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Cow genome map

           
Conread name:
           
Pig2-13B24
        

               
Conread position:
               
2-229
               

               
Cow position:
               
chr3:57022205-57022428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr3:40101044-40100808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
175, 49
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:41818461-41818228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:50329448-50329211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:60892258-60892496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:3776661-3776904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:75050419-75050195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
194, 121
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:70130193-70129939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:12671068-12670823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:21302804-21302560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr3:47737259-47737017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr3:77276777-77276534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 121
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr3:79690881-79691121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr3:51032972-51033221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr3:75143405-75143156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr3:53538145-53538405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:15685283-15685036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
180, 130
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr3:68291196-68291450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
160, 11
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr3:55107481-55107202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr3:61262448-61262699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr3:72530810-72531092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr3:54789603-54789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr3:14717441-14717714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:1133465-1133170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 77
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:18393755-18393467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:53903816-53904102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 70
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:65236646-65236948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 193
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr3:16004357-16004066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr3:364581-364282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
188, 31
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr3:58383589-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 239
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr3:68146197-68145911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr3:27285856-27286164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:2537884-2538193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
188, 70
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:15955171-15955483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 207
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:20471739-20471433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:8716874-8717186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 121
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:48211136-48211422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:76173035-76172730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
188, 149
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:79220477-79220788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr3:7408111-7408423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
188, 17
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr3:49327574-49327876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr3:50768302-50768617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr3:62826986-62826683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr3:66374956-66375254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 69
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr3:72390710-72391023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:115848-116132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
313, 112
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:14552507-14552815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 20
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:31500982-31501289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 61
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:61278541-61278854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:75710940-75711250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr3:31047315-31047011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 133
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:2630422-2630735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:15057983-15057668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 199
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:22021344-22021034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
188, 45
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:22872425-22872106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 245
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:27544707-27544392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:42177783-42178099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:61539424-61539744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:69962083-69961775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:75051002-75050681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:77271650-77271333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:79592261-79591941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:80581304-80581605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr3:2506852-2506532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 109
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr3:5365312-5365621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr3:15662071-15661756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr3:46350274-46350614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr3:53047014-53046719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:5420236-5419918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
188, 42
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:12255107-12255422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
157, 187
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:14724925-14725247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:15655517-15655204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
180, 84
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:19708470-19708159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:50614272-50614582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 101
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:53588765-53588441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:71231033-71231343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:80053906-80053594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr3:82056481-82056164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr3:174561-174895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr3:26894298-26894609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 70
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr3:39328039-39328341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr3:47284467-47284781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 86
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr3:54434601-54434920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr3:16656839-16656542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr3:31298530-31298205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 82
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr3:45881532-45881851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 237
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr3:59588146-59588467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 245
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr3:59514750-59515053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr3:62999369-62999054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 25
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr3:14626523-14626202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 121
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr3:48252522-48252835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr3:44535133-44534805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 101
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr3:49218680-49218360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 121
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr3:33327321-33327663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
82, 243
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr3:51147037-51146710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:3032028-3032365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:34270561-34270874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 70
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:55010525-55010205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
238, 75
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:82460799-82461139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr3:79208362-79208037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 17
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr3:65968788-65969122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr3:9641175-9641529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
66, 250
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr3:17937224-17936876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 249
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr3:49382579-49382912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 201
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:10346974-10347318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 241
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:35283458-35283125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 76
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:49230642-49230982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 107
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:49650008-49650352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 43
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:61191290-61190960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 179
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:70566111-70565773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 233
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:75479645-75479967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
318, 39
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr3:77496445-77496793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr3:73708686-73709012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr3:81371283-81371613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr3:69895425-69895191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr3:30179712-30180041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr3:20663910-20663569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 204
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr3:79884857-79884550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 118
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr3:58286265-58285962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr3:2903669-2903337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 189
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr3:12712294-12711959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 203
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr3:58350208-58350550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr3:74233839-74234157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 79
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr3:55301120-55300877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
190, 118
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr3:5851297-5851007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 118
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:54782381-54782077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:60597184-60597482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr3:43528607-43528299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 230
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr3:26903747-26904055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 90
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr3:63147529-63147210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 241
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr3:35852839-35852527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr3:26554084-26553756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr3:80082187-80081865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr3:61839921-61840235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr3:4991108-4990886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr3:7338146-7337908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr3:37580693-37580451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr3:74849407-74849171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
173, 117
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr3:24823606-24823847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr3:48370762-48371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr3:75164263-75164040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr3:39554682-39554443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr3:72603981-72604232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
159, 227
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr3:38252626-38252873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
180, 106
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr3:41947483-41947217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
184, 48
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr3:58158821-58158569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
171, 57
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr3:14280475-14280743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 228
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr3:36657142-36656865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 232
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr3:53384652-53384373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 226
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr3:42489684-42489384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr3:68302959-68303251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 233
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr3:48530269-48530569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 94
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr3:20746949-20746654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
48, 226
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr3:79902134-79902434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr3:45523896-45524196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 72
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr3:14263026-14263328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 78
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr3:25690424-25690725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr3:35299305-35299600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr3:67929640-67929327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr3:53593068-53592755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 69
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr3:6442866-6443181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 103
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr3:28675620-28675931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 179
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr3:59630869-59630561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 227
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr3:74088530-74088229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 98
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr3:72675719-72676034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 33
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:18066765-18067079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 230
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:41367352-41367042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 117
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr3:54959829-54960132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 37
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr3:14466073-14465769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr3:49454863-49455183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 234
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr3:69849871-69849561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 225
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr3:6853872-6853559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr3:68586672-68586966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr3:20129578-20129893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr3:29887793-29887478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 231
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr3:1830934-1830610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr3:2035929-2036262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
184, 229
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr3:2674660-2674993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 213
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr3:3164861-3164531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 35
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr3:6689626-6689964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr3:23169439-23169099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 233
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr3:57554214-57553884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr3:59648894-59649222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr3:75727958-75727619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 325
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr3:36672372-36672056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr3:2007906-2008199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr3:74499872-74500177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:33633254-33632952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
173, 99
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr3:2483088-2483387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr3:49461305-49460985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 232
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr3:59001113-59000808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 116
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr3:20802996-20802678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr3:68342623-68342309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 229
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr3:69751069-69750754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 228
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr3:48241253-48241575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr3:80564593-80564931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr3:54340779-54340542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr3:27669907-27670178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr3:31206506-31206797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 33
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr3:55117336-55117035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 70
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chr3:57577333-57577629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr3:28908570-28908265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 199
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr3:66610205-66609898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr3:77226955-77227273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr3:4049836-4050152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 163
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr3:55085557-55085215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 249
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr3:29807097-29807409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr3:62233626-62233398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr3:5101125-5100819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr3:48296346-48296668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr3:58969252-58968968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
11-345
               

               
Cow position:
               
chr3:55190109-55189790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 23
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr3:7566777-7566484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr3:42423698-42423362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 232
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr3:7857990-7858327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
16-259
               

               
Cow position:
               
chr3:59179050-59179296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
17-315
               

               
Cow position:
               
chr3:522367-522643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr3:53270462-53270777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 226
               

               
Conread position:
               
18-240
               

               
Cow position:
               
chr3:78546456-78546225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 78
               

               
Conread position:
               
18-276
               

               
Cow position:
               
chr3:32772879-32773136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr3:13899810-13899505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 231
               

               
Conread position:
               
18-322
               

               
Cow position:
               
chr3:20438018-20437708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr3:31771343-31771634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
185, 98
               

               
Conread position:
               
18-345
               

               
Cow position:
               
chr3:30358991-30358669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 215
               

               
Conread position:
               
18-345
               

               
Cow position:
               
chr3:83816158-83815823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 238
               

               
Conread position:
               
19-345
               

               
Cow position:
               
chr3:53149970-53150289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
20-245
               

               
Cow position:
               
chr3:82165990-82165761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
20-252
               

               
Cow position:
               
chr3:44254790-44254545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr3:52148031-52147748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 88
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr3:4031609-4031911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 221
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr3:72018768-72019054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr3:17952301-17952602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 222
               

               
Conread position:
               
20-345
               

               
Cow position:
               
chr3:8753109-8753424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 102
               

               
Conread position:
               
20-345
               

               
Cow position:
               
chr3:18459875-18459556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 213
               

               
Conread position:
               
20-345
               

               
Cow position:
               
chr3:45312697-45313015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
21-345
               

               
Cow position:
               
chr3:67544228-67543903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 184
               

               
Conread position:
               
22-305
               

               
Cow position:
               
chr3:11640084-11640360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr3:65413640-65413322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr3:470780-470559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
25-312
               

               
Cow position:
               
chr3:12323718-12324008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 80
               

               
Conread position:
               
25-322
               

               
Cow position:
               
chr3:61361067-61361348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
25-323
               

               
Cow position:
               
chr3:65058356-65058646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 14
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr3:41053467-41053663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr3:80973005-80973222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr3:54909217-54909438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr3:66708421-66708110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
27-253
               

               
Cow position:
               
chr3:83698301-83698054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
27-302
               

               
Cow position:
               
chr3:83988136-83988407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 48
               

               
Conread position:
               
27-318
               

               
Cow position:
               
chr3:70895699-70895986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr3:56637311-56637613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 184
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr3:31903456-31903168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr3:15081086-15080879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr3:58206794-58206506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr3:59451250-59451535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
30-334
               

               
Cow position:
               
chr3:17222496-17222192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 212
               

               
Conread position:
               
31-296
               

               
Cow position:
               
chr3:61467273-61467525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
31-306
               

               
Cow position:
               
chr3:58060961-58060680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 231
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr3:79292491-79292775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 56
               

               
Conread position:
               
32-250
               

               
Cow position:
               
chr3:22954192-22953974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
33-319
               

               
Cow position:
               
chr3:13577539-13577248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr3:209980-210275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
33-344
               

               
Cow position:
               
chr3:2393314-2392999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
59, 225
               

               
Conread position:
               
34-302
               

               
Cow position:
               
chr3:48852302-48852037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr3:61857156-61857433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 204
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr3:4222979-4223252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
36-318
               

               
Cow position:
               
chr3:81471436-81471157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
38-234
               

               
Cow position:
               
chr3:48900839-48900639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 113
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr3:76614309-76614517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
41-319
               

               
Cow position:
               
chr3:2015441-2015711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
41-337
               

               
Cow position:
               
chr3:15052276-15051992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
292, 56
               

               
Conread position:
               
42-326
               

               
Cow position:
               
chr3:61171835-61171558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
43-322
               

               
Cow position:
               
chr3:59596873-59597127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
44-345
               

               
Cow position:
               
chr3:59271228-59271507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr3:54903244-54903509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
46-302
               

               
Cow position:
               
chr3:31309691-31309430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 197
               

               
Conread position:
               
46-334
               

               
Cow position:
               
chr3:82657414-82657129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
46-337
               

               
Cow position:
               
chr3:55970178-55970463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 78
               

               
Conread position:
               
47-343
               

               
Cow position:
               
chr3:2397111-2396817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
143, 190
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr3:7678349-7678613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr3:83920874-83921148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
48-339
               

               
Cow position:
               
chr3:73776946-73777245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
49-223
               

               
Cow position:
               
chr3:13350591-13350768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr3:57754798-57754540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr3:2024866-2025126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
133, 187
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr3:67704218-67704486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr3:28898546-28898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr3:64172127-64172395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr3:78200949-78201232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 182
               

               
Conread position:
               
58-343
               

               
Cow position:
               
chr3:53112851-53113137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr3:23476686-23476943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
61-345
               

               
Cow position:
               
chr3:53790858-53790571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
62-335
               

               
Cow position:
               
chr3:54770694-54770967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
62-337
               

               
Cow position:
               
chr3:46161158-46160887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 173
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr3:46900883-46901147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
66-323
               

               
Cow position:
               
chr3:65800286-65800533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr3:35975413-35975172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 173
               

               
Conread position:
               
69-345
               

               
Cow position:
               
chr3:27274233-27274495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
70-345
               

               
Cow position:
               
chr3:49787105-49787378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
72-237
               

               
Cow position:
               
chr3:19198378-19198547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
72-312
               

               
Cow position:
               
chr3:83934211-83934444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr3:2518840-2518593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
118, 167
               

               
Conread position:
               
72-322
               

               
Cow position:
               
chr3:70401600-70401845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
72-345
               

               
Cow position:
               
chr3:18763591-18763860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
114, 160
               

               
Conread position:
               
73-337
               

               
Cow position:
               
chr3:2216058-2216324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
73-344
               

               
Cow position:
               
chr3:62789506-62789212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
75-336
               

               
Cow position:
               
chr3:45647835-45648090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
75-346
               

               
Cow position:
               
chr3:30463466-30463207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
115, 160
               

               
Conread position:
               
78-306
               

               
Cow position:
               
chr3:18854797-18855023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 6
               

               
Conread position:
               
78-319
               

               
Cow position:
               
chr3:71430508-71430266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
78-322
               

               
Cow position:
               
chr3:3985034-3985271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
78-335
               

               
Cow position:
               
chr3:54862722-54862458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr3:70333769-70333554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr3:59392399-59392207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr3:22170899-22171121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
85-319
               

               
Cow position:
               
chr3:30055738-30055506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
86-250
               

               
Cow position:
               
chr3:57982744-57982913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr3:44861597-44861385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 166
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr3:74699684-74699473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
86-303
               

               
Cow position:
               
chr3:63179579-63179787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
86-304
               

               
Cow position:
               
chr3:79148565-79148343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
86-312
               

               
Cow position:
               
chr3:17957178-17957399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr3:8393059-8393289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr3:11949642-11949416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 163
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr3:73956737-73956966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr3:76138201-76138421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr3:78946128-78945894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr3:29360424-29360202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr3:23471757-23471522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 152
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr3:23944810-23945043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr3:66116401-66116166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 162
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr3:58540819-58540579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr3:21081674-21081424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
86-333
               

               
Cow position:
               
chr3:56658-56423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr3:29812955-29813201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr3:68708290-68708048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr3:68881398-68881156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr3:5096914-5097171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr3:19006378-19006622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr3:45647388-45647644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
87-242
               

               
Cow position:
               
chr3:16622316-16622155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
87-242
               

               
Cow position:
               
chr3:70468091-70467937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr3:45333888-45333723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
87-285
               

               
Cow position:
               
chr3:42914165-42914370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
87-302
               

               
Cow position:
               
chr3:51609528-51609745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 152
               

               
Conread position:
               
87-311
               

               
Cow position:
               
chr3:56704825-56704611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr3:25691461-25691698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr3:64281224-64280988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 135
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr3:27532950-27532712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr3:38691692-38691462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr3:44623185-44622940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
87-333
               

               
Cow position:
               
chr3:14602001-14601757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr3:8393651-8393893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr3:34316252-34315999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
103, 163
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr3:53739481-53739229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr3:56059519-56059767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr3:23876710-23876961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr3:39970160-39969899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr3:73759807-73759552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr3:74533060-74533313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
88-242
               

               
Cow position:
               
chr3:33693362-33693523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 142
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr3:36100541-36100776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr3:73443374-73443149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
102, 147
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr3:17895567-17895786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
88-323
               

               
Cow position:
               
chr3:66292465-66292235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
88-326
               

               
Cow position:
               
chr3:72128-72370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
88-331
               

               
Cow position:
               
chr3:23408629-23408399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
88-335
               

               
Cow position:
               
chr3:58174624-58174863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr3:83369036-83369221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
89-300
               

               
Cow position:
               
chr3:33253164-33252955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
89-323
               

               
Cow position:
               
chr3:27546119-27545877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr3:19789404-19789150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 158
               

               
Conread position:
               
91-245
               

               
Cow position:
               
chr3:3096631-3096475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr3:67744912-67744687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
91-328
               

               
Cow position:
               
chr3:52863467-52863234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr3:54945844-54946094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 6
               

               
Conread position:
               
93-286
               

               
Cow position:
               
chr3:18497743-18497929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr3:59208532-59208755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 142
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr3:39171766-39171538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
93-345
               

               
Cow position:
               
chr3:66901024-66900769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 141
               

               
Conread position:
               
95-323
               

               
Cow position:
               
chr3:57624183-57624409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
96-233
               

               
Cow position:
               
chr3:18607089-18607235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr3:16343337-16343483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
96-250
               

               
Cow position:
               
chr3:23477956-23478114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr3:68583281-68583080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
96-318
               

               
Cow position:
               
chr3:32597207-32596987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr3:55124557-55124340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr3:42588070-42588302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr3:44101702-44101916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr3:75158086-75158304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
96-324
               

               
Cow position:
               
chr3:38863834-38864061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr3:73467340-73467570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr3:75570720-75570502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
222, 29
               

               
Conread position:
               
96-329
               

               
Cow position:
               
chr3:57763944-57764177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 225
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr3:77365573-77365344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr3:49731916-49731683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
96-339
               

               
Cow position:
               
chr3:17284557-17284807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
96-340
               

               
Cow position:
               
chr3:49482983-49482744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr3:17456548-17456304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 143
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr3:42483621-42483872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr3:63861180-63860925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
97-331
               

               
Cow position:
               
chr3:5374057-5374285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
97-342
               

               
Cow position:
               
chr3:68627953-68627723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
98-318
               

               
Cow position:
               
chr3:16810068-16809845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 140
               

               
Conread position:
               
98-345
               

               
Cow position:
               
chr3:74409218-74409449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
223, 24
               

               
Conread position:
               
99-311
               

               
Cow position:
               
chr3:8457381-8457587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
99-319
               

               
Cow position:
               
chr3:5899550-5899764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
99-319
               

               
Cow position:
               
chr3:32399531-32399314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
99-322
               

               
Cow position:
               
chr3:6873521-6873302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 137
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr3:73764469-73764242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
100-322
               

               
Cow position:
               
chr3:41718116-41718337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
102-345
               

               
Cow position:
               
chr3:525081-525312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
219, 129
               

               
Conread position:
               
103-324
               

               
Cow position:
               
chr3:51578593-51578375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr3:74611291-74611509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
105-236
               

               
Cow position:
               
chr3:84368639-84368509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
105-312
               

               
Cow position:
               
chr3:13302126-13301914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
105-333
               

               
Cow position:
               
chr3:84000342-84000567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
105-345
               

               
Cow position:
               
chr3:70899630-70899857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
106-233
               

               
Cow position:
               
chr3:17451203-17451068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
107-336
               

               
Cow position:
               
chr3:52650801-52650576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
107-343
               

               
Cow position:
               
chr3:69417056-69416819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
108-255
               

               
Cow position:
               
chr3:7562178-7562029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
108-300
               

               
Cow position:
               
chr3:59701746-59701931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
108-319
               

               
Cow position:
               
chr3:28939182-28938966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
110-311
               

               
Cow position:
               
chr3:23269837-23270031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
112-318
               

               
Cow position:
               
chr3:81401567-81401367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
112-319
               

               
Cow position:
               
chr3:73394853-73395062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
113-229
               

               
Cow position:
               
chr3:9638855-9638736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
113-306
               

               
Cow position:
               
chr3:55970963-55971154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
114-319
               

               
Cow position:
               
chr3:51234357-51234155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
114-322
               

               
Cow position:
               
chr3:73590259-73590055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr3:45307675-45307877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
116-326
               

               
Cow position:
               
chr3:16333547-16333748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
117-300
               

               
Cow position:
               
chr3:23448389-23448216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
117-312
               

               
Cow position:
               
chr3:30009168-30008980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 118
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr3:71237899-71238094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr3:8604272-8604074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
117-322
               

               
Cow position:
               
chr3:28692688-28692489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
117-322
               

               
Cow position:
               
chr3:54881498-54881704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 135
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr3:4087424-4087218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
117-346
               

               
Cow position:
               
chr3:61143835-61144064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
118-319
               

               
Cow position:
               
chr3:22820312-22820509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
118-337
               

               
Cow position:
               
chr3:52652331-52652125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
118-337
               

               
Cow position:
               
chr3:56476425-56476638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
118-345
               

               
Cow position:
               
chr3:8060874-8061093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
118-345
               

               
Cow position:
               
chr3:14633244-14633019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr3:26970570-26970772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
120-335
               

               
Cow position:
               
chr3:23092238-23092021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
120-340
               

               
Cow position:
               
chr3:48578586-48578794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
123-345
               

               
Cow position:
               
chr3:25754784-25754988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
125-326
               

               
Cow position:
               
chr3:18686666-18686855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
125-329
               

               
Cow position:
               
chr3:70334952-70334744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
125-337
               

               
Cow position:
               
chr3:15752878-15752675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
126-345
               

               
Cow position:
               
chr3:16362987-16362771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 58
               

               
Conread position:
               
126-345
               

               
Cow position:
               
chr3:74878838-74878625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
127-316
               

               
Cow position:
               
chr3:63332562-63332756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
127-326
               

               
Cow position:
               
chr3:2680263-2680465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr3:55947327-55947536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr3:44932260-44932479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
129-323
               

               
Cow position:
               
chr3:83201774-83201581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
129-336
               

               
Cow position:
               
chr3:23445136-23444937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
192, 102
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr3:55836075-55835856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
131-300
               

               
Cow position:
               
chr3:35074437-35074605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
135-319
               

               
Cow position:
               
chr3:39661690-39661515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
136-339
               

               
Cow position:
               
chr3:59885134-59885347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
137-319
               

               
Cow position:
               
chr3:4861451-4861624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
137-345
               

               
Cow position:
               
chr3:34937602-34937811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr3:29334751-29334583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
140-336
               

               
Cow position:
               
chr3:11711718-11711920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
141-322
               

               
Cow position:
               
chr3:15192329-15192509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
142-317
               

               
Cow position:
               
chr3:67930411-67930244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
142-345
               

               
Cow position:
               
chr3:55106676-55106475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
143-326
               

               
Cow position:
               
chr3:49140265-49140094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
146-319
               

               
Cow position:
               
chr3:76015070-76015230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr3:23215810-23215634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr3:26960821-26960624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
152-319
               

               
Cow position:
               
chr3:60265459-60265300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
153-322
               

               
Cow position:
               
chr3:2198660-2198827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
153-345
               

               
Cow position:
               
chr3:83215031-83215226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr3:83691942-83691779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
159-337
               

               
Cow position:
               
chr3:63269013-63269179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
160-322
               

               
Cow position:
               
chr3:76713537-76713380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
161-345
               

               
Cow position:
               
chr3:3062348-3062532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
163-337
               

               
Cow position:
               
chr3:55319110-55318944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr3:78896444-78896603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
175-324
               

               
Cow position:
               
chr3:61024499-61024357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
175-337
               

               
Cow position:
               
chr3:15859862-15859710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
181-317
               

               
Cow position:
               
chr3:13890277-13890414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
182-339
               

               
Cow position:
               
chr3:55819558-55819712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
186-319
               

               
Cow position:
               
chr3:3638001-3638128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
186-322
               

               
Cow position:
               
chr3:55712244-55712375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
186-337
               

               
Cow position:
               
chr3:66884126-66883984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
186-345
               

               
Cow position:
               
chr3:27697164-27697014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
188-318
               

               
Cow position:
               
chr3:81359297-81359167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
189-321
               

               
Cow position:
               
chr3:26739602-26739473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
190-322
               

               
Cow position:
               
chr3:26981883-26982009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
209-319
               

               
Cow position:
               
chr3:59884235-59884131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               
Show alignments to all cow chromosomes.