Cow genome map

Conread name: Pig2-33D08

Conread position: 5-367
Cow position: chr11:21471840-21471487 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 37

Conread position: 7-358
Cow position: chr11:53855744-53855404 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 25

Conread position: 7-359
Cow position: chr11:12010286-12009945 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 165, 37

Conread position: 7-367
Cow position: chr11:27833536-27833899 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 96

Conread position: 7-367
Cow position: chr11:80471719-80472099 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 36

Conread position: 7-369
Cow position: chr11:76767630-76767274 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 7-371
Cow position: chr11:3796432-3796091 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 7-371
Cow position: chr11:39151818-39151452 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 240

Conread position: 7-374
Cow position: chr11:46583195-46583557 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 7-374
Cow position: chr11:57754005-57754367 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 7-374
Cow position: chr11:60824988-60824625 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 7-374
Cow position: chr11:83001247-83000880 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 240

Conread position: 8-295
Cow position: chr11:42793720-42794009 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 8-300
Cow position: chr11:38638112-38638398 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 59

Conread position: 8-307
Cow position: chr11:53772884-53772603 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 82

Conread position: 8-310
Cow position: chr11:1625949-1626237 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 28

Conread position: 8-310
Cow position: chr11:3230537-3230241 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 225

Conread position: 8-310
Cow position: chr11:12112147-12111844 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 158

Conread position: 8-314
Cow position: chr11:47757767-47758075 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 8-351
Cow position: chr11:69403004-69403347 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 239

Conread position: 8-353
Cow position: chr11:38069516-38069167 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 153

Conread position: 8-359
Cow position: chr11:34297696-34297355 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 20

Conread position: 8-359
Cow position: chr11:48167864-48168207 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 167

Conread position: 8-360
Cow position: chr11:10365185-10365525 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 84

Conread position: 8-360
Cow position: chr11:19507544-19507195 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 200

Conread position: 8-360
Cow position: chr11:21728803-21729155 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 8-360
Cow position: chr11:49935531-49935883 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 8-361
Cow position: chr11:4060736-4061075 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 167

Conread position: 8-361
Cow position: chr11:58399544-58399196 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 136

Conread position: 8-367
Cow position: chr11:59872028-59871674 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 136

Conread position: 8-367
Cow position: chr11:84774380-84774023 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 8-369
Cow position: chr11:67347904-67348259 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 8-371
Cow position: chr11:7719298-7719661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 232

Conread position: 8-371
Cow position: chr11:9153690-9154042 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 71

Conread position: 8-371
Cow position: chr11:11592199-11591832 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 236

Conread position: 8-371
Cow position: chr11:16229434-16229793 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 8-371
Cow position: chr11:23494969-23494605 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 134

Conread position: 8-371
Cow position: chr11:27660454-27660088 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 8-371
Cow position: chr11:31836401-31836044 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 232

Conread position: 8-371
Cow position: chr11:31929654-31929304 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 56

Conread position: 8-371
Cow position: chr11:38641157-38640805 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 6, 45

Conread position: 8-371
Cow position: chr11:41106181-41106533 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 17

Conread position: 8-371
Cow position: chr11:43361515-43361865 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 94

Conread position: 8-371
Cow position: chr11:49171283-49171644 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 8-372
Cow position: chr11:8844394-8844030 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 8-372
Cow position: chr11:25336355-25335993 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 8-373
Cow position: chr11:21896486-21896843 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 8-373
Cow position: chr11:33001088-33000732 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 120

Conread position: 8-373
Cow position: chr11:37279364-37279722 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 238

Conread position: 8-373
Cow position: chr11:59368818-59369183 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 236

Conread position: 8-373
Cow position: chr11:67744598-67744239 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 8-374
Cow position: chr11:8829567-8829917 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 8-374
Cow position: chr11:9388553-9388188 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 240

Conread position: 8-374
Cow position: chr11:25564964-25564604 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 14

Conread position: 8-374
Cow position: chr11:47972635-47973001 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 8-379
Cow position: chr11:36930317-36930683 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 206

Conread position: 9-365
Cow position: chr11:12762970-12763329 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 96

Conread position: 10-365
Cow position: chr11:30057414-30057067 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 118

Conread position: 10-367
Cow position: chr11:33733375-33733720 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 24

Conread position: 10-367
Cow position: chr11:75354421-75354061 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 10-371
Cow position: chr11:5584229-5584582 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 199

Conread position: 10-374
Cow position: chr11:1492653-1492997 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 36

Conread position: 10-374
Cow position: chr11:13087452-13087816 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 10-374
Cow position: chr11:30200483-30200842 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 194

Conread position: 10-374
Cow position: chr11:62792109-62791746 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 108

Conread position: 11-359
Cow position: chr11:84967322-84966974 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 236

Conread position: 11-374
Cow position: chr11:6343673-6343311 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 236

Conread position: 11-374
Cow position: chr11:17549372-17549009 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 236

Conread position: 11-374
Cow position: chr11:28125727-28125366 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 143

Conread position: 11-374
Cow position: chr11:38574271-38574634 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 236

Conread position: 11-374
Cow position: chr11:50510459-50510821 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 235

Conread position: 11-374
Cow position: chr11:67453867-67453506 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 11-374
Cow position: chr11:75402311-75402656 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 17

Conread position: 12-367
Cow position: chr11:75510986-75511333 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 9

Conread position: 12-371
Cow position: chr11:11991212-11990852 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 237

Conread position: 12-377
Cow position: chr11:18105470-18105839 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 181

Conread position: 14-364
Cow position: chr11:7681167-7680824 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 29

Conread position: 14-367
Cow position: chr11:73513160-73513514 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 14-371
Cow position: chr11:10094079-10093730 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 14-371
Cow position: chr11:14259751-14260103 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 14-376
Cow position: chr11:7704894-7704545 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 29

Conread position: 15-371
Cow position: chr11:4675426-4675761 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 297, 31

Conread position: 15-374
Cow position: chr11:25759951-25759604 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 98

Conread position: 16-300
Cow position: chr11:2801051-2801332 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 230

Conread position: 16-301
Cow position: chr11:74389407-74389125 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 230

Conread position: 16-310
Cow position: chr11:23904490-23904199 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 156, 230

Conread position: 16-310
Cow position: chr11:38235561-38235852 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 16-310
Cow position: chr11:67746619-67746330 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 26

Conread position: 16-310
Cow position: chr11:77033884-77034175 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-315
Cow position: chr11:30088084-30087788 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 156, 230

Conread position: 16-315
Cow position: chr11:44870727-44870438 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 29

Conread position: 16-315
Cow position: chr11:75256398-75256102 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 230

Conread position: 16-319
Cow position: chr11:61131745-61132045 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 156, 230

Conread position: 16-334
Cow position: chr11:4734491-4734174 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 156, 230

Conread position: 16-338
Cow position: chr11:2293852-2294173 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 156, 227

Conread position: 16-348
Cow position: chr11:32762659-32762329 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 51

Conread position: 16-355
Cow position: chr11:31834053-31834391 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 232

Conread position: 16-359
Cow position: chr11:61397413-61397755 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 49, 53

Conread position: 16-359
Cow position: chr11:67920134-67920472 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 128

Conread position: 16-360
Cow position: chr11:23883555-23883212 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-360
Cow position: chr11:51034484-51034141 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-360
Cow position: chr11:80591565-80591228 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 196

Conread position: 16-361
Cow position: chr11:2835469-2835128 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 16-365
Cow position: chr11:8018965-8018625 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 65

Conread position: 16-366
Cow position: chr11:10851321-10850973 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 114

Conread position: 16-367
Cow position: chr11:4053153-4053477 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 303, 31

Conread position: 16-367
Cow position: chr11:5482238-5482588 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-367
Cow position: chr11:15047667-15047317 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-367
Cow position: chr11:40487361-40487015 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 16-367
Cow position: chr11:77749259-77748924 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 113

Conread position: 16-370
Cow position: chr11:18920390-18920731 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 16-370
Cow position: chr11:67295799-67296152 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 227

Conread position: 16-371
Cow position: chr11:1504788-1505143 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 206

Conread position: 16-371
Cow position: chr11:4024147-4024495 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 129

Conread position: 16-371
Cow position: chr11:4266947-4267301 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:5273366-5273720 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:7229568-7229214 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:12353684-12354038 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:17279397-17279732 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 169

Conread position: 16-371
Cow position: chr11:19099277-19099631 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 227

Conread position: 16-371
Cow position: chr11:26550684-26550331 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 231

Conread position: 16-371
Cow position: chr11:29662855-29663196 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 51

Conread position: 16-371
Cow position: chr11:30700702-30700348 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 230

Conread position: 16-371
Cow position: chr11:32077575-32077928 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:33601431-33601773 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 107

Conread position: 16-371
Cow position: chr11:35738136-35738488 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 228

Conread position: 16-371
Cow position: chr11:41093654-41094008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 115

Conread position: 16-371
Cow position: chr11:41167486-41167840 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:43510767-43511121 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr11:44153875-44154224 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 16-371
Cow position: chr11:44255279-44254928 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 32

Conread position: 16-371
Cow position: chr11:44580026-44580379 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 187

Conread position: 16-371
Cow position: chr11:63479058-63478705 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 16-371
Cow position: chr11:65282218-65281873 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 229

Conread position: 16-371
Cow position: chr11:67848764-67849126 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-371
Cow position: chr11:70030627-70030275 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 16-371
Cow position: chr11:74929004-74928657 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 164

Conread position: 16-371
Cow position: chr11:86579134-86578778 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 133

Conread position: 16-372
Cow position: chr11:38832271-38832624 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 230

Conread position: 16-373
Cow position: chr11:27938798-27938462 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 27

Conread position: 16-373
Cow position: chr11:31865844-31865485 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 124

Conread position: 16-373
Cow position: chr11:40402566-40402903 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 26

Conread position: 16-374
Cow position: chr11:2285921-2285564 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:3238510-3238152 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 231

Conread position: 16-374
Cow position: chr11:3496251-3495894 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:7120741-7121112 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 244

Conread position: 16-374
Cow position: chr11:8366768-8366411 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 223

Conread position: 16-374
Cow position: chr11:8443783-8444136 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 119

Conread position: 16-374
Cow position: chr11:10698538-10698895 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:10871617-10871974 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:11315621-11315981 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:12178296-12177939 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 226

Conread position: 16-374
Cow position: chr11:15495596-15495239 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:15836120-15835763 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 196

Conread position: 16-374
Cow position: chr11:16547742-16548099 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chr11:17854302-17853945 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:19060866-19061223 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:20285410-20285767 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:20731015-20731371 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 51

Conread position: 16-374
Cow position: chr11:21620349-21619991 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 231

Conread position: 16-374
Cow position: chr11:22617738-22618095 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:24333785-24334142 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:24493600-24493957 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:26592569-26592926 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 230

Conread position: 16-374
Cow position: chr11:27724693-27725050 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:28226570-28226928 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chr11:30255646-30255284 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 240

Conread position: 16-374
Cow position: chr11:30777171-30776814 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:30929590-30929233 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:32455262-32454905 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chr11:32875735-32876092 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:34638296-34638653 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:35142124-35142481 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:35541862-35542217 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 113

Conread position: 16-374
Cow position: chr11:38505023-38505380 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 85

Conread position: 16-374
Cow position: chr11:38599506-38599863 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:41260720-41261077 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:41314503-41314147 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 195

Conread position: 16-374
Cow position: chr11:52846683-52846325 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:54302745-54302388 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:56463570-56463213 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 15

Conread position: 16-374
Cow position: chr11:57624982-57625338 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:58136925-58136568 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 230

Conread position: 16-374
Cow position: chr11:62009593-62009951 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:63390274-63390628 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:63860436-63860792 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 226

Conread position: 16-374
Cow position: chr11:65760399-65760755 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 164

Conread position: 16-374
Cow position: chr11:66389807-66390156 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 67

Conread position: 16-374
Cow position: chr11:72369262-72368904 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr11:73137786-73137442 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 69

Conread position: 16-374
Cow position: chr11:73798494-73798847 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 101

Conread position: 16-374
Cow position: chr11:74990828-74990471 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr11:75711045-75711402 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chr11:80789182-80789542 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 231

Conread position: 16-376
Cow position: chr11:417265-417625 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 63

Conread position: 17-310
Cow position: chr11:43917641-43917351 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 104

Conread position: 17-369
Cow position: chr11:25808539-25808891 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 17-373
Cow position: chr11:83285088-83284745 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 179

Conread position: 18-368
Cow position: chr11:85390656-85390994 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 203

Conread position: 18-369
Cow position: chr11:58804618-58804964 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 45

Conread position: 18-371
Cow position: chr11:46780864-46781214 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 129

Conread position: 18-371
Cow position: chr11:53428817-53429168 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 99

Conread position: 18-371
Cow position: chr11:56652037-56652385 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 24

Conread position: 18-371
Cow position: chr11:77746000-77746352 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 224

Conread position: 18-372
Cow position: chr11:71332705-71332354 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 69

Conread position: 18-374
Cow position: chr11:26121714-26122069 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 228

Conread position: 19-369
Cow position: chr11:67740821-67741170 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 228
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 43

Conread position: 19-371
Cow position: chr11:26067906-26068265 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 19-374
Cow position: chr11:15988493-15988139 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 20-370
Cow position: chr11:26482776-26482427 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 21-371
Cow position: chr11:17980094-17980438 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 22-360
Cow position: chr11:3999299-3999625 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 128

Conread position: 23-338
Cow position: chr11:32956630-32956925 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 148, 19

Conread position: 23-367
Cow position: chr11:11257246-11256925 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 293, 22

Conread position: 23-367
Cow position: chr11:76960648-76960320 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 104

Conread position: 23-369
Cow position: chr11:4206372-4206036 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 23-371
Cow position: chr11:12316869-12317216 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 223

Conread position: 23-371
Cow position: chr11:35241678-35242015 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 62

Conread position: 23-371
Cow position: chr11:49550817-49551162 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 20

Conread position: 24-360
Cow position: chr11:45155547-45155882 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 124

Conread position: 24-364
Cow position: chr11:40458376-40458036 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 138

Conread position: 24-367
Cow position: chr11:30164770-30164430 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 25-367
Cow position: chr11:259945-260290 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 66

Conread position: 26-365
Cow position: chr11:15995691-15995346 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 8

Conread position: 26-373
Cow position: chr11:9870698-9870359 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 146, 171

Conread position: 28-331
Cow position: chr11:46412830-46412528 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 14

Conread position: 28-352
Cow position: chr11:21853056-21853378 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 15

Conread position: 28-365
Cow position: chr11:42358385-42358062 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 282, 13

Conread position: 28-371
Cow position: chr11:17832009-17832339 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 96

Conread position: 29-374
Cow position: chr11:84532072-84532410 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 30-367
Cow position: chr11:67599763-67599437 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 114, 13

Conread position: 31-367
Cow position: chr11:28692780-28693112 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 115

Conread position: 32-355
Cow position: chr11:3681653-3681972 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 141, 156

Conread position: 32-371
Cow position: chr11:58049736-58050071 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 12

Conread position: 33-374
Cow position: chr11:41102102-41101768 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 146, 9

Conread position: 34-352
Cow position: chr11:2567485-2567810 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 136

Conread position: 35-315
Cow position: chr11:30194666-30194397 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 111

Conread position: 35-370
Cow position: chr11:17781842-17782172 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 36-367
Cow position: chr11:59623404-59623736 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 7

Conread position: 36-374
Cow position: chr11:9708335-9707999 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 37-310
Cow position: chr11:33687867-33688127 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 6

Conread position: 37-372
Cow position: chr11:18146357-18146692 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 39-310
Cow position: chr11:82345949-82346208 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 135, 27

Conread position: 42-314
Cow position: chr11:32108948-32108686 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 88

Conread position: 43-310
Cow position: chr11:21371900-21372164 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 26

Conread position: 44-315
Cow position: chr11:16118768-16119030 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 131, 78

Conread position: 44-374
Cow position: chr11:10959009-10958681 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 202

Conread position: 48-374
Cow position: chr11:17997758-17998082 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 191

Conread position: 49-374
Cow position: chr11:28631708-28631384 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 197

Conread position: 53-371
Cow position: chr11:22933456-22933769 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 159

Conread position: 55-374
Cow position: chr11:54728632-54728315 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 198

Conread position: 56-349
Cow position: chr11:49411391-49411678 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 117, 181

Conread position: 56-360
Cow position: chr11:68130569-68130276 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 41

Conread position: 65-369
Cow position: chr11:50950109-50949804 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 116

Conread position: 68-367
Cow position: chr11:7319174-7318882 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 81

Conread position: 74-367
Cow position: chr11:42517489-42517211 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 50

Conread position: 80-367
Cow position: chr11:13062263-13062549 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 166

Conread position: 85-373
Cow position: chr11:66732266-66731984 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 86-371
Cow position: chr11:26400618-26400338 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 5

Conread position: 99-367
Cow position: chr11:26534957-26534691 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 38

Conread position: 100-338
Cow position: chr11:32977877-32978111 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 138

Conread position: 102-374
Cow position: chr11:50833637-50833908 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 144

Conread position: 102-374
Cow position: chr11:59444424-59444695 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 102-374
Cow position: chr11:59583552-59583281 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 102-374
Cow position: chr11:63652555-63652824 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 107-361
Cow position: chr11:38793694-38793451 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 40

Conread position: 109-366
Cow position: chr11:30190861-30190612 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 32

Conread position: 112-374
Cow position: chr11:18147518-18147776 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 115-310
Cow position: chr11:15128889-15128695 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 102

Conread position: 120-373
Cow position: chr11:52463393-52463134 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 73

Conread position: 129-374
Cow position: chr11:29614487-29614243 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 43, 114

Conread position: 133-374
Cow position: chr11:25864525-25864752 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 135-374
Cow position: chr11:81316791-81317025 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 87

Conread position: 147-356
Cow position: chr11:31487301-31487101 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 65

Conread position: 148-371
Cow position: chr11:52128285-52128063 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 98

Conread position: 151-302
Cow position: chr11:41164373-41164225 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 95

Conread position: 152-358
Cow position: chr11:67954057-67954254 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 44

Conread position: 156-367
Cow position: chr11:65852090-65852299 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 5

Conread position: 161-360
Cow position: chr11:41177979-41177784 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 51

Conread position: 161-374
Cow position: chr11:57185428-57185216 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 85

Conread position: 165-374
Cow position: chr11:10043024-10043232 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 81

Conread position: 165-374
Cow position: chr11:44516120-44516318 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 152, 14

Conread position: 171-374
Cow position: chr11:32477760-32477961 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 141, 74

Conread position: 171-374
Cow position: chr11:64353270-64353471 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 146, 74

Conread position: 179-370
Cow position: chr11:18438991-18438803 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 66

Conread position: 180-374
Cow position: chr11:23896563-23896371 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 132, 65

Conread position: 184-372
Cow position: chr11:8266854-8266669 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 63

Conread position: 186-367
Cow position: chr11:60756942-60757117 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 50

Conread position: 187-373
Cow position: chr11:8494538-8494354 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 125, 58

Conread position: 188-371
Cow position: chr11:4396761-4396936 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 34

Conread position: 205-371
Cow position: chr11:33319101-33319265 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 33

Conread position: 226-364
Cow position: chr11:19271267-19271404 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 20

Conread position: 254-372
Cow position: chr11:14650744-14650624 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 264-371
Cow position: chr11:24873011-24873120 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 264-374
Cow position: chr11:79748919-79749031 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 264-375
Cow position: chr11:11996966-11997074 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.