Cow genome map
| Conread name: | Pig2-14D02 |
| Conread position: | 1-118 |
| Cow position: | chr28:2762176-2762292 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 1-123 |
| Cow position: | chr28:4158935-4159057 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 1-123 |
| Cow position: | chr28:7619170-7619048 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 1-123 |
| Cow position: | chr28:10775732-10775609 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 1-123 |
| Cow position: | chr28:16919188-16919067 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-123 |
| Cow position: | chr28:21844939-21845059 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 2-111 |
| Cow position: | chr28:3023932-3023823 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 2-118 |
| Cow position: | chr28:16204353-16204237 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 2-119 |
| Cow position: | chr28:3445499-3445384 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 2-119 |
| Cow position: | chr28:4809760-4809877 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr28:5205252-5205369 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 2-119 |
| Cow position: | chr28:11816685-11816568 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-119 |
| Cow position: | chr28:12070219-12070329 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-120 |
| Cow position: | chr28:4361467-4361349 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-121 |
| Cow position: | chr28:7350635-7350754 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-122 |
| Cow position: | chr28:8022121-8022002 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 2-123 |
| Cow position: | chr28:2960850-2960728 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 2-123 |
| Cow position: | chr28:3492802-3492682 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 2-123 |
| Cow position: | chr28:3740857-3740978 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:3914697-3914819 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 2-123 |
| Cow position: | chr28:4181982-4182103 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:5204176-5204297 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 2-123 |
| Cow position: | chr28:5254855-5254976 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 2-123 |
| Cow position: | chr28:8304228-8304349 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 2-123 |
| Cow position: | chr28:9636476-9636355 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:10589040-10588920 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:11527277-11527157 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 2-123 |
| Cow position: | chr28:11585221-11585100 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:16370102-16369981 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:21868438-21868559 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:24082251-24082372 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 2-123 |
| Cow position: | chr28:26614854-26614975 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 3-119 |
| Cow position: | chr28:3147463-3147577 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 3-122 |
| Cow position: | chr28:10964404-10964520 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 3-123 |
| Cow position: | chr28:777657-777778 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr28:2131942-2131822 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr28:7498165-7498045 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-123 |
| Cow position: | chr28:10172434-10172315 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 3-123 |
| Cow position: | chr28:12964552-12964669 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 4-117 |
| Cow position: | chr28:10977824-10977938 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 4-123 |
| Cow position: | chr28:2862851-2862970 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 4-123 |
| Cow position: | chr28:4013067-4013186 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 4-123 |
| Cow position: | chr28:4016514-4016633 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 5-123 |
| Cow position: | chr28:22813246-22813360 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 6-119 |
| Cow position: | chr28:29850830-29850717 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 8-123 |
| Cow position: | chr28:11426554-11426439 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 8-123 |
| Cow position: | chr28:22148028-22147912 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 11-123 |
| Cow position: | chr28:13474290-13474402 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 12-123 |
| Cow position: | chr28:8396326-8396437 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 12-123 |
| Cow position: | chr28:9684343-9684232 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 13-117 |
| Cow position: | chr28:11884529-11884425 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 16-123 |
| Cow position: | chr28:4248655-4248550 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 19-123 |
| Cow position: | chr28:16879572-16879675 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-123 |
| Cow position: | chr28:25675506-25675403 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-123 |
| Cow position: | chr28:30902125-30902228 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 20-122 |
| Cow position: | chr28:4876443-4876543 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 20-123 |
| Cow position: | chr28:7557734-7557632 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 22-123 |
| Cow position: | chr28:4051200-4051300 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 26-119 |
| Cow position: | chr28:9109222-9109314 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.