Cow genome map

Conread name: Pig2-33D08

Conread position: 1-371
Cow position: chr21:10570972-10570604 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 11

Conread position: 3-375
Cow position: chr21:33983588-33983962 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 162

Conread position: 4-308
Cow position: chr21:470975-470671 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 4-369
Cow position: chr21:23548579-23548940 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 122

Conread position: 5-367
Cow position: chr21:31276025-31275665 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 199

Conread position: 7-355
Cow position: chr21:20910750-20911092 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 15, 157

Conread position: 7-360
Cow position: chr21:4191975-4191623 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 113

Conread position: 7-367
Cow position: chr21:45790785-45790430 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 111

Conread position: 7-370
Cow position: chr21:23500994-23501357 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 185

Conread position: 7-374
Cow position: chr21:44804899-44805250 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 36

Conread position: 7-374
Cow position: chr21:47429024-47428657 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 91

Conread position: 7-375
Cow position: chr21:36977258-36977618 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 8-285
Cow position: chr21:13090116-13090375 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 163, 18

Conread position: 8-290
Cow position: chr21:28988963-28988692 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 170

Conread position: 8-301
Cow position: chr21:1058150-1057851 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 247

Conread position: 8-307
Cow position: chr21:34142060-34142346 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 35

Conread position: 8-310
Cow position: chr21:9010425-9010728 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 239

Conread position: 8-310
Cow position: chr21:15585045-15585327 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 15, 134

Conread position: 8-310
Cow position: chr21:18786834-18787129 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 8-330
Cow position: chr21:4079694-4079382 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 166, 14

Conread position: 8-335
Cow position: chr21:37147098-37147427 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 245

Conread position: 8-344
Cow position: chr21:33934234-33934561 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 173

Conread position: 8-346
Cow position: chr21:46974054-46974388 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 84

Conread position: 8-353
Cow position: chr21:30627402-30627744 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 8-356
Cow position: chr21:2419877-2419531 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 163

Conread position: 8-357
Cow position: chr21:21027139-21026805 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 38

Conread position: 8-357
Cow position: chr21:47532413-47532064 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 8-359
Cow position: chr21:36163606-36163962 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 111

Conread position: 8-360
Cow position: chr21:2905113-2905461 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 182

Conread position: 8-360
Cow position: chr21:22855577-22855241 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 8-365
Cow position: chr21:45782055-45782402 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 33

Conread position: 8-366
Cow position: chr21:81424-81069 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 8-366
Cow position: chr21:2293501-2293860 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 8-367
Cow position: chr21:48262493-48262137 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 8-369
Cow position: chr21:44219357-44218998 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 8-369
Cow position: chr21:47360491-47360850 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 178

Conread position: 8-371
Cow position: chr21:2768158-2768526 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 200

Conread position: 8-371
Cow position: chr21:4559393-4559752 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 206

Conread position: 8-371
Cow position: chr21:4585998-4586362 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 8-371
Cow position: chr21:12153494-12153141 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 8-371
Cow position: chr21:25156959-25156617 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 8-371
Cow position: chr21:28259341-28258987 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 195

Conread position: 8-371
Cow position: chr21:31512591-31512953 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 186

Conread position: 8-371
Cow position: chr21:46830885-46831251 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 8-371
Cow position: chr21:48291677-48292034 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 8-372
Cow position: chr21:22463872-22463507 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 100

Conread position: 8-372
Cow position: chr21:34254915-34255262 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 14

Conread position: 8-373
Cow position: chr21:2537489-2537843 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 15, 54

Conread position: 8-373
Cow position: chr21:4189222-4188853 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 242

Conread position: 8-373
Cow position: chr21:9896037-9895677 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 220

Conread position: 8-373
Cow position: chr21:18285485-18285121 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 8-373
Cow position: chr21:27125038-27125403 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 221

Conread position: 8-373
Cow position: chr21:33728787-33728423 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 211

Conread position: 8-374
Cow position: chr21:8071417-8071783 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 207

Conread position: 8-374
Cow position: chr21:33965051-33965405 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 66

Conread position: 8-374
Cow position: chr21:39417754-39417391 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 186

Conread position: 8-376
Cow position: chr21:27375800-27375416 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 221

Conread position: 9-363
Cow position: chr21:37323122-37323473 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 242

Conread position: 9-371
Cow position: chr21:5009790-5010151 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 239

Conread position: 10-360
Cow position: chr21:17478744-17478404 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 165, 29

Conread position: 10-369
Cow position: chr21:42460395-42460738 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 49

Conread position: 10-371
Cow position: chr21:20243922-20244283 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 237

Conread position: 10-374
Cow position: chr21:48530849-48530482 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 220

Conread position: 11-366
Cow position: chr21:13704334-13704688 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 9, 225

Conread position: 11-369
Cow position: chr21:29423735-29423382 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 53

Conread position: 11-371
Cow position: chr21:17721255-17720901 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 117

Conread position: 11-374
Cow position: chr21:13735485-13735845 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 137

Conread position: 11-374
Cow position: chr21:19627033-19627393 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 78

Conread position: 11-374
Cow position: chr21:48273521-48273883 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 235

Conread position: 12-371
Cow position: chr21:25190328-25189967 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 229

Conread position: 12-371
Cow position: chr21:43403762-43404120 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 211

Conread position: 12-372
Cow position: chr21:4722314-4721973 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 125

Conread position: 14-367
Cow position: chr21:3253307-3252946 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 65

Conread position: 14-367
Cow position: chr21:48234645-48234980 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 127

Conread position: 14-371
Cow position: chr21:47649015-47648657 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 139

Conread position: 15-367
Cow position: chr21:18851044-18851388 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 159, 41

Conread position: 15-371
Cow position: chr21:21966841-21966499 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 159, 27

Conread position: 16-301
Cow position: chr21:36892561-36892843 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 46, 52

Conread position: 16-310
Cow position: chr21:2503413-2503123 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 158, 72

Conread position: 16-310
Cow position: chr21:9208980-9208693 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 158, 180

Conread position: 16-315
Cow position: chr21:23329672-23329968 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 230

Conread position: 16-315
Cow position: chr21:47168631-47168335 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 156, 230

Conread position: 16-332
Cow position: chr21:31950087-31949775 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 156, 230

Conread position: 16-338
Cow position: chr21:28476964-28476652 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 107

Conread position: 16-346
Cow position: chr21:37298811-37298486 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 16-352
Cow position: chr21:16278073-16277737 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 82

Conread position: 16-359
Cow position: chr21:15546020-15546359 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 119

Conread position: 16-360
Cow position: chr21:4719149-4719492 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 16-360
Cow position: chr21:30966272-30966615 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 146

Conread position: 16-362
Cow position: chr21:11144179-11144524 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-364
Cow position: chr21:34684701-34684373 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 156, 81

Conread position: 16-365
Cow position: chr21:6965801-6966149 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-366
Cow position: chr21:26757052-26757401 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-367
Cow position: chr21:1196208-1195859 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 84

Conread position: 16-367
Cow position: chr21:27263352-27263012 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 16-367
Cow position: chr21:33257227-33256877 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 227

Conread position: 16-369
Cow position: chr21:33832305-33832660 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 16-371
Cow position: chr21:149818-149464 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr21:2878168-2878519 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 16-371
Cow position: chr21:3046995-3046656 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 26

Conread position: 16-371
Cow position: chr21:3766096-3766452 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 233

Conread position: 16-371
Cow position: chr21:3782443-3782090 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 113

Conread position: 16-371
Cow position: chr21:4812673-4813020 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 207

Conread position: 16-371
Cow position: chr21:10853936-10853582 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr21:17435330-17435681 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 101, 90

Conread position: 16-371
Cow position: chr21:22719429-22719780 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 127

Conread position: 16-371
Cow position: chr21:26400098-26400447 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 211

Conread position: 16-371
Cow position: chr21:27065928-27066282 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr21:27287644-27287296 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 67

Conread position: 16-371
Cow position: chr21:27608031-27608383 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr21:28915305-28915658 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 229

Conread position: 16-371
Cow position: chr21:30595419-30595773 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr21:33316695-33317049 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 223

Conread position: 16-371
Cow position: chr21:33709829-33710182 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 226

Conread position: 16-371
Cow position: chr21:37923847-37923504 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 16-371
Cow position: chr21:39059659-39060002 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 84

Conread position: 16-372
Cow position: chr21:17144359-17144004 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-372
Cow position: chr21:40618272-40618627 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 155, 230

Conread position: 16-374
Cow position: chr21:2514518-2514165 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 79

Conread position: 16-374
Cow position: chr21:5642166-5642522 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 232

Conread position: 16-374
Cow position: chr21:7047511-7047865 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 142

Conread position: 16-374
Cow position: chr21:11509612-11509255 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 16-374
Cow position: chr21:19351190-19351547 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr21:23341322-23340965 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:25598335-25597987 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 69

Conread position: 16-374
Cow position: chr21:26633559-26633915 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr21:26875262-26874906 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 185

Conread position: 16-374
Cow position: chr21:27147881-27148237 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 16-374
Cow position: chr21:30298150-30297792 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:32238010-32237653 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:32396360-32396710 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 16-374
Cow position: chr21:32773606-32773249 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:34823847-34823490 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:34900003-34900360 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-374
Cow position: chr21:36376652-36376304 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 128

Conread position: 16-374
Cow position: chr21:36506168-36506524 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 205

Conread position: 16-374
Cow position: chr21:38865941-38866298 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 16-374
Cow position: chr21:39470093-39470451 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 202

Conread position: 16-374
Cow position: chr21:41796054-41796407 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 186

Conread position: 16-374
Cow position: chr21:42917464-42917107 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr21:47977938-47977581 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 226

Conread position: 17-367
Cow position: chr21:13302865-13302527 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 286, 125

Conread position: 17-367
Cow position: chr21:49655513-49655862 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 230

Conread position: 17-371
Cow position: chr21:34657661-34657312 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 112

Conread position: 19-367
Cow position: chr21:27342736-27343077 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 9

Conread position: 20-365
Cow position: chr21:17415176-17415510 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 113, 80

Conread position: 20-365
Cow position: chr21:22316190-22315854 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 194, 7

Conread position: 22-372
Cow position: chr21:30565410-30565070 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 191

Conread position: 23-237
Cow position: chr21:17207844-17207627 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 16, 201

Conread position: 23-367
Cow position: chr21:19969898-19969555 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 92, 195

Conread position: 23-371
Cow position: chr21:4732876-4733214 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 289, 155

Conread position: 23-371
Cow position: chr21:5020806-5020463 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 72

Conread position: 23-371
Cow position: chr21:19965268-19964927 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 207, 104

Conread position: 23-371
Cow position: chr21:24826467-24826817 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 103, 192

Conread position: 23-371
Cow position: chr21:28881332-28880989 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 163

Conread position: 23-371
Cow position: chr21:36534544-36534891 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 223

Conread position: 23-374
Cow position: chr21:16890176-16890528 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 223

Conread position: 26-346
Cow position: chr21:7156034-7155730 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 57

Conread position: 27-371
Cow position: chr21:45362-45020 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 185, 101

Conread position: 27-371
Cow position: chr21:31252646-31252307 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 28-359
Cow position: chr21:6623471-6623143 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 15

Conread position: 28-359
Cow position: chr21:29500196-29499867 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 21

Conread position: 28-366
Cow position: chr21:26479865-26480199 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 291, 141

Conread position: 28-367
Cow position: chr21:6765363-6765704 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 28-373
Cow position: chr21:28598248-28597907 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 14

Conread position: 32-360
Cow position: chr21:18931829-18931507 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 104, 89

Conread position: 33-374
Cow position: chr21:4035629-4035949 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 279, 64

Conread position: 34-372
Cow position: chr21:13300470-13300145 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 66

Conread position: 35-309
Cow position: chr21:18818981-18819255 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 201, 144

Conread position: 35-346
Cow position: chr21:39400887-39400577 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 125

Conread position: 35-356
Cow position: chr21:18791783-18792107 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 35-371
Cow position: chr21:5630376-5630701 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 36-371
Cow position: chr21:32534471-32534146 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 62

Conread position: 43-307
Cow position: chr21:4567591-4567335 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 26

Conread position: 47-374
Cow position: chr21:14534253-14533927 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 175

Conread position: 49-367
Cow position: chr21:29253555-29253871 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 196

Conread position: 49-371
Cow position: chr21:25987052-25986735 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 81

Conread position: 56-360
Cow position: chr21:38450364-38450653 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 155, 0

Conread position: 56-374
Cow position: chr21:4898333-4898650 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 190

Conread position: 56-374
Cow position: chr21:27619880-27620186 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 256, 55

Conread position: 60-367
Cow position: chr21:18846709-18847013 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 138

Conread position: 60-367
Cow position: chr21:32573608-32573300 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 164

Conread position: 67-372
Cow position: chr21:30354474-30354175 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 105, 26

Conread position: 68-307
Cow position: chr21:28616874-28616649 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 145

Conread position: 69-368
Cow position: chr21:27522211-27522500 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 103, 153

Conread position: 69-374
Cow position: chr21:15274958-15274656 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 176

Conread position: 73-367
Cow position: chr21:30192949-30193241 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 99, 47

Conread position: 79-336
Cow position: chr21:38027227-38026970 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 163

Conread position: 85-371
Cow position: chr21:33420374-33420651 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 117

Conread position: 98-311
Cow position: chr21:22092928-22092711 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 152

Conread position: 99-367
Cow position: chr21:14727272-14727012 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 76, 38

Conread position: 100-308
Cow position: chr21:1284360-1284564 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 125

Conread position: 101-361
Cow position: chr21:13315033-13314777 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 66

Conread position: 102-374
Cow position: chr21:11405295-11405566 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 102-374
Cow position: chr21:39428987-39428716 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 103-301
Cow position: chr21:36892872-36893068 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 144

Conread position: 117-371
Cow position: chr21:2664595-2664848 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 19

Conread position: 121-371
Cow position: chr21:19099013-19098767 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 108

Conread position: 130-373
Cow position: chr21:25472753-25472515 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 189, 12

Conread position: 131-371
Cow position: chr21:3804225-3804463 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 43, 91

Conread position: 152-368
Cow position: chr21:17480836-17480629 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 66

Conread position: 161-368
Cow position: chr21:44292767-44292973 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 29

Conread position: 165-371
Cow position: chr21:15398653-15398450 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 45

Conread position: 165-374
Cow position: chr21:8419573-8419371 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 79

Conread position: 167-363
Cow position: chr21:39763741-39763546 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 29

Conread position: 171-374
Cow position: chr21:34180583-34180783 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 146, 39

Conread position: 189-374
Cow position: chr21:449666-449482 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 57

Conread position: 191-371
Cow position: chr21:37122919-37123098 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 51

Conread position: 195-366
Cow position: chr21:48638779-48638949 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 50

Conread position: 227-367
Cow position: chr21:4283095-4283233 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 16

Conread position: 250-374
Cow position: chr21:37374646-37374525 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 31

Conread position: 256-371
Cow position: chr21:28476373-28476490 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.