Cow genome map

Conread name: Pig2-33D08

Conread position: 2-371
Cow position: chr27:5925769-5925411 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 44

Conread position: 3-371
Cow position: chr27:13901629-13901262 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 118

Conread position: 7-361
Cow position: chr27:31249733-31249390 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 60

Conread position: 7-372
Cow position: chr27:15272572-15272931 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 138

Conread position: 8-355
Cow position: chr27:21350348-21350004 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 236

Conread position: 8-358
Cow position: chr27:25784263-25784602 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 8-360
Cow position: chr27:1189163-1188815 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 205

Conread position: 8-360
Cow position: chr27:6523779-6524129 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 105

Conread position: 8-365
Cow position: chr27:15406123-15405772 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 93

Conread position: 8-367
Cow position: chr27:1502011-1501667 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 8-367
Cow position: chr27:13317056-13316705 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 91

Conread position: 8-367
Cow position: chr27:21283745-21284092 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 202

Conread position: 8-371
Cow position: chr27:1536671-1536308 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 238

Conread position: 8-371
Cow position: chr27:11434667-11434313 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 60

Conread position: 8-373
Cow position: chr27:11256186-11256529 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 165, 236

Conread position: 8-374
Cow position: chr27:25800710-25801070 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 61

Conread position: 9-352
Cow position: chr27:20765232-20764904 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 10-360
Cow position: chr27:15871833-15872170 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 58

Conread position: 10-371
Cow position: chr27:2557495-2557853 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 10-371
Cow position: chr27:26785314-26784960 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 32

Conread position: 10-371
Cow position: chr27:27557297-27556944 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 11-374
Cow position: chr27:2001342-2000981 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 224

Conread position: 11-374
Cow position: chr27:8959519-8959894 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 235

Conread position: 12-371
Cow position: chr27:27291890-27291527 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 14-371
Cow position: chr27:3990306-3990662 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 14-374
Cow position: chr27:17565148-17565499 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 15-373
Cow position: chr27:14380796-14380440 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 127

Conread position: 16-325
Cow position: chr27:10306599-10306302 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 26

Conread position: 16-358
Cow position: chr27:2682012-2681674 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-360
Cow position: chr27:11481423-11481080 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-361
Cow position: chr27:5990558-5990898 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 158, 45

Conread position: 16-364
Cow position: chr27:9970663-9970316 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 230

Conread position: 16-367
Cow position: chr27:4824309-4823969 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 16-371
Cow position: chr27:8972936-8972582 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 223

Conread position: 16-371
Cow position: chr27:9333159-9332816 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 187

Conread position: 16-371
Cow position: chr27:15033399-15033753 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr27:15633851-15634204 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 170

Conread position: 16-371
Cow position: chr27:15870525-15870872 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 138

Conread position: 16-371
Cow position: chr27:19423886-19424239 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 37

Conread position: 16-371
Cow position: chr27:19523218-19523570 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 37

Conread position: 16-371
Cow position: chr27:19932065-19932428 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 51

Conread position: 16-371
Cow position: chr27:20810908-20810559 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-371
Cow position: chr27:24295768-24296131 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 231

Conread position: 16-371
Cow position: chr27:26330424-26330070 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-372
Cow position: chr27:8201427-8201075 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr27:165428-165784 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 86

Conread position: 16-374
Cow position: chr27:1521166-1520815 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 167

Conread position: 16-374
Cow position: chr27:3653208-3653565 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 16-374
Cow position: chr27:5983538-5983895 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 16-374
Cow position: chr27:10579435-10579082 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 72

Conread position: 16-374
Cow position: chr27:12006640-12006283 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 217

Conread position: 16-374
Cow position: chr27:13353798-13353441 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chr27:14297699-14297342 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 230

Conread position: 16-374
Cow position: chr27:16030905-16031262 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 230

Conread position: 16-374
Cow position: chr27:22797167-22797522 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 223

Conread position: 16-374
Cow position: chr27:29035890-29036245 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 227

Conread position: 16-374
Cow position: chr27:30306774-30307134 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 233

Conread position: 17-301
Cow position: chr27:12239558-12239278 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 104

Conread position: 17-360
Cow position: chr27:2331994-2331652 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 17-367
Cow position: chr27:4828986-4828642 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 17-371
Cow position: chr27:344439-344785 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 229

Conread position: 17-371
Cow position: chr27:4331248-4331602 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 18-346
Cow position: chr27:15866814-15867132 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 10

Conread position: 23-309
Cow position: chr27:25112640-25112364 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 141, 21

Conread position: 23-367
Cow position: chr27:5914412-5914075 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 23-367
Cow position: chr27:14669675-14669339 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 5

Conread position: 23-371
Cow position: chr27:3232049-3232396 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 223

Conread position: 23-371
Cow position: chr27:27930682-27930346 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 121

Conread position: 23-377
Cow position: chr27:30036357-30036002 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 226

Conread position: 24-371
Cow position: chr27:8427335-8426995 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 88

Conread position: 25-367
Cow position: chr27:21392493-21392154 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 220

Conread position: 28-367
Cow position: chr27:4805270-4804930 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 147, 206

Conread position: 28-371
Cow position: chr27:4982852-4982510 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 218

Conread position: 31-371
Cow position: chr27:27729014-27729349 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 105

Conread position: 35-371
Cow position: chr27:8291314-8290981 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 42-371
Cow position: chr27:16787832-16788153 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 204

Conread position: 47-371
Cow position: chr27:22647171-22647494 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 199

Conread position: 51-357
Cow position: chr27:8592843-8592538 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 120, 200

Conread position: 55-367
Cow position: chr27:17568548-17568243 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 87, 143

Conread position: 56-371
Cow position: chr27:15349107-15348800 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 18

Conread position: 56-374
Cow position: chr27:1081711-1082027 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 103

Conread position: 57-374
Cow position: chr27:26551941-26552248 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 157

Conread position: 67-359
Cow position: chr27:27045615-27045327 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 69

Conread position: 78-371
Cow position: chr27:27279144-27278849 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 144

Conread position: 81-367
Cow position: chr27:15375230-15374956 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 231, 93

Conread position: 84-372
Cow position: chr27:8429435-8429140 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 35

Conread position: 89-337
Cow position: chr27:1588500-1588259 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 45

Conread position: 97-375
Cow position: chr27:25971189-25971469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 92

Conread position: 102-374
Cow position: chr27:13309050-13308779 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 122-371
Cow position: chr27:25885208-25884969 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 52, 37

Conread position: 137-309
Cow position: chr27:26644890-26645053 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 85

Conread position: 149-338
Cow position: chr27:9989843-9990032 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 73

Conread position: 155-310
Cow position: chr27:24055058-24054909 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 90

Conread position: 161-329
Cow position: chr27:27469187-27469352 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 51

Conread position: 170-374
Cow position: chr27:21203872-21204073 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 29

Conread position: 171-371
Cow position: chr27:8262105-8261909 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 139, 29

Conread position: 171-374
Cow position: chr27:15544351-15544150 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 141, 71

Conread position: 198-371
Cow position: chr27:12750334-12750163 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 42

Conread position: 253-374
Cow position: chr27:29811585-29811462 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 264-374
Cow position: chr27:19488251-19488139 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 264-374
Cow position: chr27:20716552-20716664 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.