Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-122 |
| Cow position: | chr17:22051577-22051453 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 1-123 |
| Cow position: | chr17:24554013-24554134 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 2-119 |
| Cow position: | chr17:1040762-1040879 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr17:18848141-18848024 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-119 |
| Cow position: | chr17:21039574-21039691 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr17:21114937-21114820 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr17:24973958-24974079 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-119 |
| Cow position: | chr17:29076066-29075949 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 2-119 |
| Cow position: | chr17:35338903-35338787 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 2-122 |
| Cow position: | chr17:11664568-11664446 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 2-123 |
| Cow position: | chr17:908758-908878 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-123 |
| Cow position: | chr17:1410221-1410100 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:5423052-5422931 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:6318849-6318729 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr17:7810738-7810617 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:9932283-9932162 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:12325748-12325627 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:12536448-12536327 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:12591186-12591312 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 2-123 |
| Cow position: | chr17:15102877-15102756 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:17034966-17035087 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:17406152-17406273 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 2-123 |
| Cow position: | chr17:24587641-24587762 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:25511263-25511382 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-123 |
| Cow position: | chr17:25514105-25513985 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 2-123 |
| Cow position: | chr17:25612107-25612228 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:25800865-25800745 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 2-123 |
| Cow position: | chr17:25901217-25901338 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:29084191-29084312 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 2-123 |
| Cow position: | chr17:31037360-31037239 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:32138407-32138286 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr17:32419099-32418978 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 2-123 |
| Cow position: | chr17:32471764-32471643 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 2-123 |
| Cow position: | chr17:33793183-33793301 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 2-123 |
| Cow position: | chr17:33933728-33933605 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-123 |
| Cow position: | chr17:40331785-40331902 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-123 |
| Cow position: | chr17:3153556-3153437 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 3-123 |
| Cow position: | chr17:5372509-5372389 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:5767925-5768042 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 3-123 |
| Cow position: | chr17:11912485-11912365 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:24824260-24824380 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:25473262-25473142 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:30728522-30728642 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:32989495-32989614 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-123 |
| Cow position: | chr17:32993605-32993486 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-123 |
| Cow position: | chr17:39606448-39606568 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr17:39736194-39736312 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 4-123 |
| Cow position: | chr17:11368830-11368712 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 83 |
| Conread position: | 4-123 |
| Cow position: | chr17:29157438-29157554 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 5-123 |
| Cow position: | chr17:15340734-15340614 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 6-123 |
| Cow position: | chr17:1634471-1634354 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 6-123 |
| Cow position: | chr17:11478790-11478907 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 7-118 |
| Cow position: | chr17:6423786-6423897 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 10-123 |
| Cow position: | chr17:32333066-32332953 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 12-119 |
| Cow position: | chr17:17044304-17044198 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 12-119 |
| Cow position: | chr17:21466235-21466129 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 12-123 |
| Cow position: | chr17:12959133-12959244 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 12-123 |
| Cow position: | chr17:34791037-34790926 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 13-123 |
| Cow position: | chr17:9824697-9824807 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 13-123 |
| Cow position: | chr17:23101191-23101081 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 13-123 |
| Cow position: | chr17:35573780-35573890 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 19-117 |
| Cow position: | chr17:9713307-9713210 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-123 |
| Cow position: | chr17:40412618-40412721 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.