Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-123 |
| Cow position: | chr21:802278-802156 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 1-123 |
| Cow position: | chr21:32559324-32559204 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-123 |
| Cow position: | chr21:34654113-34654234 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 2-115 |
| Cow position: | chr21:641627-641740 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-115 |
| Cow position: | chr21:12104405-12104519 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 2-117 |
| Cow position: | chr21:20260279-20260164 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-119 |
| Cow position: | chr21:11057838-11057724 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 2-119 |
| Cow position: | chr21:39393788-39393906 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-119 |
| Cow position: | chr21:45262770-45262653 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-120 |
| Cow position: | chr21:21615822-21615940 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-121 |
| Cow position: | chr21:7088640-7088759 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr21:71627-71747 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr21:643365-643485 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr21:9990551-9990671 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr21:12801709-12801586 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 2-123 |
| Cow position: | chr21:19868914-19868794 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-123 |
| Cow position: | chr21:20163748-20163869 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr21:24598698-24598819 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 2-123 |
| Cow position: | chr21:29069287-29069165 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 2-123 |
| Cow position: | chr21:30222385-30222506 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr21:30980537-30980417 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 2-123 |
| Cow position: | chr21:36682365-36682486 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 2-123 |
| Cow position: | chr21:44214167-44214287 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 2-123 |
| Cow position: | chr21:46264212-46264331 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-123 |
| Cow position: | chr21:46451912-46451793 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 2-123 |
| Cow position: | chr21:47719259-47719141 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 3-107 |
| Cow position: | chr21:297795-297899 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 3-117 |
| Cow position: | chr21:36297534-36297648 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 3-118 |
| Cow position: | chr21:22850963-22851076 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-119 |
| Cow position: | chr21:42135575-42135459 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 3-122 |
| Cow position: | chr21:6851213-6851332 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 3-123 |
| Cow position: | chr21:31147893-31147774 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-123 |
| Cow position: | chr21:38121142-38121262 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr21:42540181-42540060 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 4-119 |
| Cow position: | chr21:24875394-24875510 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 4-119 |
| Cow position: | chr21:25764678-25764792 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 4-122 |
| Cow position: | chr21:724842-724719 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 4-123 |
| Cow position: | chr21:5392494-5392374 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 4-123 |
| Cow position: | chr21:17252936-17252818 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 5-119 |
| Cow position: | chr21:37299505-37299619 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 5-123 |
| Cow position: | chr21:5342051-5341933 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 6-122 |
| Cow position: | chr21:28191078-28191192 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 9-122 |
| Cow position: | chr21:30243634-30243521 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 11-123 |
| Cow position: | chr21:8426495-8426607 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 11-123 |
| Cow position: | chr21:19360127-19360015 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 19-123 |
| Cow position: | chr21:15012497-15012600 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 19-123 |
| Cow position: | chr21:20183129-20183232 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-123 |
| Cow position: | chr21:25012140-25012242 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.