Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-123 |
| Cow position: | chr23:1403828-1403706 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 1-123 |
| Cow position: | chr23:10497678-10497797 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 1-123 |
| Cow position: | chr23:35369068-35368947 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 2-115 |
| Cow position: | chr23:2501875-2501762 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-116 |
| Cow position: | chr23:32411891-32412006 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 2-117 |
| Cow position: | chr23:5785823-5785938 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-117 |
| Cow position: | chr23:39778380-39778495 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-118 |
| Cow position: | chr23:385330-385217 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-118 |
| Cow position: | chr23:1883373-1883490 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 2-118 |
| Cow position: | chr23:16881184-16881068 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-118 |
| Cow position: | chr23:20744614-20744498 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr23:3293674-3293791 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 2-119 |
| Cow position: | chr23:3830220-3830104 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 2-119 |
| Cow position: | chr23:22238843-22238726 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-122 |
| Cow position: | chr23:1290277-1290396 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-122 |
| Cow position: | chr23:1438270-1438391 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 2-122 |
| Cow position: | chr23:24685223-24685343 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:534209-534327 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 2-123 |
| Cow position: | chr23:2799559-2799680 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:3282143-3282022 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:3814302-3814181 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:5706972-5707093 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:7361085-7361207 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 2-123 |
| Cow position: | chr23:7709769-7709890 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:7845272-7845393 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:8063523-8063643 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:13202379-13202259 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:16961276-16961397 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:24966484-24966363 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 2-123 |
| Cow position: | chr23:26986292-26986172 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 2-123 |
| Cow position: | chr23:29459120-29458999 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr23:33717560-33717442 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-123 |
| Cow position: | chr23:40637237-40637357 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 3-112 |
| Cow position: | chr23:21452750-21452641 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 3-119 |
| Cow position: | chr23:9268563-9268675 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 3-119 |
| Cow position: | chr23:35965126-35965242 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-122 |
| Cow position: | chr23:12363638-12363519 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 3-123 |
| Cow position: | chr23:1589568-1589689 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 3-123 |
| Cow position: | chr23:8698400-8698520 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr23:11315055-11314934 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 3-123 |
| Cow position: | chr23:17404819-17404938 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 3-123 |
| Cow position: | chr23:24867289-24867409 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 4-119 |
| Cow position: | chr23:4470518-4470404 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 4-123 |
| Cow position: | chr23:24926795-24926913 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 5-122 |
| Cow position: | chr23:1760864-1760747 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 5-123 |
| Cow position: | chr23:5732533-5732650 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 6-123 |
| Cow position: | chr23:5426416-5426533 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 10-119 |
| Cow position: | chr23:1876698-1876807 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 11-119 |
| Cow position: | chr23:1981671-1981566 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 11-119 |
| Cow position: | chr23:22668517-22668409 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 76 |
| Conread position: | 11-123 |
| Cow position: | chr23:1194504-1194392 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 11-123 |
| Cow position: | chr23:5881530-5881418 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 11-123 |
| Cow position: | chr23:17597414-17597526 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 12-123 |
| Cow position: | chr23:348959-348848 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 19-123 |
| Cow position: | chr23:18605410-18605308 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 23-123 |
| Cow position: | chr23:27848997-27849096 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.