Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-119 |
| Cow position: | chr19:21378504-21378387 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 1-119 |
| Cow position: | chr19:47453397-47453514 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 1-123 |
| Cow position: | chr19:5656159-5656038 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-123 |
| Cow position: | chr19:8332264-8332386 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 1-123 |
| Cow position: | chr19:28135527-28135648 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 2-113 |
| Cow position: | chr19:38732104-38732215 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 2-118 |
| Cow position: | chr19:45396553-45396436 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 2-119 |
| Cow position: | chr19:14593021-14593138 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 2-119 |
| Cow position: | chr19:25628171-25628054 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 2-120 |
| Cow position: | chr19:11212433-11212315 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-122 |
| Cow position: | chr19:11560076-11559953 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-122 |
| Cow position: | chr19:18786356-18786237 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 2-122 |
| Cow position: | chr19:52479952-52480070 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 2-123 |
| Cow position: | chr19:3621395-3621515 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:5115914-5115793 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:10238702-10238823 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 2-123 |
| Cow position: | chr19:10930451-10930332 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 2-123 |
| Cow position: | chr19:12705873-12705752 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:16105115-16104994 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:18054291-18054170 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:20670941-20670820 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:21199104-21199225 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:22043387-22043270 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 2-123 |
| Cow position: | chr19:23087949-23088070 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 2-123 |
| Cow position: | chr19:23756777-23756656 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:23889522-23889401 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:24253334-24253213 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 2-123 |
| Cow position: | chr19:25035446-25035565 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 2-123 |
| Cow position: | chr19:25726916-25726795 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:28810352-28810230 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-123 |
| Cow position: | chr19:33913492-33913613 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:34758037-34757916 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:37633260-37633139 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 2-123 |
| Cow position: | chr19:39060728-39060611 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 2-123 |
| Cow position: | chr19:39576603-39576482 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:42517290-42517169 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr19:47671709-47671830 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 3-114 |
| Cow position: | chr19:18892151-18892040 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-119 |
| Cow position: | chr19:10213638-10213754 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr19:23378642-23378762 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 3-123 |
| Cow position: | chr19:49221655-49221535 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 4-122 |
| Cow position: | chr19:9541932-9541814 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 4-123 |
| Cow position: | chr19:34620061-34619943 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 4-123 |
| Cow position: | chr19:42903978-42904095 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 5-119 |
| Cow position: | chr19:41584937-41585051 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 5-123 |
| Cow position: | chr19:10538583-10538465 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 7-123 |
| Cow position: | chr19:24062247-24062363 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 11-123 |
| Cow position: | chr19:25763088-25763197 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 13-123 |
| Cow position: | chr19:22765599-22765707 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 53 |
| Conread position: | 19-122 |
| Cow position: | chr19:11646550-11646652 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-123 |
| Cow position: | chr19:24692991-24693094 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 19-123 |
| Cow position: | chr19:25832216-25832113 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 23-123 |
| Cow position: | chr19:38723737-38723638 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 24-119 |
| Cow position: | chr19:36059926-36060020 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 32-123 |
| Cow position: | chr19:26269238-26269148 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.