Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-119 |
| Cow position: | chr15:3726238-3726120 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 1-122 |
| Cow position: | chr15:40594391-40594512 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 1-122 |
| Cow position: | chr15:49257977-49257857 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 1-123 |
| Cow position: | chr15:9879263-9879386 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-123 |
| Cow position: | chr15:24982064-24982187 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 1-123 |
| Cow position: | chr15:42789033-42789156 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 2-118 |
| Cow position: | chr15:23568014-23568130 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr15:4694856-4694739 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 2-119 |
| Cow position: | chr15:47042516-47042635 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-123 |
| Cow position: | chr15:244894-244773 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:6905189-6905069 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:8354154-8354033 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:14988102-14987982 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 2-123 |
| Cow position: | chr15:16307535-16307414 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:17870169-17870292 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 2-123 |
| Cow position: | chr15:21903297-21903418 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:25907020-25906899 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:26851113-26851238 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 2-123 |
| Cow position: | chr15:27063408-27063529 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:30047433-30047554 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 2-123 |
| Cow position: | chr15:30986182-30986303 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:33306222-33306102 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr15:33643203-33643080 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-123 |
| Cow position: | chr15:36259491-36259612 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:36353781-36353660 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:39598355-39598234 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 2-123 |
| Cow position: | chr15:41056091-41056212 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 2-123 |
| Cow position: | chr15:44237530-44237409 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 2-123 |
| Cow position: | chr15:46563372-46563492 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr15:46868602-46868722 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 2-123 |
| Cow position: | chr15:47843980-47844101 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 3-108 |
| Cow position: | chr15:13515478-13515373 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 3-119 |
| Cow position: | chr15:26442327-26442211 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 3-123 |
| Cow position: | chr15:26718811-26718928 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-123 |
| Cow position: | chr15:40415527-40415648 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 4-119 |
| Cow position: | chr15:36887946-36887833 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 4-122 |
| Cow position: | chr15:11912448-11912563 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 4-123 |
| Cow position: | chr15:10563392-10563510 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 4-123 |
| Cow position: | chr15:16908544-16908425 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 4-123 |
| Cow position: | chr15:37284564-37284445 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 5-119 |
| Cow position: | chr15:30470862-30470976 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 5-119 |
| Cow position: | chr15:50333090-50332977 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 11-123 |
| Cow position: | chr15:23275646-23275534 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 13-123 |
| Cow position: | chr15:20391174-20391283 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 23-123 |
| Cow position: | chr15:34223957-34223858 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 24-123 |
| Cow position: | chr15:30795067-30794972 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 28-122 |
| Cow position: | chr15:48326145-48326238 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 31-123 |
| Cow position: | chr15:28099195-28099104 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.