356272-11356026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr28:16388307-16388524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr28:8372127-8372370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 82
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr28:30967123-30967363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
183, 141
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr28:2814842-2814597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr28:3770014-3769759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 185
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr28:2222452-2222201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr28:11924164-11923880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr28:14234641-14234910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr28:16441046-16441323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr28:22322921-22323218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
190, 203
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr28:12430263-12430558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr28:12049057-12048750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr28:23793663-23793354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr28:17738422-17738113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr28:21104188-21103874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr28:29806541-29806223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 93
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr28:23530520-23530832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
125, 156
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr28:8682195-8681878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 229
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr28:4070621-4070936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr28:2280012-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 237
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr28:3474628-3474928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr28:3745859-3746171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr28:10682166-10681854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:13356926-13356606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 70
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:18790668-18790988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:23720999-23721304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:25070757-25071093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:25727037-25727340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 120
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr28:34878313-34878000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr28:3144231-3143913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr28:10879430-10879738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 187
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr28:22171073-22170743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr28:14493198-14493515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr28:18462968-18462638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr28:4022038-4022360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 104
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr28:16084983-16085298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 19
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr28:19295706-19295383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 89
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr28:21354880-21355200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 227
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr28:21363414-21363722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr28:34443107-34442770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:5817508-5817824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 48
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:9426686-9426366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:12942048-12942366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
285, 67
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:13267437-13267773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:14933618-14933952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr28:6051371-6051721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr28:11787050-11786733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr28:21380537-21380866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 100
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr28:25399546-25399858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr28:30327428-30327102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr28:8787206-8787533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:3024253-3023920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:7864987-7865320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:11752489-11752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 237
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:19222489-19222157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 121
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:21844612-21844951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:21868107-21868450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:25806253-25806566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:28163752-28164082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 96
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:30293931-30293595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr28:33163801-33163467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr28:18934126-18934448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr28:5117813-5118042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr28:20312931-20313252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr28:21598596-21598267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 120
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr28:20760264-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr28:13693408-13693719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 161
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr28:6971680-6971381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr28:26922711-26922397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr28:25563737-25564070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr28:1837666-1837986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
187, 59
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr28:5203864-5204188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
323, 52
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr28:7549403-7549065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr28:10295851-10296112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr28:10529805-10529547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
199, 66
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr28:3479925-3480218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 233
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr28:28798633-28798334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 230
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr28:15272599-15272300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr28:15375162-15374855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr28:11426876-11426572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
188, 48
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr28:11451815-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 249
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr28:22132586-22132898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 223
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr28:10642356-10642044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr28:14150898-14151205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr28:23839872-23840176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr28:17316524-17316849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 56
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr28:10606951-10606640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr28:10744865-10745199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 233
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr28:16109613-16109931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
198, 66
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr28:4046808-4047052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 105
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr28:7685015-7684713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr28:5792363-5792679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr28:23616063-23616382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr28:25701199-25700898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr28:8347383-8347714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 236
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr28:9285702-9285377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 16
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr28:3750981-3751198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 115
               

               
Conread position:
               
8-224
               

               
Cow position:
               
chr28:6577321-6577536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
178, 56
               

               
Conread position:
               
8-299
               

               
Cow position:
               
chr28:13371514-13371223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr28:11931724-11931413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
178, 231
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr28:17287890-17288188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 61
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr28:34150876-34150553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr28:3914372-3914701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 118
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr28:22372012-22371740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
168, 36
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr28:4282828-4282514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 206
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr28:18717461-18717143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr28:8022447-8022109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 155
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr28:16211432-16211201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
13-302
               

               
Cow position:
               
chr28:30803270-30803559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
17-325
               

               
Cow position:
               
chr28:28904013-28903692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr28:4536142-4536449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr28:34123172-34122976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
18-322
               

               
Cow position:
               
chr28:5826620-5826924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 165
               

               
Conread position:
               
18-323
               

               
Cow position:
               
chr28:23480589-23480284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr28:15600936-15601250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr28:15677572-15677865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr28:29392674-29392994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
172, 220
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr28:17638191-17637898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
171, 53
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr28:16686708-16686933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr28:7590509-7590208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr28:4880590-4880293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 210
               

               
Conread position:
               
20-325
               

               
Cow position:
               
chr28:24343048-24343346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr28:7698303-7697993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 41
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr28:14657371-14657652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr28:26269006-26269298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
21-319
               

               
Cow position:
               
chr28:19222919-19222627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 65
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr28:4308223-4307917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
21-345
               

               
Cow position:
               
chr28:10534252-10533939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 38
               

               
Conread position:
               
25-313
               

               
Cow position:
               
chr28:11827165-11827452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
25-337
               

               
Cow position:
               
chr28:7512911-7512599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr28:5366464-5366226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr28:16401578-16401871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr28:26684796-26685088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
27-326
               

               
Cow position:
               
chr28:2124120-2124405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
252, 98
               

               
Conread position:
               
28-312
               

               
Cow position:
               
chr28:10888345-10888627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 212
               

               
Conread position:
               
30-281
               

               
Cow position:
               
chr28:3161393-3161138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr28:15007846-15008135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
33-318
               

               
Cow position:
               
chr28:5931034-5931322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 207
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr28:5553238-5552953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
298, 78
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr28:6059775-6059477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr28:16879568-16879383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
47-337
               

               
Cow position:
               
chr28:23008027-23007745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
48-335
               

               
Cow position:
               
chr28:31987306-31987596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr28:15044152-15043868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
52-318
               

               
Cow position:
               
chr28:18354610-18354355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr28:9390657-9390391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
55-222
               

               
Cow position:
               
chr28:8103678-8103508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
56-272
               

               
Cow position:
               
chr28:16450981-16450780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr28:31110294-31110037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
57-318
               

               
Cow position:
               
chr28:29455941-29455687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr28:7228673-7228401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
59-233
               

               
Cow position:
               
chr28:15063626-15063444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr28:7606947-7607202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
64-322
               

               
Cow position:
               
chr28:26784750-26784492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr28:26743340-26743611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr28:29953122-29952951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr28:23410601-23410351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
71-323
               

               
Cow position:
               
chr28:20409129-20409364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
72-322
               

               
Cow position:
               
chr28:9177027-9176782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
72-323
               

               
Cow position:
               
chr28:27218048-27218298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:15263998-15263742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
75-323
               

               
Cow position:
               
chr28:5128998-5128757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
75-337
               

               
Cow position:
               
chr28:616132-616371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
78-312
               

               
Cow position:
               
chr28:19133516-19133755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
78-319
               

               
Cow position:
               
chr28:30608448-30608220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
81-298
               

               
Cow position:
               
chr28:3408482-3408258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
84-339
               

               
Cow position:
               
chr28:3493046-3492796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr28:10172675-10172451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
85-317
               

               
Cow position:
               
chr28:4057725-4057949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr28:22484990-22485185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr28:32747679-32747862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr28:13176937-13176711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr28:4841655-4841425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr28:11380303-11380068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 168
               

               
Conread position:
               
86-325
               

               
Cow position:
               
chr28:16244019-16243783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 149
               

               
Conread position:
               
86-334
               

               
Cow position:
               
chr28:26719100-26719336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
232, 56
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr28:27428492-27428740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
242, 97
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr28:16253114-16252892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr28:25424562-25424327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr28:19026262-19026033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 88
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr28:24996848-24996612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
87-328
               

               
Cow position:
               
chr28:25249096-25249334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 147
               

               
Conread position:
               
88-345
               

               
Cow position:
               
chr28:6861695-6861948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr28:6307635-6307860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
90-280
               

               
Cow position:
               
chr28:32813255-32813063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr28:5773387-5773605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr28:13865590-13865818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
213, 81
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr28:2862606-2862861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
93-233
               

               
Cow position:
               
chr28:24646287-24646435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
96-245
               

               
Cow position:
               
chr28:4938588-4938739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
96-316
               

               
Cow position:
               
chr28:22321172-22321393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr28:13242074-13241855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 121
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr28:26103465-26103681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr28:8408486-8408708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr28:13607635-13607874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
96-344
               

               
Cow position:
               
chr28:14218726-14218478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr28:2905330-2905568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr28:3078928-3078688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr28:16386756-16386513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr28:21502145-21502385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr28:22345769-22346014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
97-312
               

               
Cow position:
               
chr28:2898746-2898961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 133
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr28:5236849-5236611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr28:20963780-20963555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
99-317
               

               
Cow position:
               
chr28:8348901-8348684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr28:16204577-16204360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
99-338
               

               
Cow position:
               
chr28:25596385-25596616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
101-345
               

               
Cow position:
               
chr28:14649102-14649344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
102-235
               

               
Cow position:
               
chr28:7389081-7389220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
102-250
               

               
Cow position:
               
chr28:13902203-13902051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
103-345
               

               
Cow position:
               
chr28:11423047-11422820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
106-307
               

               
Cow position:
               
chr28:4914342-4914137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 133
               

               
Conread position:
               
106-315
               

               
Cow position:
               
chr28:3077753-3077955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
107-239
               

               
Cow position:
               
chr28:25498743-25498603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr28:19394390-19394604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr28:5144759-5144546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
112-319
               

               
Cow position:
               
chr28:28076642-28076440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr28:34430660-34430444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr28:11884756-11884527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr28:23775812-23776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr28:12951202-12951404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr28:9099704-9099921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr28:7980649-7980424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr28:8656965-8656772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr28:750997-751203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
119-308
               

               
Cow position:
               
chr28:5658326-5658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr28:10053566-10053347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr28:10478571-10478380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
120-331
               

               
Cow position:
               
chr28:13447482-13447679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
121-319
               

               
Cow position:
               
chr28:5074729-5074540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
123-278
               

               
Cow position:
               
chr28:2888206-2888360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
125-319
               

               
Cow position:
               
chr28:18625001-18625201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr28:5188622-5188435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 77
               

               
Conread position:
               
127-233
               

               
Cow position:
               
chr28:8628996-8628886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
136-345
               

               
Cow position:
               
chr28:3714591-3714794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
137-319
               

               
Cow position:
               
chr28:9108232-9108416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
141-345
               

               
Cow position:
               
chr28:22739595-22739785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
146-319
               

               
Cow position:
               
chr28:14512325-14512491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
146-337
               

               
Cow position:
               
chr28:25459325-25459515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
152-319
               

               
Cow position:
               
chr28:4881440-4881267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr28:5236115-5236299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
160-319
               

               
Cow position:
               
chr28:3105052-3105220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
161-323
               

               
Cow position:
               
chr28:18760228-18760073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
161-337
               

               
Cow position:
               
chr28:19023947-19024130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
167-333
               

               
Cow position:
               
chr28:25728025-25728182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
175-318
               

               
Cow position:
               
chr28:2752663-2752526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
186-323
               

               
Cow position:
               
chr28:26982899-26982763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
186-337
               

               
Cow position:
               
chr28:118208-118065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
191-319
               

               
Cow position:
               
chr28:30746879-30746759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.